RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 GAGE2EQ4V326 116 aa10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 GAPTQ8N292 157 aa10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 RPEQ96AT9 228 aa10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 ONECUT1Q9UBC0 465 aa10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 GAGE2DQ9UEU5 116 aa10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 INSIG2Q9Y5U4 225 aa10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 RSPO1Q2MKA7 263 aaPredicted RBP10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 Q6ZSR3 168 aa10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 C1orf162Q8NEQ5 155 aaPredicted RBP10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 OR9G1Q8NH87 305 aa10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 PPDPFLQ8WWR9 84 aa10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 OR2H1Q9GZK4 316 aa10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 DEFB127Q9H1M4 99 aa10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 UBTD1Q9HAC8 227 aa10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 ZFHX2Q9C0A1 2572 aaPredicted RBP10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 KIR2DS1A0A191URI9 304 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 IGLL5B9A064 214 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 KIR2DS1Q14954 304 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 MEIG1Q5JSS6 88 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 IBA57Q5T440 356 aaKnown RBP10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 IGFL2Q6UWQ7 119 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 FDCSPQ8NFU4 85 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 IL1F10Q8WWZ1 152 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 C18orf15Q96N68 181 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 SRSF8Q9BRL6 282 aaKnown RBP10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 CACNG5Q9UF02 275 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 TRAV17A0A0B4J275 112 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 FAM90A18PA6NE21 464 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 FAM90A16PA6NEW6 464 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 FAM90A8PA6NJQ4 464 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 FAM90A9PA6NNJ1 464 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 TM4SF5O14894 197 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 PDCD6O75340 191 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 FCGR2AP12318 317 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 LRRC75A-AS1Q8N1F1 130 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 LYZL4Q96KX0 146 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 PIGLQ9Y2B2 252 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 MUC6Q6W4X9 2439 aa10.32□□□□□ -0.76
RTFDC1-207ENST00000477573 C15orf65H3BRN8 121 aa10.31□□□□□ -0.76
RTFDC1-207ENST00000477573 IGHV3-9P01782 118 aa10.31□□□□□ -0.76
RTFDC1-207ENST00000477573 TNFRSF1AP19438 455 aa10.31□□□□□ -0.76
RTFDC1-207ENST00000477573 CENPWQ5EE01 88 aa10.31□□□□□ -0.76
RTFDC1-207ENST00000477573 MRAPQ8TCY5 172 aa10.31□□□□□ -0.76
RTFDC1-207ENST00000477573 SPANXCQ9NY87 97 aa10.31□□□□□ -0.76
RTFDC1-207ENST00000477573 TRAV5A0A0B4J249 113 aa10.31□□□□□ -0.76
RTFDC1-207ENST00000477573 SH2D7A6NKC9 451 aaPredicted RBP10.31□□□□□ -0.76
RTFDC1-207ENST00000477573 ARL14EPLP0DKL9 152 aa10.31□□□□□ -0.76
RTFDC1-207ENST00000477573 KRTAP27-1Q3LI81 207 aa10.31□□□□□ -0.76
RTFDC1-207ENST00000477573 DUX5Q96PT3 197 aa10.31□□□□□ -0.76
RTFDC1-207ENST00000477573 TRIB1Q96RU8 372 aa10.31□□□□□ -0.76
RTFDC1-207ENST00000477573 MDFICQ9P1T7 246 aa10.31□□□□□ -0.76
RTFDC1-207ENST00000477573 RTTNQ86VV8 2226 aa10.3□□□□□ -0.76
RTFDC1-207ENST00000477573 MFAP2P55001 183 aa10.3□□□□□ -0.76
RTFDC1-207ENST00000477573 DEFB109BQ30KR1 87 aa10.3□□□□□ -0.76
RTFDC1-207ENST00000477573 Q6ZRM9 215 aa10.3□□□□□ -0.76
RTFDC1-207ENST00000477573 RBMXL3Q8N7X1 1067 aaKnown RBP10.3□□□□□ -0.76
RTFDC1-207ENST00000477573 RNASE7Q9H1E1 156 aaKnown RBP10.3□□□□□ -0.76
RTFDC1-207ENST00000477573 PGLYRP1O75594 196 aaPredicted RBP10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 TUSC2O75896 110 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 PATE4P0C8F1 98 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 ERVK11-1P61568 191 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 C3AR1Q16581 482 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 ZDHHC23Q8IYP9 409 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 BCL6BQ8N143 479 aaPredicted RBP10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 DLL3Q9NYJ7 618 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 SPRR3Q9UBC9 169 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 YTHDF2Q9Y5A9 579 aaKnown RBP10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 ATP23Q9Y6H3 246 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 FAM186AA6NE01 2351 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 C5orf63A6NC05 138 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 MPDU1O75352 247 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 WT1P19544 449 aaPredicted RBP10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 ASIPP42127 132 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 FXYD2P54710 66 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 TFF3Q07654 80 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 FXYD3Q14802 87 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 CFAP126Q5VTH2 177 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 MYO7BQ6PIF6 2116 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 FAM159AQ6UWV7 190 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 H2BFWTQ7Z2G1 175 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 OSR2Q8N2R0 312 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 OR13C6PQ8NH95 151 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 PIFOQ8TCI5 191 aa10.29□□□□□ -0.76
RTFDC1-207ENST00000477573 GCSHP23434 173 aa10.28□□□□□ -0.76
RTFDC1-207ENST00000477573 PPIFP30405 207 aaKnown RBP10.28□□□□□ -0.76
RTFDC1-207ENST00000477573 MPV17P39210 176 aa10.28□□□□□ -0.76
RTFDC1-207ENST00000477573 LGALS9BQ3B8N2 356 aa10.28□□□□□ -0.76
RTFDC1-207ENST00000477573 LGALS9CQ6DKI2 356 aa10.28□□□□□ -0.76
RTFDC1-207ENST00000477573 PRDM14Q9GZV8 571 aa10.28□□□□□ -0.76
RTFDC1-207ENST00000477573 GVINP1Q7Z2Y8 2422 aa10.28□□□□□ -0.76
RTFDC1-207ENST00000477573 DMXL1Q9Y485 3027 aa10.28□□□□□ -0.76
RTFDC1-207ENST00000477573 A0A1B0GX51 115 aa10.28□□□□□ -0.76
RTFDC1-207ENST00000477573 PMS2P5A8MQ11 134 aa10.28□□□□□ -0.76
RTFDC1-207ENST00000477573 ZNF688P0C7X2 276 aa10.28□□□□□ -0.76
RTFDC1-207ENST00000477573 FAM106CPP0CH98 169 aa10.28□□□□□ -0.76
RTFDC1-207ENST00000477573 PLA2G5P39877 138 aa10.28□□□□□ -0.76
RTFDC1-207ENST00000477573 FAM106AQ4KMX7 169 aa10.28□□□□□ -0.76
RTFDC1-207ENST00000477573 GDF5OSQ5U4N7 250 aa10.28□□□□□ -0.76
RTFDC1-207ENST00000477573 FAM231DQ6ZW35 169 aa10.28□□□□□ -0.76
RTFDC1-207ENST00000477573 NFE4Q86UQ8 179 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms