RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 MRPL32Q9BYC8 188 aaKnown RBP11.3□□□□□ -0.6
UBE2D3-210ENST00000453744 CST9LQ9H4G1 147 aa11.3□□□□□ -0.6
UBE2D3-210ENST00000453744 SMIM27A0A1W2PRY6 76 aa11.3□□□□□ -0.6
UBE2D3-210ENST00000453744 PRR7Q8TB68 274 aa11.3□□□□□ -0.6
UBE2D3-210ENST00000453744 FAM222BQ8WU58 562 aa11.3□□□□□ -0.6
UBE2D3-210ENST00000453744 GPR82Q96P67 336 aa11.3□□□□□ -0.6
UBE2D3-210ENST00000453744 AP5S1Q9NUS5 200 aa11.3□□□□□ -0.6
UBE2D3-210ENST00000453744 EPDR1Q9UM22 224 aa11.3□□□□□ -0.6
UBE2D3-210ENST00000453744 SRRM5B3KS81 715 aa11.3□□□□□ -0.6
UBE2D3-210ENST00000453744 LIPFP07098 398 aa11.3□□□□□ -0.6
UBE2D3-210ENST00000453744 CTRLP40313 264 aa11.3□□□□□ -0.6
UBE2D3-210ENST00000453744 VMA21Q3ZAQ7 101 aa11.3□□□□□ -0.6
UBE2D3-210ENST00000453744 WFDC8Q8IUA0 241 aa11.3□□□□□ -0.6
UBE2D3-210ENST00000453744 NEUROG1Q92886 237 aa11.3□□□□□ -0.6
UBE2D3-210ENST00000453744 NCKAP5O14513 1909 aa11.3□□□□□ -0.6
UBE2D3-210ENST00000453744 CEP295Q9C0D2 2601 aa11.3□□□□□ -0.6
UBE2D3-210ENST00000453744 SRRM4A7MD48 611 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-210ENST00000453744 MMP23AO75900 390 aa11.29□□□□□ -0.6
UBE2D3-210ENST00000453744 GPR183P32249 361 aa11.29□□□□□ -0.6
UBE2D3-210ENST00000453744 C19orf24Q9BVV8 132 aa11.29□□□□□ -0.6
UBE2D3-210ENST00000453744 TRAV30A0A087WSZ9 112 aa11.29□□□□□ -0.6
UBE2D3-210ENST00000453744 C7orf71A4D174 169 aa11.29□□□□□ -0.6
UBE2D3-210ENST00000453744 FAM90A9PA6NNJ1 464 aa11.29□□□□□ -0.6
UBE2D3-210ENST00000453744 H3BUT2 72 aa11.29□□□□□ -0.6
UBE2D3-210ENST00000453744 NKX2-8O15522 239 aa11.29□□□□□ -0.6
UBE2D3-210ENST00000453744 SPRNQ5BIV9 151 aa11.29□□□□□ -0.6
UBE2D3-210ENST00000453744 TMUB1Q9BVT8 246 aa11.29□□□□□ -0.6
UBE2D3-210ENST00000453744 COL4A2P08572 1712 aa11.29□□□□□ -0.6
UBE2D3-210ENST00000453744 IGLC7A0M8Q6 106 aa11.29□□□□□ -0.6
UBE2D3-210ENST00000453744 FAM87AP0C7U9 286 aa11.29□□□□□ -0.6
UBE2D3-210ENST00000453744 AARDQ4LEZ3 155 aa11.29□□□□□ -0.6
UBE2D3-210ENST00000453744 CIARTQ8N365 385 aaPredicted RBP11.29□□□□□ -0.6
UBE2D3-210ENST00000453744 TMEM14BQ9NUH8 114 aa11.29□□□□□ -0.6
UBE2D3-210ENST00000453744 GTF2H5Q6ZYL4 71 aa11.28□□□□□ -0.6
UBE2D3-210ENST00000453744 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.28□□□□□ -0.63e-7■■■■□ 19.8
UBE2D3-210ENST00000453744 GAGE12BA1L429 117 aa11.28□□□□□ -0.6
UBE2D3-210ENST00000453744 RNASE2P10153 161 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-210ENST00000453744 OCIAD2Q56VL3 154 aa11.28□□□□□ -0.6
UBE2D3-210ENST00000453744 Q8N976 141 aa11.28□□□□□ -0.6
UBE2D3-210ENST00000453744 PEF1Q9UBV8 284 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-210ENST00000453744 COL5A1P20908 1838 aaPredicted RBP11.28□□□□□ -0.6
UBE2D3-210ENST00000453744 IGHV1-18A0A0C4DH31 117 aa11.28□□□□□ -0.6
UBE2D3-210ENST00000453744 C21orf140B9A014 251 aa11.28□□□□□ -0.6
UBE2D3-210ENST00000453744 ITGB1BP1O14713 200 aa11.28□□□□□ -0.6
UBE2D3-210ENST00000453744 C1orf229Q6ZS94 237 aaPredicted RBP11.28□□□□□ -0.6
UBE2D3-210ENST00000453744 ZNF503Q96F45 646 aa11.28□□□□□ -0.6
UBE2D3-210ENST00000453744 S4R3C0 116 aa11.28□□□□□ -0.6
UBE2D3-210ENST00000453744 RBX1P62877 108 aa11.27□□□□□ -0.6
UBE2D3-210ENST00000453744 PSG9Q00887 426 aa11.27□□□□□ -0.6
UBE2D3-210ENST00000453744 ST20Q9HBF5 79 aa11.27□□□□□ -0.6
UBE2D3-210ENST00000453744 K7EQM0 130 aa11.27□□□□□ -0.61
UBE2D3-210ENST00000453744 WISP2O76076 250 aa11.27□□□□□ -0.61
UBE2D3-210ENST00000453744 TMPRSS3P57727 454 aa11.27□□□□□ -0.61
UBE2D3-210ENST00000453744 DYNLRB1Q9NP97 96 aa11.27□□□□□ -0.61
UBE2D3-210ENST00000453744 THYN1Q9P016 225 aa11.27□□□□□ -0.61
UBE2D3-210ENST00000453744 MALRD1Q5VYJ5 2156 aa11.27□□□□□ -0.61
UBE2D3-210ENST00000453744 DEFB109BQ30KR1 87 aa11.27□□□□□ -0.61
UBE2D3-210ENST00000453744 GDF5OSQ5U4N7 250 aa11.27□□□□□ -0.61
UBE2D3-210ENST00000453744 LOXL3P58215 753 aa11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 ZNF329Q86UD4 541 aa11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 FAM90A1Q86YD7 464 aa11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 STXBP6Q8NFX7 210 aa11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 VSTM2AQ8TAG5 236 aa11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 C18orf15Q96N68 181 aa11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 SLC25A2Q9BXI2 301 aa11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 RIGQ13278 110 aa11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 EIF4EBP1Q13541 118 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 RBPMS2Q6ZRY4 209 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 Q9H3A6 140 aa11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 FREM2Q5SZK8 3169 aa11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 IGHV1-24A0A0C4DH33 117 aa11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 IGHV2-70DA0A0C4DH43 119 aa11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 COX7A1P24310 79 aa11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 EXOC3-AS1Q8N2X6 119 aa11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 TEX45Q8NA69 505 aa11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 LRRC10Q5BKY1 277 aa11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 C1orf210Q8IVY1 113 aa11.26□□□□□ -0.61
UBE2D3-210ENST00000453744 A6NDN8 102 aa11.25□□□□□ -0.61
UBE2D3-210ENST00000453744 IGLV2-8P01709 118 aa11.25□□□□□ -0.61
UBE2D3-210ENST00000453744 KIR2DL2P43627 348 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-210ENST00000453744 C2orf83Q53S99 150 aa11.25□□□□□ -0.61
UBE2D3-210ENST00000453744 C1orf159Q96HA4 380 aa11.25□□□□□ -0.61
UBE2D3-210ENST00000453744 IGF2RP11717 2491 aa11.25□□□□□ -0.61
UBE2D3-210ENST00000453744 GCSHP23434 173 aa11.25□□□□□ -0.61
UBE2D3-210ENST00000453744 PTPN13Q12923 2485 aa11.25□□□□□ -0.61
UBE2D3-210ENST00000453744 LOC105371242A0A075B767 164 aa11.25□□□□□ -0.61
UBE2D3-210ENST00000453744 CDKN1BP46527 198 aa11.25□□□□□ -0.61
UBE2D3-210ENST00000453744 BVES-AS1Q5T3Y7 98 aa11.25□□□□□ -0.61
UBE2D3-210ENST00000453744 C5orf17Q8NAS9 161 aa11.25□□□□□ -0.61
UBE2D3-210ENST00000453744 CACNG8Q8WXS5 425 aa11.25□□□□□ -0.61
UBE2D3-210ENST00000453744 HIGD1AQ9Y241 93 aa11.25□□□□□ -0.61
UBE2D3-210ENST00000453744 ZNF257Q9Y2Q1 563 aa11.25□□□□□ -0.61
UBE2D3-210ENST00000453744 TCRBV4S1A1TA0A5B7 111 aa11.24□□□□□ -0.61
UBE2D3-210ENST00000453744 PRSS46E5RG02 174 aa11.24□□□□□ -0.61
UBE2D3-210ENST00000453744 NDUFB3O43676 98 aa11.24□□□□□ -0.61
UBE2D3-210ENST00000453744 PRSS1P07477 247 aa11.24□□□□□ -0.61
UBE2D3-210ENST00000453744 OR10AG1Q8NH19 301 aa11.24□□□□□ -0.61
UBE2D3-210ENST00000453744 HES1Q14469 280 aa11.24□□□□□ -0.61
UBE2D3-210ENST00000453744 C17orf58Q2M2W7 97 aa11.24□□□□□ -0.61
UBE2D3-210ENST00000453744 FDCSPQ8NFU4 85 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms