RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 HYLS1Q96M11 299 aa4.06□□□□□ -1.76
HMGB1P4-201ENST00000455362 RCHY1Q96PM5 261 aa4.06□□□□□ -1.76
HMGB1P4-201ENST00000455362 SPIN2AQ99865 258 aa4.06□□□□□ -1.76
HMGB1P4-201ENST00000455362 SPIN2BQ9BPZ2 258 aa4.06□□□□□ -1.76
HMGB1P4-201ENST00000455362 COMMD9Q9P000 198 aa4.06□□□□□ -1.76
HMGB1P4-201ENST00000455362 AMMECR1Q9Y4X0 333 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P4-201ENST00000455362 MINOS1-NBL1R4GNA1 71 aa4.06□□□□□ -1.76
HMGB1P4-201ENST00000455362 IGHV1-3A0A0C4DH29 117 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 CENPVL3A0A0U1RRI6 287 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 HMSDA8MTL9 139 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 OOSP1A8MZH6 123 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 H7C2Y5 167 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 HRASP01112 189 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 APOA2P02652 100 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 RLN2P04090 185 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 LEPP41159 167 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 AKR1C2P52895 323 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 OR5I1Q13606 314 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 SMCO1Q147U7 214 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 POU2AF1Q16633 256 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 TMEM249Q2WGJ8 235 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 LAMTOR1Q6IAA8 161 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 C11orf87Q6NUJ2 197 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 ZNF546Q86UE3 836 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 PDPNQ86YL7 162 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 VKORC1L1Q8N0U8 176 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 DYNAPQ8N1N2 210 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 MAPK1IP1LQ8NDC0 245 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 WFDC11Q8NEX6 87 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 OR1S1Q8NH92 325 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 RNASE11Q8TAA1 199 aaKnown RBP4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 RPEQ96AT9 228 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 FLYWCH2Q96CP2 140 aaKnown RBP4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 FAM218AQ96MZ4 157 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 FOXC2Q99958 501 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 MAP1LC3CQ9BXW4 147 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 CLEC5AQ9NY25 188 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 COA4Q9NYJ1 87 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 CACNG5Q9UF02 275 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 WASHC3Q9Y3C0 194 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 TBL2Q9Y4P3 447 aaKnown RBP4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 HILPDAQ9Y5L2 63 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 AUP1Q9Y679 476 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 NSD1Q96L73 2696 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 ANK3Q12955 4377 aaKnown RBP4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 FXYD6-FXYD2A0A087WZ82 144 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 IGHV3-72A0A0B4J1Y9 119 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 TRAV3A0A0B4J244 114 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 IGHV1-69DA0A0B4J2H0 117 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 J3QLI3 93 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 K7EPK0 472 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 UPK2O00526 184 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 NPFFO15130 113 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 NUPL2O15504 423 aaKnown RBP4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 DEDDO75618 318 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 SNAPC5O75971 98 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 IGLV2-23P01705 113 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 IGHV1-69P01742 117 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 CXCL2P19875 107 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 PAX6P26367 422 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 LGALS7P47929 136 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 RAB13P51153 203 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 AP2S1P53680 142 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 UBE2G2P60604 165 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 S100A10P60903 97 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 ERVK-16P61578 105 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 LGALSLQ3ZCW2 172 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 PVRIGQ6DKI7 326 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 PRSS54Q6PEW0 395 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 ACOT7LQ6ZUV0 252 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 PUSL1Q8N0Z8 303 aaKnown RBP4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 CIARTQ8N365 385 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 C9orf62Q8N4C0 152 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 FAM71E2Q8N5Q1 922 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 OR4C13Q8NGP0 309 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 GRPEL2Q8TAA5 225 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 MALSU1Q96EH3 234 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 RNF5Q99942 180 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 PARD6GQ9BYG4 376 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 PPDPFQ9H3Y8 114 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 SAV1Q9H4B6 383 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 C11orf1Q9H5F2 150 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 RETNQ9HD89 108 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 ZFP57Q9NU63 452 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 OR5AC2Q9NZP5 309 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 TNFSF18Q9UNG2 199 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 LSM5Q9Y4Y9 91 aaKnown RBP4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 HSPB11Q9Y547 144 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 HIVEP2P31629 2446 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 MAST4O15021 2626 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 NIPBLQ6KC79 2804 aaeCLIP4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 IGHV3OR16-10A0A075B7F0 116 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 MSGN1A6NI15 193 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 ARPC5O15511 151 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 SYNGR2O43760 224 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 KBTBD11O94819 623 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 VENTXO95231 258 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 MOSP00540 346 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 PET100P0DJ07 73 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms