RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 GNG5P63218 68 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 ZNF600Q6ZNG1 722 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 PERPQ96FX8 193 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 TRGV9Q99603 122 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 RNASE7Q9H1E1 156 aaKnown RBP9.34□□□□□ -0.91
VTA1-203ENST00000452973 SRD5A3Q9H8P0 318 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 CSMD2Q7Z408 3487 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 ELOA3CA0A087WX78 387 aaPredicted RBP9.33□□□□□ -0.92
VTA1-203ENST00000452973 A0A1W2PRE2 83 aa9.33□□□□□ -0.92
VTA1-203ENST00000452973 I3L2K1 104 aa9.33□□□□□ -0.92
VTA1-203ENST00000452973 NDPQ00604 133 aa9.33□□□□□ -0.92
VTA1-203ENST00000452973 C11orf52Q96A22 123 aa9.33□□□□□ -0.92
VTA1-203ENST00000452973 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.33□□□□□ -0.921e-6■■■■□ 23.5
VTA1-203ENST00000452973 SH2D7A6NKC9 451 aaPredicted RBP9.33□□□□□ -0.92
VTA1-203ENST00000452973 NDUFS6O75380 124 aaKnown RBP9.33□□□□□ -0.92
VTA1-203ENST00000452973 IGLC1P0CG04 106 aa9.33□□□□□ -0.92
VTA1-203ENST00000452973 SAA4P35542 130 aa9.33□□□□□ -0.92
VTA1-203ENST00000452973 SRP14P37108 136 aaKnown RBP9.33□□□□□ -0.92
VTA1-203ENST00000452973 TBX15Q96SF7 602 aa9.33□□□□□ -0.92
VTA1-203ENST00000452973 CCL19Q99731 98 aa9.33□□□□□ -0.92
VTA1-203ENST00000452973 GPR61Q9BZJ8 451 aa9.33□□□□□ -0.92
VTA1-203ENST00000452973 PPP1R2P9O14990 202 aa9.32□□□□□ -0.92
VTA1-203ENST00000452973 C1orf122Q6ZSJ8 110 aa9.32□□□□□ -0.92
VTA1-203ENST00000452973 NPBQ8NG41 125 aa9.32□□□□□ -0.92
VTA1-203ENST00000452973 ARPC1AQ92747 370 aa9.32□□□□□ -0.92
VTA1-203ENST00000452973 FXYD5Q96DB9 178 aa9.32□□□□□ -0.92
VTA1-203ENST00000452973 SERTAD4Q9NUC0 356 aa9.32□□□□□ -0.92
VTA1-203ENST00000452973 K7EIM0 57 aa9.32□□□□□ -0.92
VTA1-203ENST00000452973 RD3LP0DJH9 198 aa9.32□□□□□ -0.92
VTA1-203ENST00000452973 HOXA5P20719 270 aa9.32□□□□□ -0.92
VTA1-203ENST00000452973 SLC35B1P78383 322 aa9.32□□□□□ -0.92
VTA1-203ENST00000452973 LURAP1LQ8IV03 231 aa9.32□□□□□ -0.92
VTA1-203ENST00000452973 NRGNQ92686 78 aa9.32□□□□□ -0.92
VTA1-203ENST00000452973 PYGO2Q9BRQ0 406 aa9.32□□□□□ -0.92
VTA1-203ENST00000452973 PGPA6NDG6 321 aa9.32□□□□□ -0.92
VTA1-203ENST00000452973 NDUFA3O95167 84 aa9.32□□□□□ -0.92
VTA1-203ENST00000452973 PAX2Q02962 417 aa9.32□□□□□ -0.92
VTA1-203ENST00000452973 GGCTO75223 188 aaKnown RBP9.31□□□□□ -0.92
VTA1-203ENST00000452973 SLC25A5P05141 298 aaKnown RBP9.31□□□□□ -0.92
VTA1-203ENST00000452973 NBEAP1P0C6P0 100 aa9.31□□□□□ -0.92
VTA1-203ENST00000452973 CD99P14209 185 aa9.31□□□□□ -0.92
VTA1-203ENST00000452973 TCL1AP56279 114 aa9.31□□□□□ -0.92
VTA1-203ENST00000452973 PRR27Q6MZM9 219 aa9.31□□□□□ -0.92
VTA1-203ENST00000452973 HIGD1AQ9Y241 93 aa9.31□□□□□ -0.92
VTA1-203ENST00000452973 IFITM10A6NMD0 228 aa9.31□□□□□ -0.92
VTA1-203ENST00000452973 C9JCJ5 164 aa9.31□□□□□ -0.92
VTA1-203ENST00000452973 IGKV1-17P01599 117 aa9.31□□□□□ -0.92
VTA1-203ENST00000452973 PVRIGQ6DKI7 326 aa9.31□□□□□ -0.92
VTA1-203ENST00000452973 IGHV3-35A0A0C4DH35 117 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 OVOL3O00110 214 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 GNG7O60262 68 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 S100A2P29034 98 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 CDX1P47902 265 aaPredicted RBP9.3□□□□□ -0.92
VTA1-203ENST00000452973 PDLIM4P50479 330 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 MINOS1Q5TGZ0 78 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 ZNF562Q6V9R5 426 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 ZNF329Q86UD4 541 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 FAM168AQ92567 244 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 TMUB1Q9BVT8 246 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 MINOS1-NBL1R4GNA1 71 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 TMEM8BA6NDV4 472 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 OR2J3O76001 311 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 CA1P00915 261 aaPredicted RBP9.3□□□□□ -0.92
VTA1-203ENST00000452973 S100A8P05109 93 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 FAM106CPP0CH98 169 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 FABP4P15090 132 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 UBE2E1P51965 193 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 ATP5J2P56134 94 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 PIP4P2Q8N4L2 257 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 NIT2Q9NQR4 276 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 ARL2-SNX15V9GYD0 113 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 USP9YO00507 2555 aaPredicted RBP9.3□□□□□ -0.92
VTA1-203ENST00000452973 IGHV3OR16-8A0A075B7F1 116 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 ISLRO14498 428 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 PHOX2AO14813 284 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 TGOLN2O43493 480 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 CNN1P51911 297 aaKnown RBP9.3□□□□□ -0.92
VTA1-203ENST00000452973 ECSCRQ19T08 205 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 Q56UQ5 140 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 BRD3OSQ6XYD6 125 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 OR10D4PQ8NGN7 298 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 GAR1Q9NY12 217 aaKnown RBP9.3□□□□□ -0.92
VTA1-203ENST00000452973 TRAPPC1Q9Y5R8 145 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 ABCA2Q9BZC7 2435 aa9.3□□□□□ -0.92
VTA1-203ENST00000452973 IGHV4-61A0A0C4DH41 118 aa9.29□□□□□ -0.92
VTA1-203ENST00000452973 XKRY2A2RUG3 117 aa9.29□□□□□ -0.92
VTA1-203ENST00000452973 PEX7O00628 323 aa9.29□□□□□ -0.92
VTA1-203ENST00000452973 IL4P05112 153 aa9.29□□□□□ -0.92
VTA1-203ENST00000452973 FRMD6-AS1P0C7T7 363 aa9.29□□□□□ -0.92
VTA1-203ENST00000452973 OR8I2Q8N0Y5 310 aa9.29□□□□□ -0.92
VTA1-203ENST00000452973 SLC25A39Q9BZJ4 359 aaPredicted RBP9.29□□□□□ -0.92
VTA1-203ENST00000452973 CSPG4Q6UVK1 2322 aa9.29□□□□□ -0.92
VTA1-203ENST00000452973 TMEM219Q86XT9 240 aa9.29□□□□□ -0.92
VTA1-203ENST00000452973 BAGE2Q86Y30 109 aa9.29□□□□□ -0.92
VTA1-203ENST00000452973 BCL6BQ8N143 479 aaPredicted RBP9.29□□□□□ -0.92
VTA1-203ENST00000452973 HSPB9Q9BQS6 159 aa9.29□□□□□ -0.92
VTA1-203ENST00000452973 CBLN1P23435 193 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 FOXL1Q12952 345 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 STXBP6Q8NFX7 210 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 FANCD2OSQ96PS1 177 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms