RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 HPRT1P00492 218 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 IGKV1-5P01602 117 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 IGLV2-23P01705 113 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 APOA2P02652 100 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 P0C879 139 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 TRAPPC2P0DI81 140 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 TRAPPC2BP0DI82 140 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 HLA-GP17693 338 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 CD24P25063 80 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 CNTFRP26992 372 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 G6PCP35575 357 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 CEACAM3P40198 252 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 KIR2DS2P43631 304 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 AKR1C2P52895 323 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 H2BFSP57053 126 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 ERVK-16P61578 105 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 NMSQ5H8A3 153 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 SPNS3Q6ZMD2 512 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 C9orf47Q6ZRZ4 202 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 C16orf82Q7Z2V1 217 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 ZNF546Q86UE3 836 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 NFE4Q86UQ8 179 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 PDPNQ86YL7 162 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 ZNF695Q8IW36 515 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 VKORC1L1Q8N0U8 176 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 LGI3Q8N145 548 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 OR4S2Q8NH73 311 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 COQ8AQ8NI60 647 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 IL22RA2Q969J5 263 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 MALSU1Q96EH3 234 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 OR10C1Q96KK4 312 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 RETNQ9HD89 108 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 COMMD9Q9P000 198 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 THYN1Q9P016 225 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 NAGKQ9UJ70 344 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 RCL1Q9Y2P8 373 aaKnown RBP3.6□□□□□ -1.83
CSMD3-205ENST00000462254 WASHC3Q9Y3C0 194 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 TSSC4Q9Y5U2 329 aaPredicted RBP3.6□□□□□ -1.83
CSMD3-205ENST00000462254 V9GYY9 64 aa3.6□□□□□ -1.83
CSMD3-205ENST00000462254 TLN2Q9Y4G6 2542 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 TRAV3A0A0B4J244 114 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 FAM231BA6NCW3 169 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 OOSP1A8MZH6 123 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 SMLR1H3BR10 107 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 K7EQD1 137 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 OR2A4O95047 310 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 LY6G6DO95868 133 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 KRASP01116 189 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 IGKV1D-33P01593 117 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 IGKV1-33P01594 117 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 SNRPCP09234 159 aaKnown RBP3.59□□□□□ -1.83
CSMD3-205ENST00000462254 SAA1P0DJI8 122 aaPredicted RBP3.59□□□□□ -1.83
CSMD3-205ENST00000462254 VDAC1P21796 283 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 CDC34P49427 236 aaPredicted RBP3.59□□□□□ -1.83
CSMD3-205ENST00000462254 RAB13P51153 203 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 MFAP2P55001 183 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 PAX9P55771 341 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 NANOS2P60321 138 aaKnown RBP3.59□□□□□ -1.83
CSMD3-205ENST00000462254 SRPXP78539 464 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 IL15RAQ13261 267 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 EBI3Q14213 229 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 POU2AF1Q16633 256 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 RTL8BQ17RB0 113 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 MRGPRG-AS1Q2M3A8 158 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 DEFB112Q30KQ8 113 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 KIAA1644Q3SXP7 199 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 GSG1LQ6UXU4 331 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 RBMS3Q6XE24 437 aaKnown RBP3.59□□□□□ -1.83
CSMD3-205ENST00000462254 PUSL1Q8N0Z8 303 aaKnown RBP3.59□□□□□ -1.83
CSMD3-205ENST00000462254 Q8N6K4 173 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 OR10G7Q8NGN6 311 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 OR4C13Q8NGP0 309 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 PIFOQ8TCI5 191 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 BAALCQ8WXS3 180 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 C22orf15Q8WYQ4 148 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 LSM10Q969L4 123 aaKnown RBP3.59□□□□□ -1.83
CSMD3-205ENST00000462254 GPR146Q96CH1 333 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 OR2A7Q96R45 310 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 CHIAQ9BZP6 476 aa3.59□□□□□ -1.83
CSMD3-205ENST00000462254 ZNF436Q9C0F3 470 aaPredicted RBP3.59□□□□□ -1.83
CSMD3-205ENST00000462254 MXRA5Q9NR99 2828 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 SONP18583 2426 aaKnown RBP3.58□□□□□ -1.84
CSMD3-205ENST00000462254 TRAV14DV4A0A0A6YYC5 116 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 C15orf61A6NNL5 157 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 PPP1R2P9O14990 202 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 MRPS12O15235 138 aaKnown RBP3.58□□□□□ -1.84
CSMD3-205ENST00000462254 PITX3O75364 302 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 CCNKO75909 580 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 KBTBD11O94819 623 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 NXPH4O95158 308 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 NDUFA3O95167 84 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 HRASP01112 189 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 IFNA21P01568 189 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 PRSS1P07477 247 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 FBP1P09467 338 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 GIPP09681 153 aaPredicted RBP3.58□□□□□ -1.84
CSMD3-205ENST00000462254 CD99P14209 185 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 OR2B8PP59922 312 aa3.58□□□□□ -1.84
CSMD3-205ENST00000462254 KIAA0141Q14154 515 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms