RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 VPS25Q9BRG1 176 aa2.36□□□□□ -2.03
GPNMB-212ENST00000487890 CCDC90BQ9GZT6 254 aa2.36□□□□□ -2.03
GPNMB-212ENST00000487890 FGF23Q9GZV9 251 aaPredicted RBP2.36□□□□□ -2.03
GPNMB-212ENST00000487890 CHST6Q9GZX3 395 aa2.36□□□□□ -2.03
GPNMB-212ENST00000487890 ARV1Q9H2C2 271 aa2.36□□□□□ -2.03
GPNMB-212ENST00000487890 OR51I2Q9H344 312 aa2.36□□□□□ -2.03
GPNMB-212ENST00000487890 FAM206AQ9NX38 181 aa2.36□□□□□ -2.03
GPNMB-212ENST00000487890 ZNRD1Q9P1U0 126 aa2.36□□□□□ -2.03
GPNMB-212ENST00000487890 KAAG1Q9UBP8 84 aa2.36□□□□□ -2.03
GPNMB-212ENST00000487890 SHPKQ9UHJ6 478 aa2.36□□□□□ -2.03
GPNMB-212ENST00000487890 NUFIP1Q9UHK0 495 aaKnown RBP2.36□□□□□ -2.03
GPNMB-212ENST00000487890 HHLA2Q9UM44 414 aa2.36□□□□□ -2.03
GPNMB-212ENST00000487890 SIGLEC9Q9Y336 463 aa2.36□□□□□ -2.03
GPNMB-212ENST00000487890 UFC1Q9Y3C8 167 aa2.36□□□□□ -2.03
GPNMB-212ENST00000487890 AP4S1Q9Y587 144 aa2.36□□□□□ -2.03
GPNMB-212ENST00000487890 R4GMQ9 66 aa2.36□□□□□ -2.03
GPNMB-212ENST00000487890 NBEAL2Q6ZNJ1 2754 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 DAPL1A0PJW8 107 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 J3QLW9 94 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 K7EP13 123 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 GABRPO00591 440 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 PHOX2AO14813 284 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 MMP23AO75900 390 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 PTTG1O95997 202 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 MT-CO2P00403 227 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 HLA-AP01891 365 aaKnown RBP2.35□□□□□ -2.03
GPNMB-212ENST00000487890 TTRP02766 147 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 LIMS3P0CW19 117 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 LIMS4P0CW20 117 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 PGA5P0DJD9 388 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 ZNF728P0DKX0 622 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 C8orf88P0DMB2 117 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 OR5H8P0DN80 308 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 CCL3L1P16619 93 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 ZNF19P17023 458 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 ZNF25P17030 456 aaPredicted RBP2.35□□□□□ -2.03
GPNMB-212ENST00000487890 CELP19835 753 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 RAB3AP20336 220 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 S100GP29377 79 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 SLC6A1P30531 599 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 VEGFCP49767 419 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 OR12D2P58182 307 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 CDC42P60953 191 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 RAB2AP61019 212 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 UNC119Q13432 240 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 HERPUD1Q15011 391 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 TPTE2P1Q5T6R2 138 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 UBE2UQ5VVX9 321 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 NXNL2Q5VZ03 156 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 KDM4DQ6B0I6 523 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 ELP2Q6IA86 826 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 BAIAP2L2Q6UXY1 529 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 LYG1Q8N1E2 194 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 C14orf178Q8N769 122 aaPredicted RBP2.35□□□□□ -2.03
GPNMB-212ENST00000487890 ZNF676Q8N7Q3 588 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 C20orf203Q8NBC4 194 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 LY6G5BQ8NDX9 201 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 OR10G9Q8NGN4 311 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 OR10J6PQ8NGY7 276 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 LINC01006Q8NI28 216 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 COQ8AQ8NI60 647 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 RPS4Y2Q8TD47 263 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 HAVCR2Q8TDQ0 301 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 TNFAIP8L1Q8WVP5 186 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 AQP3Q92482 292 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 FAM3DQ96BQ1 224 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 BORCS8Q96FH0 119 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 SPACA5Q96QH8 159 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 NRIP2Q9BQI9 281 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 AGMATQ9BSE5 352 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 GGACTQ9BVM4 153 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 PECRQ9BY49 303 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 KRTAP1-5Q9BYS1 174 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 ABCG5Q9H222 651 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 MIXL1Q9H2W2 232 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 PLSCR3Q9NRY6 295 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 RBFOX1Q9NWB1 397 aaKnown RBP2.35□□□□□ -2.03
GPNMB-212ENST00000487890 MCUBQ9NWR8 336 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 RASL12Q9NYN1 266 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 GLS2Q9UI32 602 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 HILPDAQ9Y5L2 63 aa2.35□□□□□ -2.03
GPNMB-212ENST00000487890 TRGV10A0A0A0MS01 117 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 hADV38S2A0JD32 116 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 ANKRD20A5PA0PJZ0 165 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 SEC14L6B5MCN3 397 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 H7C1H1 209 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 GPR31O00270 319 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 HAND1O96004 215 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 PRB2P02812 416 aaPredicted RBP2.34□□□□□ -2.03
GPNMB-212ENST00000487890 EIF4EP06730 217 aaKnown RBP2.34□□□□□ -2.03
GPNMB-212ENST00000487890 OR10J4P0C629 311 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 ATF1P18846 271 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 PVALBP20472 110 aaPredicted RBP2.34□□□□□ -2.03
GPNMB-212ENST00000487890 NFYBP25208 207 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 MT3P25713 68 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 ERP29P30040 261 aaKnown RBP2.34□□□□□ -2.03
GPNMB-212ENST00000487890 POLR2IP36954 125 aaKnown RBP2.34□□□□□ -2.03
GPNMB-212ENST00000487890 SERPINB10P48595 397 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 RBP2P50120 134 aa2.34□□□□□ -2.03
GPNMB-212ENST00000487890 KRTAP10-3P60369 221 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 244.5 ms