RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ARL2-SNX15V9GYD0 113 aa12.54□□□□□ -0.4
LMNB1-203ENST00000460265 TRAV9-2A0A087WT02 112 aa12.54□□□□□ -0.4
LMNB1-203ENST00000460265 E7EQL1 145 aa12.54□□□□□ -0.4
LMNB1-203ENST00000460265 COX7A2P2O60397 106 aa12.54□□□□□ -0.4
LMNB1-203ENST00000460265 HSBP1O75506 76 aa12.54□□□□□ -0.4
LMNB1-203ENST00000460265 RHOGP84095 191 aa12.54□□□□□ -0.4
LMNB1-203ENST00000460265 VMA21Q3ZAQ7 101 aa12.54□□□□□ -0.4
LMNB1-203ENST00000460265 NPIPB3Q92617 1050 aa12.54□□□□□ -0.4
LMNB1-203ENST00000460265 RPEQ96AT9 228 aa12.54□□□□□ -0.4
LMNB1-203ENST00000460265 TMEM178BH3BS89 294 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 H3BTX0 84 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 MPDU1O75352 247 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 ARF6P62330 175 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 RPEL1Q2QD12 228 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 NHLRC2Q8NBF2 726 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 THBDP07204 575 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 IGLL1P15814 213 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 C19orf35Q6ZS72 473 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 MMD2Q8IY49 270 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 AP1S3Q96PC3 154 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 COL27A1Q8IZC6 1860 aaPredicted RBP12.53□□□□□ -0.4
LMNB1-203ENST00000460265 RELNP78509 3460 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 TEX50A0A1B0GTY4 177 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 PMS2P5A8MQ11 134 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 GNG7O60262 68 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 CRYBB3P26998 211 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 SUB1P53999 127 aaKnown RBP eCLIP12.53□□□□□ -0.49e-13■■■■■ 27.4
LMNB1-203ENST00000460265 NHLH1Q02575 133 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 Q8NA96 180 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 ZC2HC1AQ96GY0 325 aa12.53□□□□□ -0.4
LMNB1-203ENST00000460265 UPK2O00526 184 aa12.52□□□□□ -0.4
LMNB1-203ENST00000460265 TAX1BP3O14907 124 aa12.52□□□□□ -0.4
LMNB1-203ENST00000460265 EFNB3Q15768 340 aa12.52□□□□□ -0.4
LMNB1-203ENST00000460265 MYO18BQ8IUG5 2567 aa12.52□□□□□ -0.41
LMNB1-203ENST00000460265 GCHFRP30047 84 aa12.52□□□□□ -0.41
LMNB1-203ENST00000460265 OR4C13Q8NGP0 309 aa12.52□□□□□ -0.41
LMNB1-203ENST00000460265 TP73-AS1Q9UF72 201 aa12.52□□□□□ -0.41
LMNB1-203ENST00000460265 MUC21A0A0G2JKD1 596 aa12.52□□□□□ -0.41
LMNB1-203ENST00000460265 MUC21A0A140T8X8 626 aa12.52□□□□□ -0.41
LMNB1-203ENST00000460265 GAGE10A6NGK3 116 aa12.52□□□□□ -0.41
LMNB1-203ENST00000460265 APOBEC3AP31941 199 aaPredicted RBP12.52□□□□□ -0.41
LMNB1-203ENST00000460265 NBL1P41271 181 aa12.52□□□□□ -0.41
LMNB1-203ENST00000460265 GATA4P43694 442 aa12.52□□□□□ -0.41
LMNB1-203ENST00000460265 VDAC2P45880 294 aaPredicted RBP12.52□□□□□ -0.41
LMNB1-203ENST00000460265 PSG9Q00887 426 aa12.52□□□□□ -0.41
LMNB1-203ENST00000460265 MUC21Q5SSG8 566 aa12.52□□□□□ -0.41
LMNB1-203ENST00000460265 IGFBPL1Q8WX77 278 aa12.52□□□□□ -0.41
LMNB1-203ENST00000460265 LINC00869P0C866 280 aa12.51□□□□□ -0.41
LMNB1-203ENST00000460265 RPS20P60866 119 aaKnown RBP12.51□□□□□ -0.41
LMNB1-203ENST00000460265 UBE2L3P68036 154 aaKnown RBP12.51□□□□□ -0.41
LMNB1-203ENST00000460265 MRPL54Q6P161 138 aaKnown RBP12.51□□□□□ -0.41
LMNB1-203ENST00000460265 LRBAP50851 2863 aa12.51□□□□□ -0.41
LMNB1-203ENST00000460265 OR1B1Q8NGR6 318 aa12.51□□□□□ -0.41
LMNB1-203ENST00000460265 MOSP00540 346 aa12.5□□□□□ -0.41
LMNB1-203ENST00000460265 TAS2R45P59539 299 aa12.5□□□□□ -0.41
LMNB1-203ENST00000460265 TIGITQ495A1 244 aa12.5□□□□□ -0.41
LMNB1-203ENST00000460265 SLC25A48Q6ZT89 311 aaKnown RBP12.5□□□□□ -0.41
LMNB1-203ENST00000460265 TRBV20OR9-2A0A075B6H5 130 aa12.5□□□□□ -0.41
LMNB1-203ENST00000460265 M0R2Z0 102 aa12.5□□□□□ -0.41
LMNB1-203ENST00000460265 P0C879 139 aa12.5□□□□□ -0.41
LMNB1-203ENST00000460265 SAMD13Q5VXD3 122 aa12.5□□□□□ -0.41
LMNB1-203ENST00000460265 IGF2-ASQ6U949 168 aa12.5□□□□□ -0.41
LMNB1-203ENST00000460265 OR4F17Q8NGA8 305 aa12.5□□□□□ -0.41
LMNB1-203ENST00000460265 TMEM186Q96B77 213 aa12.5□□□□□ -0.41
LMNB1-203ENST00000460265 SMG1Q96Q15 3661 aaKnown RBP12.5□□□□□ -0.41
LMNB1-203ENST00000460265 TRAV5A0A0B4J249 113 aa12.5□□□□□ -0.41
LMNB1-203ENST00000460265 FXYD3Q14802 87 aa12.5□□□□□ -0.41
LMNB1-203ENST00000460265 NOTCH3Q9UM47 2321 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 DOPEY2Q9Y3R5 2298 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 HELTA6NFD8 242 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 GNG4P50150 75 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 EIF4EBP1Q13541 118 aaPredicted RBP12.49□□□□□ -0.41
LMNB1-203ENST00000460265 LY6DQ14210 128 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.49□□□□□ -0.41
LMNB1-203ENST00000460265 NUP37Q8NFH4 326 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 VSTM2AQ8TAG5 236 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 TECRQ9NZ01 308 aaKnown RBP12.49□□□□□ -0.41
LMNB1-203ENST00000460265 S4R3C0 116 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 USP9YO00507 2555 aaPredicted RBP12.49□□□□□ -0.41
LMNB1-203ENST00000460265 PPIAL4CA0A0B4J2A2 164 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 RBP4P02753 201 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 PPIAL4GP0DN37 164 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 LGALS4P56470 323 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 OR10J3Q5JRS4 329 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 WDR73Q6P4I2 378 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 TSKUQ8WUA8 353 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 CHRDL1Q9BU40 450 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 MRPL27Q9P0M9 148 aaKnown RBP12.49□□□□□ -0.41
LMNB1-203ENST00000460265 PAX2Q02962 417 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 PQLC2Q6ZP29 291 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 GNB1LQ9BYB4 327 aa12.49□□□□□ -0.41
LMNB1-203ENST00000460265 K7ENP7 123 aa12.48□□□□□ -0.41
LMNB1-203ENST00000460265 CA7P43166 264 aa12.48□□□□□ -0.41
LMNB1-203ENST00000460265 TMPRSS3P57727 454 aa12.48□□□□□ -0.41
LMNB1-203ENST00000460265 ASPHD1Q5U4P2 390 aa12.48□□□□□ -0.41
LMNB1-203ENST00000460265 C12orf54Q6X4T0 127 aa12.48□□□□□ -0.41
LMNB1-203ENST00000460265 FER1L6-AS1Q8NA97 138 aa12.48□□□□□ -0.41
LMNB1-203ENST00000460265 OR52E5Q8NH55 327 aa12.48□□□□□ -0.41
LMNB1-203ENST00000460265 TIMD4Q96H15 378 aa12.48□□□□□ -0.41
LMNB1-203ENST00000460265 COL12A1Q99715 3063 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms