RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 GPR146Q96CH1 333 aa9□□□□□ -0.97
UBR4-213ENST00000483922 PDCD10Q9BUL8 212 aa9□□□□□ -0.97
UBR4-213ENST00000483922 TMED3Q9Y3Q3 217 aa9□□□□□ -0.97
UBR4-213ENST00000483922 IGKV1D-37A0A075B6S9 117 aa8.99□□□□□ -0.97
UBR4-213ENST00000483922 A0A0J9YX75 114 aa8.99□□□□□ -0.97
UBR4-213ENST00000483922 TEX48A0A1B0GUV7 120 aa8.99□□□□□ -0.97
UBR4-213ENST00000483922 CRXO43186 299 aaPredicted RBP8.99□□□□□ -0.97
UBR4-213ENST00000483922 HBE1P02100 147 aa8.99□□□□□ -0.97
UBR4-213ENST00000483922 SLC25A4P12235 298 aa8.99□□□□□ -0.97
UBR4-213ENST00000483922 AZU1P20160 251 aa8.99□□□□□ -0.97
UBR4-213ENST00000483922 RORCP51449 518 aa8.99□□□□□ -0.97
UBR4-213ENST00000483922 NEDD8Q15843 81 aa8.99□□□□□ -0.97
UBR4-213ENST00000483922 C15orf53Q8NAA6 179 aa8.99□□□□□ -0.97
UBR4-213ENST00000483922 OR52E5Q8NH55 327 aa8.99□□□□□ -0.97
UBR4-213ENST00000483922 RNASEH2CQ8TDP1 164 aaKnown RBP8.99□□□□□ -0.97
UBR4-213ENST00000483922 ZNF486Q96H40 463 aaPredicted RBP8.99□□□□□ -0.97
UBR4-213ENST00000483922 ACY3Q96HD9 319 aa8.99□□□□□ -0.97
UBR4-213ENST00000483922 ENY2Q9NPA8 101 aa8.99□□□□□ -0.97
UBR4-213ENST00000483922 HEYLQ9NQ87 328 aaPredicted RBP8.99□□□□□ -0.97
UBR4-213ENST00000483922 DMBT1Q9UGM3 2413 aaPredicted RBP8.99□□□□□ -0.97
UBR4-213ENST00000483922 RPS10-NUDT3A0A1W2PQS6 291 aa8.98□□□□□ -0.97
UBR4-213ENST00000483922 A8MTW9 85 aa8.98□□□□□ -0.97
UBR4-213ENST00000483922 ZNF705GA8MUZ8 300 aaPredicted RBP8.98□□□□□ -0.97
UBR4-213ENST00000483922 CDS2O95674 445 aa8.98□□□□□ -0.97
UBR4-213ENST00000483922 CD3DP04234 171 aa8.98□□□□□ -0.97
UBR4-213ENST00000483922 RCVRNP35243 200 aa8.98□□□□□ -0.97
UBR4-213ENST00000483922 LSM3P62310 102 aaKnown RBP8.98□□□□□ -0.97
UBR4-213ENST00000483922 ZNF90Q03938 601 aa8.98□□□□□ -0.97
UBR4-213ENST00000483922 MEF2DQ14814 521 aa8.98□□□□□ -0.97
UBR4-213ENST00000483922 RRN3P1Q2M238 152 aa8.98□□□□□ -0.97
UBR4-213ENST00000483922 TRIM16LQ309B1 348 aa8.98□□□□□ -0.97
UBR4-213ENST00000483922 CROCCP3Q8IVE0 287 aa8.98□□□□□ -0.97
UBR4-213ENST00000483922 SELENOHQ8IZQ5 122 aaKnown RBP8.98□□□□□ -0.97
UBR4-213ENST00000483922 GLYATL2Q8WU03 294 aa8.98□□□□□ -0.97
UBR4-213ENST00000483922 RNF125Q96EQ8 232 aa8.98□□□□□ -0.97
UBR4-213ENST00000483922 ATG101Q9BSB4 218 aa8.98□□□□□ -0.97
UBR4-213ENST00000483922 SCPEP1Q9HB40 452 aa8.98□□□□□ -0.97
UBR4-213ENST00000483922 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.98□□□□□ -0.97
UBR4-213ENST00000483922 GOLT1BQ9Y3E0 138 aa8.98□□□□□ -0.97
UBR4-213ENST00000483922 PSMB3P49720 205 aa8.97□□□□□ -0.97
UBR4-213ENST00000483922 RNASE12Q5GAN4 147 aaKnown RBP8.97□□□□□ -0.97
UBR4-213ENST00000483922 SLC24A4Q8NFF2 622 aa8.97□□□□□ -0.97
UBR4-213ENST00000483922 OR13C8Q8NGS7 320 aa8.97□□□□□ -0.97
UBR4-213ENST00000483922 YIPF6Q96EC8 236 aa8.97□□□□□ -0.97
UBR4-213ENST00000483922 RRNAD1Q96FB5 475 aaKnown RBP8.97□□□□□ -0.97
UBR4-213ENST00000483922 C7orf50Q9BRJ6 194 aaKnown RBP8.97□□□□□ -0.97
UBR4-213ENST00000483922 RTBDNQ9BSG5 229 aaPredicted RBP8.97□□□□□ -0.97
UBR4-213ENST00000483922 VCX3BQ9H321 246 aa8.97□□□□□ -0.97
UBR4-213ENST00000483922 COMMD3Q9UBI1 195 aa8.97□□□□□ -0.97
UBR4-213ENST00000483922 SCGB2A1O75556 95 aa8.96□□□□□ -0.98
UBR4-213ENST00000483922 NUDT3O95989 172 aa8.96□□□□□ -0.98
UBR4-213ENST00000483922 DEFB130BP0DP73 79 aa8.96□□□□□ -0.98
UBR4-213ENST00000483922 DEFB130AP0DP74 79 aa8.96□□□□□ -0.98
UBR4-213ENST00000483922 ALDH3B2P48448 385 aa8.96□□□□□ -0.98
UBR4-213ENST00000483922 NMSQ5H8A3 153 aa8.96□□□□□ -0.98
UBR4-213ENST00000483922 MARCH1Q8TCQ1 289 aa8.96□□□□□ -0.98
UBR4-213ENST00000483922 RNF141Q8WVD5 230 aa8.96□□□□□ -0.98
UBR4-213ENST00000483922 IGF2BP2-AS1Q96M15 143 aa8.96□□□□□ -0.98
UBR4-213ENST00000483922 PBDC1Q9BVG4 233 aa8.96□□□□□ -0.98
UBR4-213ENST00000483922 TMEM222Q9H0R3 208 aa8.96□□□□□ -0.98
UBR4-213ENST00000483922 MAGT1Q9H0U3 335 aa8.96□□□□□ -0.98
UBR4-213ENST00000483922 CACNG5Q9UF02 275 aa8.96□□□□□ -0.98
UBR4-213ENST00000483922 SRRM2Q9UQ35 2752 aaKnown RBP8.95□□□□□ -0.98
UBR4-213ENST00000483922 HPGDSO60760 199 aa8.95□□□□□ -0.98
UBR4-213ENST00000483922 ATG12O94817 140 aa8.95□□□□□ -0.98
UBR4-213ENST00000483922 APOA1P02647 267 aa8.95□□□□□ -0.98
UBR4-213ENST00000483922 OR5AC1P0C628 307 aa8.95□□□□□ -0.98
UBR4-213ENST00000483922 FUSP35637 526 aaKnown RBP eCLIP8.95□□□□□ -0.98
UBR4-213ENST00000483922 ID1P41134 155 aa8.95□□□□□ -0.98
UBR4-213ENST00000483922 GAMTQ14353 236 aa8.95□□□□□ -0.98
UBR4-213ENST00000483922 IGFL4Q6B9Z1 124 aa8.95□□□□□ -0.98
UBR4-213ENST00000483922 OR52I2Q8NH67 350 aa8.95□□□□□ -0.98
UBR4-213ENST00000483922 Q9H8V8 135 aa8.95□□□□□ -0.98
UBR4-213ENST00000483922 TEX13DA0A0J9YY54 714 aaPredicted RBP8.94□□□□□ -0.98
UBR4-213ENST00000483922 LYRM9A8MSI8 78 aa8.94□□□□□ -0.98
UBR4-213ENST00000483922 CEBPZOSA8MTT3 80 aa8.94□□□□□ -0.98
UBR4-213ENST00000483922 F5H768 121 aa8.94□□□□□ -0.98
UBR4-213ENST00000483922 GSTZ1O43708 216 aaPredicted RBP8.94□□□□□ -0.98
UBR4-213ENST00000483922 XGP55808 180 aa8.94□□□□□ -0.98
UBR4-213ENST00000483922 KLF9Q13886 244 aaPredicted RBP8.94□□□□□ -0.98
UBR4-213ENST00000483922 SPATA31B1PQ5VZV4 182 aa8.94□□□□□ -0.98
UBR4-213ENST00000483922 OR8G2PQ6IF36 304 aa8.94□□□□□ -0.98
UBR4-213ENST00000483922 SSX7Q7RTT5 188 aa8.94□□□□□ -0.98
UBR4-213ENST00000483922 TERB2Q8NHR7 220 aa8.94□□□□□ -0.98
UBR4-213ENST00000483922 COQ8AQ8NI60 647 aa8.94□□□□□ -0.98
UBR4-213ENST00000483922 UHRF2Q96PU4 802 aa8.94□□□□□ -0.98
UBR4-213ENST00000483922 ABHD1Q96SE0 405 aa8.94□□□□□ -0.98
UBR4-213ENST00000483922 PRR13Q9NZ81 148 aa8.94□□□□□ -0.98
UBR4-213ENST00000483922 COPZ2Q9P299 210 aa8.94□□□□□ -0.98
UBR4-213ENST00000483922 IGKV1OR2-108A0A075B7D4 117 aa8.93□□□□□ -0.98
UBR4-213ENST00000483922 TRAV8-2A0A0B4J237 113 aa8.93□□□□□ -0.98
UBR4-213ENST00000483922 M0R2Z0 102 aa8.93□□□□□ -0.98
UBR4-213ENST00000483922 ISLRO14498 428 aa8.93□□□□□ -0.98
UBR4-213ENST00000483922 INAFM2P0DMQ5 153 aa8.93□□□□□ -0.98
UBR4-213ENST00000483922 SUPT4H1P63272 117 aaKnown RBP8.93□□□□□ -0.98
UBR4-213ENST00000483922 SPINK13Q1W4C9 94 aa8.93□□□□□ -0.98
UBR4-213ENST00000483922 RNASE10Q5GAN6 216 aaKnown RBP8.93□□□□□ -0.98
UBR4-213ENST00000483922 C1orf194Q5T5A4 169 aa8.93□□□□□ -0.98
UBR4-213ENST00000483922 ETFRF1Q6IPR1 90 aa8.93□□□□□ -0.98
UBR4-213ENST00000483922 EBLN2Q6P2I7 272 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms