RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 TEX45Q8NA69 505 aa11.21□□□□□ -0.62
COL27A1-203ENST00000468565 OR10P1Q8NGE3 313 aa11.21□□□□□ -0.62
COL27A1-203ENST00000468565 OR1N2Q8NGR9 330 aa11.21□□□□□ -0.62
COL27A1-203ENST00000468565 TMEM68Q96MH6 324 aa11.21□□□□□ -0.62
COL27A1-203ENST00000468565 H3BUA1 57 aa11.2□□□□□ -0.62
COL27A1-203ENST00000468565 CNIH1O95406 144 aa11.2□□□□□ -0.62
COL27A1-203ENST00000468565 HOXD3P31249 432 aaPredicted RBP11.2□□□□□ -0.62
COL27A1-203ENST00000468565 KHDC3LQ587J8 217 aa11.2□□□□□ -0.62
COL27A1-203ENST00000468565 MBD3L1Q8WWY6 194 aa11.2□□□□□ -0.62
COL27A1-203ENST00000468565 RPRMQ9NS64 109 aa11.2□□□□□ -0.62
COL27A1-203ENST00000468565 EIF3GO75821 320 aaKnown RBP eCLIP11.19□□□□□ -0.62
COL27A1-203ENST00000468565 SRP19P09132 144 aaKnown RBP11.19□□□□□ -0.62
COL27A1-203ENST00000468565 GNB1P62873 340 aa11.19□□□□□ -0.62
COL27A1-203ENST00000468565 ICAM4Q14773 271 aa11.19□□□□□ -0.62
COL27A1-203ENST00000468565 TUBA4BQ9H853 241 aa11.19□□□□□ -0.62
COL27A1-203ENST00000468565 LGALS1P09382 135 aaKnown RBP11.19□□□□□ -0.62
COL27A1-203ENST00000468565 RPP30P78346 268 aaKnown RBP11.19□□□□□ -0.62
COL27A1-203ENST00000468565 MRGPRG-AS1Q2M3A8 158 aa11.19□□□□□ -0.62
COL27A1-203ENST00000468565 C9orf66Q5T8R8 295 aa11.19□□□□□ -0.62
COL27A1-203ENST00000468565 ASPHD1Q5U4P2 390 aa11.19□□□□□ -0.62
COL27A1-203ENST00000468565 RXFP4Q8TDU9 374 aa11.19□□□□□ -0.62
COL27A1-203ENST00000468565 OR5B12Q96R08 314 aa11.19□□□□□ -0.62
COL27A1-203ENST00000468565 LOC102723971A0A1B0GUV8 181 aa11.18□□□□□ -0.62
COL27A1-203ENST00000468565 COLCA2A8K830 154 aa11.18□□□□□ -0.62
COL27A1-203ENST00000468565 K7EIL1 84 aa11.18□□□□□ -0.62
COL27A1-203ENST00000468565 BRI3O95415 125 aa11.18□□□□□ -0.62
COL27A1-203ENST00000468565 AARDQ4LEZ3 155 aa11.18□□□□□ -0.62
COL27A1-203ENST00000468565 OR4A16Q8NH70 328 aa11.18□□□□□ -0.62
COL27A1-203ENST00000468565 C20orf24Q9BUV8 137 aa11.18□□□□□ -0.62
COL27A1-203ENST00000468565 QTRT1Q9BXR0 403 aaKnown RBP11.18□□□□□ -0.62
COL27A1-203ENST00000468565 DMRT1Q9Y5R6 373 aa11.18□□□□□ -0.62
COL27A1-203ENST00000468565 PUS1Q9Y606 427 aaKnown RBP eCLIP11.18□□□□□ -0.62
COL27A1-203ENST00000468565 PMS2P5A8MQ11 134 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 UBE2CO00762 179 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 IFNA1P01562 189 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 IFNA17P01571 189 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 MBP02144 154 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 OR9G9P0C7N8 305 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 NQO2P16083 231 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 AKR1C3P42330 323 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 TPPP2P59282 170 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 SPCS3P61009 180 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 PRSS8Q16651 343 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 OR10G4Q8NGN3 311 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 OR4S2Q8NH73 311 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 RHOVQ96L33 236 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 VSIRQ9H7M9 311 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 NIT2Q9NQR4 276 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 GNG13Q9P2W3 67 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 SEC14L6B5MCN3 397 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 TRGV3P03979 118 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 SAA1P0DJI8 122 aaPredicted RBP11.17□□□□□ -0.62
COL27A1-203ENST00000468565 FGF7P21781 194 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 ELLP55199 621 aaPredicted RBP11.17□□□□□ -0.62
COL27A1-203ENST00000468565 LCN15Q6UWW0 184 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 OR52E5Q8NH55 327 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 MS4A10Q96PG2 267 aa11.17□□□□□ -0.62
COL27A1-203ENST00000468565 WI2-2373I1.2A0A1W2PRP0 233 aa11.16□□□□□ -0.62
COL27A1-203ENST00000468565 MAP1LC3B2A6NCE7 125 aa11.16□□□□□ -0.62
COL27A1-203ENST00000468565 LINC01619G3V211 115 aa11.16□□□□□ -0.62
COL27A1-203ENST00000468565 BCL2P10415 239 aa11.16□□□□□ -0.62
COL27A1-203ENST00000468565 OR2B8PP59922 312 aa11.16□□□□□ -0.62
COL27A1-203ENST00000468565 TNXAQ16473 311 aa11.16□□□□□ -0.62
COL27A1-203ENST00000468565 VWC2Q2TAL6 325 aa11.16□□□□□ -0.62
COL27A1-203ENST00000468565 ZNF709Q8N972 641 aa11.16□□□□□ -0.62
COL27A1-203ENST00000468565 MAP1LC3BQ9GZQ8 125 aa11.16□□□□□ -0.62
COL27A1-203ENST00000468565 C17orf112F2Z3M2 114 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 H3BQ15 152 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 MT-ND4LP03901 98 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 INSL3P51460 131 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 CEBPGP53567 150 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 ZNF726P1Q15940 193 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 LBHQ53QV2 105 aaPredicted RBP11.15□□□□□ -0.62
COL27A1-203ENST00000468565 SPINK9Q5DT21 86 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 SSX9Q7RTT3 188 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 ZNF429Q86V71 674 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 MMD2Q8IY49 270 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 CYB561D1Q8N8Q1 229 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 OR5T1Q8NG75 326 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 VSTM2AQ8TAG5 236 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 SRSF12Q8WXF0 261 aaKnown RBP11.15□□□□□ -0.62
COL27A1-203ENST00000468565 ZNF430Q9H8G1 570 aaPredicted RBP11.15□□□□□ -0.62
COL27A1-203ENST00000468565 ZNF355PQ9NSJ1 428 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 SLC39A9Q9NUM3 307 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 SORL1Q92673 2214 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 IGHV4OR15-8A0A075B7B6 117 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 A0A087WW49 117 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 A0A0G2JLM5 398 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 IGHV3-11P01762 117 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 HIST1H2BAQ96A08 127 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 NIPSNAP3BQ9BS92 247 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 TMEM140Q9NV12 185 aa11.15□□□□□ -0.62
COL27A1-203ENST00000468565 ZFP92A6NM28 416 aa11.14□□□□□ -0.63
COL27A1-203ENST00000468565 C15orf62A8K5M9 175 aa11.14□□□□□ -0.63
COL27A1-203ENST00000468565 C1orf196B1AJZ1 125 aa11.14□□□□□ -0.63
COL27A1-203ENST00000468565 OVOL1O14753 267 aa11.14□□□□□ -0.63
COL27A1-203ENST00000468565 ACTL6BO94805 426 aa11.14□□□□□ -0.63
COL27A1-203ENST00000468565 PMS2P11Q13670 270 aa11.14□□□□□ -0.63
COL27A1-203ENST00000468565 TVP23CQ96ET8 276 aa11.14□□□□□ -0.63
COL27A1-203ENST00000468565 VAX2Q9UIW0 290 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms