RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 DHFRP00374 187 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 APOC1P02654 83 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 C1QAP02745 245 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 G6PCP35575 357 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 EMP1P54849 157 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 RAB4BP61018 213 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 TMEM78Q5T7P6 136 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 C12orf57Q99622 126 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 PBDC1Q9BVG4 233 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 CHST6Q9GZX3 395 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 RNF122Q9H9V4 155 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 SMARCA4P51532 1647 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 NUP210LQ5VU65 1888 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 BCL9O00512 1426 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 USP24Q9UPU5 2620 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 DOCK4Q8N1I0 1966 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 TRAV38-1A0A0B4J264 116 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 IGHV1-18A0A0C4DH31 117 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 MAP1LC3B2A6NCE7 125 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 EFCAB10A6NFE3 127 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 TSTD3H0UI37 97 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 TRAPPC2LH3BP13 241 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 J3QRK9 145 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 ORC5O43913 435 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 SULT1C4O75897 302 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 OR2J2O76002 312 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 NAPSAO96009 420 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 IFNA7P01567 189 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 PAEPP09466 180 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 RPS4Y1P22090 263 aaKnown RBP1.89□□□□□ -2.11
SRRM1-213ENST00000485441 HLA-DMBP28068 263 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 CASP1P29466 404 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 GLRXP35754 106 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 RPL35P42766 123 aaKnown RBP1.89□□□□□ -2.11
SRRM1-213ENST00000485441 EVX1P49640 407 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 ZNF80P51504 273 aaPredicted RBP1.89□□□□□ -2.11
SRRM1-213ENST00000485441 AKR1D1P51857 326 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 PIGPP57054 158 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 HIST1H4AP62805 103 aaKnown RBP1.89□□□□□ -2.11
SRRM1-213ENST00000485441 RPL18Q07020 188 aaKnown RBP1.89□□□□□ -2.11
SRRM1-213ENST00000485441 RHEBQ15382 184 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 EXOC3-AS1Q8N2X6 119 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 OR5H6Q8NGV6 325 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 GRPEL2Q8TAA5 225 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 LYSMD1Q96S90 227 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 SERPINI1Q99574 410 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 TMEM70Q9BUB7 260 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 MAP1LC3BQ9GZQ8 125 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 CR1P17927 2039 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 BLMP54132 1417 aaPredicted RBP1.89□□□□□ -2.11
SRRM1-213ENST00000485441 FMN1Q68DA7 1419 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 ANKRD50Q9ULJ7 1429 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 PDE4DIPQ5VU43 2346 aa1.89□□□□□ -2.11
SRRM1-213ENST00000485441 SHANK2Q9UPX8 1470 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 ZNF462Q96JM2 2506 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 ABCA5Q8WWZ7 1642 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 CCDC88CQ9P219 2028 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 RTL9Q8NET4 1388 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 ZMYM4Q5VZL5 1548 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 RP1L1Q8IWN7 2480 aaPredicted RBP1.88□□□□□ -2.11
SRRM1-213ENST00000485441 COL4A1P02462 1669 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 A0A1B0GV90 55 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 GGT3PA6NGU5 568 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 FABP5P3A8MUU1 101 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 FAM25AB3EWG3 89 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 FAM25CB3EWG5 89 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 FAM25GB3EWG6 89 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 BUB1B-PAK6H3BSN5 160 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 H7C2G1 150 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 C1QCP02747 245 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 MSMBP08118 114 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 COPZ1P61923 177 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 DCUN1D2Q6PH85 259 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 LCA10Q71F78 164 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 C4orf33Q8N1A6 199 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 FAM24BQ8N5W8 94 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 OR13D1Q8NGV5 346 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 ZNF625Q96I27 306 aaPredicted RBP1.88□□□□□ -2.11
SRRM1-213ENST00000485441 HSPB9Q9BQS6 159 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 IMUPQ9GZP8 106 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 PBOV1Q9GZY1 135 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 COA4Q9NYJ1 87 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 VPS8Q8N3P4 1428 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 OBSL1O75147 1896 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 GOLGA3Q08378 1498 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 FANCD2Q9BXW9 1451 aa1.88□□□□□ -2.11
SRRM1-213ENST00000485441 HMGXB3Q12766 1538 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 IRGMA1A4Y4 181 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 FAM92AA1XBS5 289 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 PRORSD1PA6NEY8 169 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 CREBL2O60519 120 aaPredicted RBP1.87□□□□□ -2.11
SRRM1-213ENST00000485441 IGHV3-7P01780 117 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 CSN2P05814 226 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 S100PP25815 95 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 SRIP30626 198 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 DAPK1P53355 1430 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 CDC42P60953 191 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 TMEM258P61165 79 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 PSPHP78330 225 aa1.87□□□□□ -2.11
SRRM1-213ENST00000485441 SCGB2B2Q4G0G5 96 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms