RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 FBN3Q75N90 2809 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 PLXND1Q9Y4D7 1925 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 hCG_1818297A0A087WSY0 165 aa1.24□□□□□ -2.21
CLK1-208ENST00000464454 PRORSD1PA6NEY8 169 aa1.24□□□□□ -2.21
CLK1-208ENST00000464454 A8MT66 165 aa1.24□□□□□ -2.21
CLK1-208ENST00000464454 MFSD11O43934 449 aa1.24□□□□□ -2.21
CLK1-208ENST00000464454 RNASE3P12724 160 aaKnown RBP1.24□□□□□ -2.21
CLK1-208ENST00000464454 PPIBP23284 216 aaKnown RBP1.24□□□□□ -2.21
CLK1-208ENST00000464454 YPEL3P61236 119 aaPredicted RBP1.24□□□□□ -2.21
CLK1-208ENST00000464454 SARNPP82979 210 aaKnown RBP1.24□□□□□ -2.21
CLK1-208ENST00000464454 TRIQKQ629K1 86 aa1.24□□□□□ -2.21
CLK1-208ENST00000464454 C3orf33Q6P1S2 294 aa1.24□□□□□ -2.21
CLK1-208ENST00000464454 TOMM20LQ6UXN7 152 aa1.24□□□□□ -2.21
CLK1-208ENST00000464454 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.24□□□□□ -2.21
CLK1-208ENST00000464454 GOLT1AQ6ZVE7 132 aa1.24□□□□□ -2.21
CLK1-208ENST00000464454 NUP35Q8NFH5 326 aa1.24□□□□□ -2.21
CLK1-208ENST00000464454 AQP3Q92482 292 aa1.24□□□□□ -2.21
CLK1-208ENST00000464454 C2orf50Q96LR7 162 aa1.24□□□□□ -2.21
CLK1-208ENST00000464454 OSTCQ9NRP0 149 aa1.24□□□□□ -2.21
CLK1-208ENST00000464454 UQCC1Q9NVA1 299 aa1.24□□□□□ -2.21
CLK1-208ENST00000464454 CYSLTR1Q9Y271 337 aa1.24□□□□□ -2.21
CLK1-208ENST00000464454 NDUFAF1Q9Y375 327 aa1.24□□□□□ -2.21
CLK1-208ENST00000464454 KMT2BQ9UMN6 2715 aaPredicted RBP1.24□□□□□ -2.21
CLK1-208ENST00000464454 ZNF106Q9H2Y7 1883 aaKnown RBP1.24□□□□□ -2.21
CLK1-208ENST00000464454 ALPK2Q86TB3 2170 aa1.24□□□□□ -2.21
CLK1-208ENST00000464454 YTHDC2Q9H6S0 1430 aaKnown RBP1.23□□□□□ -2.21
CLK1-208ENST00000464454 COL4A5P29400 1685 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 SYNMO15061 1565 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 TRBV19A0A075B6N1 114 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 TRAV4A0A0B4J268 109 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 A0A1B0GV72 72 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 GPR31O00270 319 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 HCRTO43612 131 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 ATG12O94817 140 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 IFNA21P01568 189 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 C8GP07360 202 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 IDO1P14902 403 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 CASP1P29466 404 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 TCTAP57738 103 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 TAS2R41P59536 307 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 RAB4BP61018 213 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 RHOBP62745 196 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 TSNQ15631 228 aaKnown RBP1.23□□□□□ -2.21
CLK1-208ENST00000464454 Q6Q795 121 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 SMIM20Q8N5G0 67 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 TMEM35BQ8NCS4 154 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 OR4C6Q8NH72 309 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 GNPDA2Q8TDQ7 276 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 PLEKHB2Q96CS7 222 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 ZHX1-C8orf76Q96EF9 292 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 PHB2Q99623 299 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 PBOV1Q9GZY1 135 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 LRTM1Q9HBL6 345 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 LYRM2Q9NU23 88 aaPredicted RBP1.23□□□□□ -2.21
CLK1-208ENST00000464454 TAS2R4Q9NYW5 299 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 OPTCQ9UBM4 332 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 SLC35A3Q9Y2D2 325 aa1.23□□□□□ -2.21
CLK1-208ENST00000464454 FLG2Q5D862 2391 aaPredicted RBP1.23□□□□□ -2.21
CLK1-208ENST00000464454 DIDO1Q9BTC0 2240 aaKnown RBP1.23□□□□□ -2.21
CLK1-208ENST00000464454 TRAV1-1A0A0B4J248 108 aa1.22□□□□□ -2.21
CLK1-208ENST00000464454 A0A1W2PRE2 83 aa1.22□□□□□ -2.21
CLK1-208ENST00000464454 KPNA4O00629 521 aaPredicted RBP1.22□□□□□ -2.21
CLK1-208ENST00000464454 PIAS1O75925 651 aa1.22□□□□□ -2.21
CLK1-208ENST00000464454 IFNA14P01570 189 aa1.22□□□□□ -2.21
CLK1-208ENST00000464454 CRHP06850 196 aa1.22□□□□□ -2.21
CLK1-208ENST00000464454 ASAH2BP0C7U1 165 aa1.22□□□□□ -2.21
CLK1-208ENST00000464454 BAALC-AS2P0C853 105 aa1.22□□□□□ -2.21
CLK1-208ENST00000464454 SCGB1A1P11684 91 aa1.22□□□□□ -2.21
CLK1-208ENST00000464454 MIFP14174 115 aa1.22□□□□□ -2.21
CLK1-208ENST00000464454 ERP29P30040 261 aaKnown RBP1.22□□□□□ -2.21
CLK1-208ENST00000464454 SERPINB1P30740 379 aa1.22□□□□□ -2.21
CLK1-208ENST00000464454 BRS3P32247 399 aa1.22□□□□□ -2.21
CLK1-208ENST00000464454 LINC01554Q52M75 96 aa1.22□□□□□ -2.21
CLK1-208ENST00000464454 GPR146Q96CH1 333 aa1.22□□□□□ -2.21
CLK1-208ENST00000464454 TMEM133Q9H2Q1 129 aa1.22□□□□□ -2.21
CLK1-208ENST00000464454 ENY2Q9NPA8 101 aa1.22□□□□□ -2.21
CLK1-208ENST00000464454 FAM32AQ9Y421 112 aaKnown RBP1.22□□□□□ -2.21
CLK1-208ENST00000464454 SNURFQ9Y675 71 aa1.22□□□□□ -2.21
CLK1-208ENST00000464454 PBRM1Q86U86 1689 aa1.22□□□□□ -2.21
CLK1-208ENST00000464454 FHAD1B1AJZ9 1412 aa1.22□□□□□ -2.21
CLK1-208ENST00000464454 ZCCHC11Q5TAX3 1644 aaKnown RBP1.22□□□□□ -2.21
CLK1-208ENST00000464454 J3QRK9 145 aa1.21□□□□□ -2.22
CLK1-208ENST00000464454 OR2T1O43869 369 aa1.21□□□□□ -2.22
CLK1-208ENST00000464454 SMIM17P0DL12 118 aa1.21□□□□□ -2.22
CLK1-208ENST00000464454 RPS28P62857 69 aaKnown RBP1.21□□□□□ -2.22
CLK1-208ENST00000464454 AKR1C8PQ5T2L2 129 aa1.21□□□□□ -2.22
CLK1-208ENST00000464454 LINC00311Q8N616 119 aa1.21□□□□□ -2.22
CLK1-208ENST00000464454 OR52R1Q8NGF1 315 aa1.21□□□□□ -2.22
CLK1-208ENST00000464454 OR10K1Q8NGX5 313 aa1.21□□□□□ -2.22
CLK1-208ENST00000464454 OR13C6PQ8NH95 151 aa1.21□□□□□ -2.22
CLK1-208ENST00000464454 LYSMD1Q96S90 227 aa1.21□□□□□ -2.22
CLK1-208ENST00000464454 SPANXA1Q9NS26 97 aa1.21□□□□□ -2.22
CLK1-208ENST00000464454 ACER3Q9NUN7 267 aa1.21□□□□□ -2.22
CLK1-208ENST00000464454 NHP2Q9NX24 153 aaKnown RBP1.21□□□□□ -2.22
CLK1-208ENST00000464454 TVP23BQ9NYZ1 205 aa1.21□□□□□ -2.22
CLK1-208ENST00000464454 GINS2Q9Y248 185 aa1.21□□□□□ -2.22
CLK1-208ENST00000464454 SCN10AQ9Y5Y9 1956 aa1.21□□□□□ -2.22
CLK1-208ENST00000464454 KIF1BO60333 1816 aa1.2□□□□□ -2.22
CLK1-208ENST00000464454 A0A087X0T9 212 aa1.2□□□□□ -2.22
CLK1-208ENST00000464454 C2orf70A6NJV1 201 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms