RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 Q8N814 137 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 PRR26Q8N8Z3 221 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 OR56B1Q8NGI3 324 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 OR13F1Q8NGS4 319 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 RAB3CQ96E17 227 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 TMEM56Q96MV1 263 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 CENPOQ9BU64 300 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 FGF20Q9NP95 211 aaPredicted RBP3.55□□□□□ -1.84
PTPN4-210ENST00000485247 ZNF446Q9NWS9 450 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 PPP1R14DQ9NXH3 145 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 HSPB7Q9UBY9 170 aa3.55□□□□□ -1.84
PTPN4-210ENST00000485247 TRAV9-2A0A087WT02 112 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 A0A096LPF7 62 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 LRCOL1A6NCL2 159 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 GAGE12JA6NER3 117 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 MFNGO00587 321 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 RBFOX2O43251 390 aaKnown RBP eCLIP3.54□□□□□ -1.847e-8■□□□□ 11.2
PTPN4-210ENST00000485247 PSCAO43653 123 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 HTN1P15515 57 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 MYL12AP19105 171 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 MAPK3P27361 379 aaPredicted RBP3.54□□□□□ -1.84
PTPN4-210ENST00000485247 TNFSF8P32971 234 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 CLDN12P56749 244 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 ERVK-16P61578 105 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 TBCEQ15813 527 aaPredicted RBP3.54□□□□□ -1.84
PTPN4-210ENST00000485247 ZNF79Q15937 498 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 TPRA1Q86W33 373 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 OR51H1Q8NH63 302 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 RHOXF1Q8NHV9 184 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 COQ8AQ8NI60 647 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 NUDCD2Q8WVJ2 157 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 SECTM1Q8WVN6 248 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 IGF2BP2-AS1Q96M15 143 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 ABHD1Q96SE0 405 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 SCPEP1Q9HB40 452 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 PLGRKTQ9HBL7 147 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 NOP10Q9NPE3 64 aaKnown RBP3.54□□□□□ -1.84
PTPN4-210ENST00000485247 CCL28Q9NRJ3 127 aa3.54□□□□□ -1.84
PTPN4-210ENST00000485247 H3BNG1 76 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 M0R2Z0 102 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 SNAPC5O75971 98 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 KRASP01116 189 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 IGLV2-8P01709 118 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 CTXN2P0C2S0 81 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 TSPOP30536 169 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 CATR1Q13166 79 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 SPINK13Q1W4C9 94 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 TIGITQ495A1 244 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 EBLN2Q6P2I7 272 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 SIGLEC15Q6ZMC9 328 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 Q6ZS49 121 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 TMED4Q7Z7H5 227 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 CMTM1Q8IZ96 169 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 OR10J6PQ8NGY7 276 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 APH1BQ8WW43 257 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 DNAJC4Q9NNZ3 241 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 MRPL36Q9P0J6 103 aaKnown RBP3.53□□□□□ -1.84
PTPN4-210ENST00000485247 ELF5Q9UKW6 265 aaPredicted RBP3.53□□□□□ -1.84
PTPN4-210ENST00000485247 POMPQ9Y244 141 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 TIMM8BQ9Y5J9 83 aaPredicted RBP3.53□□□□□ -1.84
PTPN4-210ENST00000485247 ORC6Q9Y5N6 252 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 LY96Q9Y6Y9 160 aa3.53□□□□□ -1.84
PTPN4-210ENST00000485247 TRAV12-2A0A075B6T6 113 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 A0A0J9YX75 114 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 PRSS47A8MTI9 375 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 SLC17A2O00624 439 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 CRXO43186 299 aaPredicted RBP3.52□□□□□ -1.85
PTPN4-210ENST00000485247 CLN5O75503 358 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 GAGE7O76087 117 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 INSP01308 110 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 GAGE12FP0CL80 117 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 GAGE12GP0CL81 117 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 GAGE12IP0CL82 117 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 ELK1P19419 428 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 CALB2P22676 271 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 G6PCP35575 357 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 ID1P41134 155 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 RPL37AP61513 92 aaKnown RBP3.52□□□□□ -1.85
PTPN4-210ENST00000485247 RAB11BQ15907 218 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 C2orf76Q3KRA6 126 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 LINC01620Q4KN68 170 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 AADACL3Q5VUY0 350 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 SPATA31B1PQ5VZV4 182 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 AMTNQ6UX39 209 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 BAP18Q8IXM2 172 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 ZNF485Q8NCK3 441 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 BPIFB6Q8NFQ5 453 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 OR10R2Q8NGX6 335 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 CIRBP-AS1Q8TBR5 109 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 LGALS14Q8TCE9 139 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 TMEM170AQ8WVE7 144 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 PHYHIPQ92561 330 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 C16orf74Q96GX8 76 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 VSIG2Q96IQ7 327 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 LINC01587Q99440 93 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 GFI1Q99684 422 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 COMMD9Q9P000 198 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 PRNDQ9UKY0 176 aa3.52□□□□□ -1.85
PTPN4-210ENST00000485247 AK6Q9Y3D8 172 aaKnown RBP3.52□□□□□ -1.85
PTPN4-210ENST00000485247 AP4S1Q9Y587 144 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms