RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 C18orf15Q96N68 181 aa4.07□□□□□ -1.76
COL3A1-205ENST00000470167 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
COL3A1-205ENST00000470167 PARP12Q9H0J9 701 aaKnown RBP4.07□□□□□ -1.76
COL3A1-205ENST00000470167 DAZ1Q9NQZ3 744 aaKnown RBP4.07□□□□□ -1.76
COL3A1-205ENST00000470167 DAZ3Q9NR90 486 aaKnown RBP4.07□□□□□ -1.76
COL3A1-205ENST00000470167 KLK5Q9Y337 293 aaPredicted RBP4.07□□□□□ -1.76
COL3A1-205ENST00000470167 AMMECR1Q9Y4X0 333 aaPredicted RBP4.07□□□□□ -1.76
COL3A1-205ENST00000470167 SERP1Q9Y6X1 66 aa4.07□□□□□ -1.76
COL3A1-205ENST00000470167 SMKR1H3BMG3 65 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 M0R129 80 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 NDUFS7O75251 213 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 SCRG1O75711 98 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 LYZL6O75951 148 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 IGKV1D-16P01601 117 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 GYPBP06028 91 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 RFPL3SP0C7P2 107 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 HLA-DRB4P13762 266 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 CCL1P22362 96 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 HERV-K104P61576 105 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 RPS11P62280 158 aaKnown RBP eCLIP4.06□□□□□ -1.76
COL3A1-205ENST00000470167 TMEM187Q14656 261 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 RTL8BQ17RB0 113 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 Q6P435 159 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 Q6ZQT7 251 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 PCP2Q8IVA1 136 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 MMD2Q8IY49 270 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 ZNF645Q8N7E2 425 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 C3orf56Q8N813 242 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 THAP8Q8NA92 274 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 NEXN-AS1Q8NBZ9 246 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 FGF13Q92913 245 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 GPX7Q96SL4 187 aaPredicted RBP4.06□□□□□ -1.76
COL3A1-205ENST00000470167 CHCHD5Q9BSY4 110 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 FAM103A1Q9BTL3 118 aaKnown RBP4.06□□□□□ -1.76
COL3A1-205ENST00000470167 AICDAQ9GZX7 198 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 ZNF665Q9H7R5 613 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 TAAR2Q9P1P5 351 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 HLA-DRB4X5D2U9 266 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 NRXN3Q9Y4C0 1643 aa4.06□□□□□ -1.76
COL3A1-205ENST00000470167 RGPD4Q7Z3J3 1758 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 KIDINS220Q9ULH0 1771 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 A0A0G2JMZ2 1700 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 LRRC37A2A6NM11 1700 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 LRRC37AA6NMS7 1700 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 TRGV5A0A0B4J1U4 118 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 A1L4Q6 167 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 FAM24AA6NFZ4 105 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 KNCNA6PVL3 124 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 LYRM9A8MSI8 78 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 PATE3B3GLJ2 98 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 K7EM74 188 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 CDX4O14627 284 aaPredicted RBP4.05□□□□□ -1.76
COL3A1-205ENST00000470167 IGKCP01834 107 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 CD7P09564 240 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 CD59P13987 128 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 FKBP1AP62942 108 aaKnown RBP4.05□□□□□ -1.76
COL3A1-205ENST00000470167 DPTQ07507 201 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 ELOCQ15369 112 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 PHLDA2Q53GA4 152 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 ZNF542PQ5EBM4 170 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 FAM78AQ5JUQ0 283 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 ZNF678Q5SXM1 525 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 NOXRED1Q6NXP6 359 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 KCTD18Q6PI47 426 aaPredicted RBP4.05□□□□□ -1.76
COL3A1-205ENST00000470167 TMEM207Q6UWW9 146 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 ZNF493Q6ZR52 646 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 Q6ZSN1 163 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 C9orf139Q6ZV77 190 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 AMN1Q8IY45 258 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 DRAM1Q8N682 238 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 OR2A1Q8NGT9 310 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 ZNF721Q8TF20 911 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 COPS9Q8WXC6 57 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 ZNF799Q96GE5 643 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 ODF3Q96PU9 254 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 SMIM7Q9BQ49 75 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 SRXN1Q9BYN0 137 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 R3HDMLQ9H3Y0 253 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 NAV2Q8IVL1 2488 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 TTC3P53804 2025 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 TICRRQ7Z2Z1 1910 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 ARFGEF1Q9Y6D6 1849 aa4.05□□□□□ -1.76
COL3A1-205ENST00000470167 TTC28Q96AY4 2481 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 DOCK3Q8IZD9 2030 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 F2Z2F3 143 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 H3BT86 120 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 J3QRE1 110 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 CCL21O00585 134 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 PDCD6O75340 191 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 NDUFB2O95178 105 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 LYPD3O95274 346 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 LGALS2P05162 132 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 COX6A1P12074 109 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 CSN1S1P47710 185 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 DSCR4P56555 118 aaPredicted RBP4.04□□□□□ -1.76
COL3A1-205ENST00000470167 ARL16Q0P5N6 197 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 SRSF9Q13242 221 aaKnown RBP eCLIP4.04□□□□□ -1.76
COL3A1-205ENST00000470167 INSL4Q14641 139 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 LGALS9BQ3B8N2 356 aa4.04□□□□□ -1.76
COL3A1-205ENST00000470167 LINC01545Q5VT33 79 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms