RNA–Protein interactions for RNA: ENST00000480548.5

SGIP1-209, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 5

Gene SGIP1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-209ENST00000480548 MYH11P35749 1972 aa3.36□□□□□ -1.87
SGIP1-209ENST00000480548 DOCK4Q8N1I0 1966 aa3.36□□□□□ -1.87
SGIP1-209ENST00000480548 CACNA1SQ13698 1873 aa3.35□□□□□ -1.87
SGIP1-209ENST00000480548 IGLV2-18A0A075B6J9 118 aa3.35□□□□□ -1.87
SGIP1-209ENST00000480548 PGLYRP1O75594 196 aaPredicted RBP3.35□□□□□ -1.87
SGIP1-209ENST00000480548 P0DMU3 169 aa3.35□□□□□ -1.87
SGIP1-209ENST00000480548 FAM231AP0DMU4 169 aa3.35□□□□□ -1.87
SGIP1-209ENST00000480548 FAM231CP0DMU5 169 aa3.35□□□□□ -1.87
SGIP1-209ENST00000480548 MYL5Q02045 173 aa3.35□□□□□ -1.87
SGIP1-209ENST00000480548 PABPC1L2AQ5JQF8 200 aa3.35□□□□□ -1.87
SGIP1-209ENST00000480548 C4orf22Q6V702 233 aa3.35□□□□□ -1.87
SGIP1-209ENST00000480548 SOSTDC1Q6X4U4 206 aa3.35□□□□□ -1.87
SGIP1-209ENST00000480548 PHF5AQ7RTV0 110 aaKnown RBP3.35□□□□□ -1.87
SGIP1-209ENST00000480548 ZNF714Q96N38 554 aa3.35□□□□□ -1.87
SGIP1-209ENST00000480548 AP1S3Q96PC3 154 aa3.35□□□□□ -1.87
SGIP1-209ENST00000480548 HHLA3Q9XRX5 114 aa3.35□□□□□ -1.87
SGIP1-209ENST00000480548 TRAPPC8Q9Y2L5 1435 aa3.35□□□□□ -1.87
SGIP1-209ENST00000480548 A0A096LPI6 279 aa3.34□□□□□ -1.87
SGIP1-209ENST00000480548 TRBV10-2A0A0K0K1G8 114 aa3.34□□□□□ -1.87
SGIP1-209ENST00000480548 LOC107984640A0A0U1RRK4 108 aa3.34□□□□□ -1.87
SGIP1-209ENST00000480548 C7orf71A4D174 169 aa3.34□□□□□ -1.87
SGIP1-209ENST00000480548 CCDC160A6NGH7 325 aa3.34□□□□□ -1.87
SGIP1-209ENST00000480548 M0R2Z0 102 aa3.34□□□□□ -1.87
SGIP1-209ENST00000480548 HIST1H2BKO60814 126 aa3.34□□□□□ -1.87
SGIP1-209ENST00000480548 HIST1H2BJP06899 126 aa3.34□□□□□ -1.87
SGIP1-209ENST00000480548 HTR1AP08908 422 aa3.34□□□□□ -1.87
SGIP1-209ENST00000480548 HLA-EP13747 358 aa3.34□□□□□ -1.87
SGIP1-209ENST00000480548 EVI2AP22794 236 aa3.34□□□□□ -1.87
SGIP1-209ENST00000480548 RPL35P42766 123 aaKnown RBP3.34□□□□□ -1.87
SGIP1-209ENST00000480548 PYDC2Q56P42 97 aa3.34□□□□□ -1.87
SGIP1-209ENST00000480548 FAM27BQ5VT28 67 aa3.34□□□□□ -1.87
SGIP1-209ENST00000480548 Q5XG85 94 aa3.34□□□□□ -1.87
SGIP1-209ENST00000480548 LRRC28Q86X40 367 aaPredicted RBP3.34□□□□□ -1.87
SGIP1-209ENST00000480548 KRTAP11-1Q8IUC1 163 aa3.34□□□□□ -1.87
SGIP1-209ENST00000480548 OR51A4Q8NGJ6 313 aa3.34□□□□□ -1.87
SGIP1-209ENST00000480548 ECM29Q5VYK3 1845 aa3.34□□□□□ -1.87
SGIP1-209ENST00000480548 TRBV7-6A0A0J9YX20 115 aa3.33□□□□□ -1.88
SGIP1-209ENST00000480548 A0A1B0GV90 55 aa3.33□□□□□ -1.88
SGIP1-209ENST00000480548 K7ERJ3 54 aa3.33□□□□□ -1.88
SGIP1-209ENST00000480548 MT-ND4LP03901 98 aa3.33□□□□□ -1.88
SGIP1-209ENST00000480548 HRES1P13985 223 aa3.33□□□□□ -1.88
SGIP1-209ENST00000480548 DNAJB13P59910 316 aa3.33□□□□□ -1.88
SGIP1-209ENST00000480548 KRTAP10-9P60411 292 aa3.33□□□□□ -1.88
SGIP1-209ENST00000480548 DYNLT1P63172 113 aa3.33□□□□□ -1.88
SGIP1-209ENST00000480548 TEX29Q8N6K0 151 aa3.33□□□□□ -1.88
SGIP1-209ENST00000480548 C3orf56Q8N813 242 aa3.33□□□□□ -1.88
SGIP1-209ENST00000480548 SLC30A7Q8NEW0 376 aa3.33□□□□□ -1.88
SGIP1-209ENST00000480548 OR4E2Q8NGC2 313 aa3.33□□□□□ -1.88
SGIP1-209ENST00000480548 AQP3Q92482 292 aa3.33□□□□□ -1.88
SGIP1-209ENST00000480548 CBLN4Q9NTU7 201 aa3.33□□□□□ -1.88
SGIP1-209ENST00000480548 HS3ST2Q9Y278 367 aa3.33□□□□□ -1.88
SGIP1-209ENST00000480548 A2MP01023 1474 aa3.33□□□□□ -1.88
SGIP1-209ENST00000480548 BICRAQ9NZM4 1560 aa3.33□□□□□ -1.88
SGIP1-209ENST00000480548 ADGBQ8N7X0 1667 aa3.33□□□□□ -1.88
SGIP1-209ENST00000480548 TRAV13-1A0A0B4J241 112 aa3.32□□□□□ -1.88
SGIP1-209ENST00000480548 IGHV1-18A0A0C4DH31 117 aa3.32□□□□□ -1.88
SGIP1-209ENST00000480548 LINC00587B1AMM8 73 aa3.32□□□□□ -1.88
SGIP1-209ENST00000480548 H3BMG7 143 aa3.32□□□□□ -1.88
SGIP1-209ENST00000480548 PAEPP09466 180 aa3.32□□□□□ -1.88
SGIP1-209ENST00000480548 CRYGAP11844 174 aa3.32□□□□□ -1.88
SGIP1-209ENST00000480548 COX6A1P12074 109 aa3.32□□□□□ -1.88
SGIP1-209ENST00000480548 S100A1P23297 94 aa3.32□□□□□ -1.88
SGIP1-209ENST00000480548 DEFB134Q4QY38 66 aa3.32□□□□□ -1.88
SGIP1-209ENST00000480548 TMEM244Q5VVB8 128 aa3.32□□□□□ -1.88
SGIP1-209ENST00000480548 WFDC11Q8NEX6 87 aa3.32□□□□□ -1.88
SGIP1-209ENST00000480548 OR5D16Q8NGK9 328 aa3.32□□□□□ -1.88
SGIP1-209ENST00000480548 BRK1Q8WUW1 75 aa3.32□□□□□ -1.88
SGIP1-209ENST00000480548 BAIAP2Q9UQB8 552 aa3.32□□□□□ -1.88
SGIP1-209ENST00000480548 CEP164Q9UPV0 1460 aa3.32□□□□□ -1.88
SGIP1-209ENST00000480548 XIRP1Q702N8 1843 aaKnown RBP3.32□□□□□ -1.88
SGIP1-209ENST00000480548 DENND4CQ5VZ89 1909 aa3.32□□□□□ -1.88
SGIP1-209ENST00000480548 PRR14LQ5THK1 2151 aa3.32□□□□□ -1.88
SGIP1-209ENST00000480548 MYH10P35580 1976 aa3.31□□□□□ -1.88
SGIP1-209ENST00000480548 SHANK3Q9BYB0 1731 aa3.31□□□□□ -1.88
SGIP1-209ENST00000480548 TPST1O60507 370 aa3.31□□□□□ -1.88
SGIP1-209ENST00000480548 IFNA4P05014 189 aa3.31□□□□□ -1.88
SGIP1-209ENST00000480548 RELAQ04206 551 aa3.31□□□□□ -1.88
SGIP1-209ENST00000480548 LCN15Q6UWW0 184 aa3.31□□□□□ -1.88
SGIP1-209ENST00000480548 C1orf54Q8WWF1 131 aa3.31□□□□□ -1.88
SGIP1-209ENST00000480548 NHP2Q9NX24 153 aaKnown RBP3.31□□□□□ -1.88
SGIP1-209ENST00000480548 CALML5Q9NZT1 146 aa3.31□□□□□ -1.88
SGIP1-209ENST00000480548 NYNRINQ9P2P1 1898 aaKnown RBP3.3□□□□□ -1.88
SGIP1-209ENST00000480548 RIC1Q4ADV7 1423 aa3.3□□□□□ -1.88
SGIP1-209ENST00000480548 IGHV3-64A0A075B6Q5 118 aa3.3□□□□□ -1.88
SGIP1-209ENST00000480548 MEIKINA0A087WXM9 373 aa3.3□□□□□ -1.88
SGIP1-209ENST00000480548 A0A1B0GVG6 124 aa3.3□□□□□ -1.88
SGIP1-209ENST00000480548 SDCBPO00560 298 aaPredicted RBP3.3□□□□□ -1.88
SGIP1-209ENST00000480548 RER1O15258 196 aa3.3□□□□□ -1.88
SGIP1-209ENST00000480548 APOC1P02654 83 aa3.3□□□□□ -1.88
SGIP1-209ENST00000480548 RPL22P35268 128 aaKnown RBP3.3□□□□□ -1.88
SGIP1-209ENST00000480548 FUSP35637 526 aaKnown RBP eCLIP3.3□□□□□ -1.88
SGIP1-209ENST00000480548 LY6EQ16553 131 aa3.3□□□□□ -1.88
SGIP1-209ENST00000480548 OR4K15Q8NH41 348 aa3.3□□□□□ -1.88
SGIP1-209ENST00000480548 OR5AC2Q9NZP5 309 aa3.3□□□□□ -1.88
SGIP1-209ENST00000480548 NCAPD3P42695 1498 aa3.29□□□□□ -1.88
SGIP1-209ENST00000480548 LRCOL1A6NCL2 159 aa3.29□□□□□ -1.88
SGIP1-209ENST00000480548 G3V3Q6 166 aa3.29□□□□□ -1.88
SGIP1-209ENST00000480548 J3QR89 54 aa3.29□□□□□ -1.88
SGIP1-209ENST00000480548 MT-ND6P03923 174 aa3.29□□□□□ -1.88
SGIP1-209ENST00000480548 METTL15P1P0C7V9 234 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms