RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 A0A0J9YX75 114 aa4.93□□□□□ -1.62
SPTLC1-205ENST00000477888 LRCOL1A6NCL2 159 aa4.93□□□□□ -1.62
SPTLC1-205ENST00000477888 SOCS3O14543 225 aa4.93□□□□□ -1.62
SPTLC1-205ENST00000477888 MYL12BO14950 172 aa4.93□□□□□ -1.62
SPTLC1-205ENST00000477888 PRB4P10163 310 aaPredicted RBP4.93□□□□□ -1.62
SPTLC1-205ENST00000477888 PTHLHP12272 177 aa4.93□□□□□ -1.62
SPTLC1-205ENST00000477888 RANBP1P43487 201 aa4.93□□□□□ -1.62
SPTLC1-205ENST00000477888 HSPE1P61604 102 aaKnown RBP4.93□□□□□ -1.62
SPTLC1-205ENST00000477888 B2MP61769 119 aa4.93□□□□□ -1.62
SPTLC1-205ENST00000477888 ERHP84090 104 aaKnown RBP4.93□□□□□ -1.62
SPTLC1-205ENST00000477888 ARL6IP1Q15041 203 aa4.93□□□□□ -1.62
SPTLC1-205ENST00000477888 TIGITQ495A1 244 aa4.93□□□□□ -1.62
SPTLC1-205ENST00000477888 HES5Q5TA89 166 aa4.93□□□□□ -1.62
SPTLC1-205ENST00000477888 NUDCD2Q8WVJ2 157 aa4.93□□□□□ -1.62
SPTLC1-205ENST00000477888 PYDC1Q8WXC3 89 aa4.93□□□□□ -1.62
SPTLC1-205ENST00000477888 TMEM203Q969S6 136 aa4.93□□□□□ -1.62
SPTLC1-205ENST00000477888 TSC22D3Q99576 134 aa4.93□□□□□ -1.62
SPTLC1-205ENST00000477888 KLK11Q9UBX7 282 aa4.93□□□□□ -1.62
SPTLC1-205ENST00000477888 TRAV30A0A087WSZ9 112 aa4.92□□□□□ -1.62
SPTLC1-205ENST00000477888 A0A096LPF7 62 aa4.92□□□□□ -1.62
SPTLC1-205ENST00000477888 METTL21EPA6NDL7 271 aa4.92□□□□□ -1.62
SPTLC1-205ENST00000477888 SSX5O60225 188 aa4.92□□□□□ -1.62
SPTLC1-205ENST00000477888 PGLYRP1O75594 196 aaPredicted RBP4.92□□□□□ -1.62
SPTLC1-205ENST00000477888 ELK1P19419 428 aa4.92□□□□□ -1.62
SPTLC1-205ENST00000477888 ID1P41134 155 aa4.92□□□□□ -1.62
SPTLC1-205ENST00000477888 PCP4P48539 62 aa4.92□□□□□ -1.62
SPTLC1-205ENST00000477888 PSMB3P49720 205 aa4.92□□□□□ -1.62
SPTLC1-205ENST00000477888 ARPC4P59998 168 aa4.92□□□□□ -1.62
SPTLC1-205ENST00000477888 DHODHQ02127 395 aa4.92□□□□□ -1.62
SPTLC1-205ENST00000477888 EBLN2Q6P2I7 272 aa4.92□□□□□ -1.62
SPTLC1-205ENST00000477888 LINC00612Q8N6U2 182 aa4.92□□□□□ -1.62
SPTLC1-205ENST00000477888 CCDC197Q8NCU1 140 aa4.92□□□□□ -1.62
SPTLC1-205ENST00000477888 BPIFB6Q8NFQ5 453 aa4.92□□□□□ -1.62
SPTLC1-205ENST00000477888 VSIG2Q96IQ7 327 aa4.92□□□□□ -1.62
SPTLC1-205ENST00000477888 TIMM8BQ9Y5J9 83 aaPredicted RBP4.92□□□□□ -1.62
SPTLC1-205ENST00000477888 TMEM235A6NFC5 223 aa4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 GAGE10A6NGK3 116 aa4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 INS-IGF2F8WCM5 200 aa4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 CORTO00230 105 aa4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 ARL6IP5O75915 188 aa4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 NXPH4O95158 308 aa4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 IGLC1P0CG04 106 aa4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 SNCAP37840 140 aa4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 RPL5P46777 297 aaKnown RBP4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 FXYD4P59646 89 aa4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 YPEL3P61236 119 aaPredicted RBP4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 LAIR2Q6ISS4 152 aa4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 OR10J6PQ8NGY7 276 aa4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 Q8WTZ3 238 aa4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 SEC22AQ96IW7 307 aa4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 ATG5Q9H1Y0 275 aa4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 NOP10Q9NPE3 64 aaKnown RBP4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 MSRB1Q9NZV6 116 aa4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 DOK5Q9P104 306 aa4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 PSORS1C1Q9UIG5 152 aa4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 TNXBP22105 4242 aa4.91□□□□□ -1.62
SPTLC1-205ENST00000477888 IFITM5A6NNB3 132 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 M0R2Z0 102 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 ISLRO14498 428 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 GSTZ1O43708 216 aaPredicted RBP4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 SCGB2A1O75556 95 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 INSP01308 110 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 RLN1P04808 185 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 IL4P05112 153 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 RNASE2P10153 161 aaKnown RBP4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 TAS2R60P59551 318 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 RPS25P62851 125 aaKnown RBP4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 SPINK13Q1W4C9 94 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 SPINK9Q5DT21 86 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 ZNF555Q8NEP9 628 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 BEST4Q8NFU0 473 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 OR11H7Q8NGC8 314 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 OR6F1Q8NGZ6 308 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 OR4A16Q8NH70 328 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 COQ8AQ8NI60 647 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 GPR146Q96CH1 333 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 C16orf74Q96GX8 76 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 C20orf173Q96LM9 149 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 C9orf16Q9BUW7 83 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 DAPK2Q9UIK4 370 aa4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 LSM2Q9Y333 95 aaKnown RBP4.9□□□□□ -1.63
SPTLC1-205ENST00000477888 TRAV9-2A0A087WT02 112 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 NPIPB6E9PJ23 425 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 K7EP13 123 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 IGKV1-39P01597 117 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 IGKV1D-39P04432 117 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 LORP23490 312 aaPredicted RBP4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 OPRK1P41145 380 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 SUB1P53999 127 aaKnown RBP eCLIP4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 OR10A3P58181 314 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 GNG2P59768 71 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 SPHARQ15513 63 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 PRSS54Q6PEW0 395 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 ZNF493Q6ZR52 646 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 AHSA2Q719I0 299 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 SCXQ7RTU7 201 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 GPR141Q7Z602 305 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 TMED4Q7Z7H5 227 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 TMEM17Q86X19 198 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 HOGA1Q86XE5 327 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms