RNA–Protein interactions for RNA: ENST00000469361.5

TRAPPC6B-203, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 2

Gene TRAPPC6B, Length 4,533 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-203ENST00000469361 TRAV26-1A0A087WT03 109 aa6.88□□□□□ -1.31
TRAPPC6B-203ENST00000469361 TRAV8-6A0A0B4J262 113 aa6.88□□□□□ -1.31
TRAPPC6B-203ENST00000469361 IGHV3-66A0A0C4DH42 116 aa6.88□□□□□ -1.31
TRAPPC6B-203ENST00000469361 H7C2G1 150 aa6.88□□□□□ -1.31
TRAPPC6B-203ENST00000469361 UPK2O00526 184 aa6.88□□□□□ -1.31
TRAPPC6B-203ENST00000469361 PSG1P11464 419 aa6.88□□□□□ -1.31
TRAPPC6B-203ENST00000469361 ANOS1P23352 680 aa6.88□□□□□ -1.31
TRAPPC6B-203ENST00000469361 RPL13AP40429 203 aaKnown RBP6.88□□□□□ -1.31
TRAPPC6B-203ENST00000469361 LCN12Q6JVE5 192 aa6.88□□□□□ -1.31
TRAPPC6B-203ENST00000469361 C16orf92Q96LL3 132 aa6.88□□□□□ -1.31
TRAPPC6B-203ENST00000469361 LAMA3Q16787 3333 aa6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 ATP5IP56385 69 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 RSPO1Q2MKA7 263 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 ZNF585BQ52M93 769 aa6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 LINC01560Q8TB33 94 aa6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 CACNG8Q8WXS5 425 aa6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 MAP1LC3AQ9H492 121 aa6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 RPP21Q9H633 154 aaKnown RBP6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 ARHGAP21Q5T5U3 1957 aa6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 DLX1P56177 255 aa6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 LOXL3P58215 753 aa6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 STPG4Q8N801 248 aa6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 RNF166Q96A37 237 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 Q9H3A6 140 aa6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 RALYQ9UKM9 306 aaKnown RBP6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 M0R3E3 92 aa6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 NTF4P34130 210 aa6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 CD69Q07108 199 aa6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 HIST1H4GQ99525 98 aa6.87□□□□□ -1.31
TRAPPC6B-203ENST00000469361 B3GALT5-AS1P59052 145 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 CX3CL1P78423 397 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 ZNF414Q96IQ9 312 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 SIGMAR1Q99720 223 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 MGST2Q99735 147 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 OSTCQ9NRP0 149 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 NUP210LQ5VU65 1888 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 ACACBO00763 2458 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 WNK1Q9H4A3 2382 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 TRBV20OR9-2A0A075B6H5 130 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 ZNF883P0CG24 379 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 HERVK_113P61574 105 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 BSPH1Q075Z2 132 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 MLANAQ16655 118 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 SHISA2Q6UWI4 295 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 OR1N2Q8NGR9 330 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 PRELID3AQ96N28 172 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 TMEM160Q9NX00 188 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 PCNX3Q9H6A9 2034 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 PAX9P55771 341 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 FOXL1Q12952 345 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 Q6P435 159 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 COQ2Q96H96 371 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 ELOVL5Q9NYP7 299 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 TRAV9-1A0A075B6T8 112 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 IGHV1-18A0A0C4DH31 117 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 A0A1W2PRE2 83 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 LYNX1G3V0Z9 82 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 LYNX1P0DP58 116 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 SMAGPQ0VAQ4 97 aa6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 RBPMS2Q6ZRY4 209 aaKnown RBP6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 C1orf162Q8NEQ5 155 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC6B-203ENST00000469361 CACNA1AO00555 2505 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 A1L4Q6 167 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 C15orf62A8K5M9 175 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 B9A039 149 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 MMP23AO75900 390 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 IGKV3-15P01624 115 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 CSRP1P21291 193 aaKnown RBP6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 SRSF7Q16629 238 aaKnown RBP eCLIP6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 CD177Q8N6Q3 437 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 TEX45Q8NA69 505 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 LINC00312Q9Y6C7 94 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 NPIPB11E5RHQ5 1161 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 ETV2O00321 342 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 TM4SF5O14894 197 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 PRCDQ00LT1 54 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 LYRM7Q5U5X0 104 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 ASCL4Q6XD76 172 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 CRIM1Q9NZV1 1036 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 IGHV3OR16-10A0A075B7F0 116 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 GAGE12BA1L429 117 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 C17orf100A8MU93 164 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 SRRM5B3KS81 715 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 FAM106CPP0CH98 169 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 FAM90A1Q86YD7 464 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 LINC00479Q96M42 142 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 GNB1LQ9BYB4 327 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 EPDR1Q9UM22 224 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 RNF115Q9Y4L5 304 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 PHLDA3Q9Y5J5 127 aa6.85□□□□□ -1.31
TRAPPC6B-203ENST00000469361 RNFT1Q5M7Z0 435 aa6.84□□□□□ -1.31
TRAPPC6B-203ENST00000469361 METTL26Q96S19 204 aa6.84□□□□□ -1.31
TRAPPC6B-203ENST00000469361 PEF1Q9UBV8 284 aaKnown RBP6.84□□□□□ -1.31
TRAPPC6B-203ENST00000469361 ANAPC10Q9UM13 185 aa6.84□□□□□ -1.31
TRAPPC6B-203ENST00000469361 NOTCH2Q04721 2471 aa6.84□□□□□ -1.31
TRAPPC6B-203ENST00000469361 SS18L1O75177 396 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC6B-203ENST00000469361 IGKV1D-33P01593 117 aa6.84□□□□□ -1.31
TRAPPC6B-203ENST00000469361 IGKV1-33P01594 117 aa6.84□□□□□ -1.31
TRAPPC6B-203ENST00000469361 ACTL10Q5JWF8 245 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms