RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 COTL1Q14019 142 aa8.37□□□□□ -1.07
SCN10A-201ENST00000449082 CYSLTR1Q9Y271 337 aa8.37□□□□□ -1.07
SCN10A-201ENST00000449082 Q6P435 159 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 KLHL30-AS1Q8NEE0 82 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 KLHDC3Q9BQ90 382 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 SLC25A39Q9BZJ4 359 aaPredicted RBP8.36□□□□□ -1.07
SCN10A-201ENST00000449082 NXT2Q9NPJ8 142 aaKnown RBP8.36□□□□□ -1.07
SCN10A-201ENST00000449082 KIF26BQ2KJY2 2108 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 GHRHP01286 108 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 RPL15P61313 204 aaKnown RBP8.36□□□□□ -1.07
SCN10A-201ENST00000449082 ZNF415Q09FC8 603 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 ORMDL2Q53FV1 153 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 INTS1Q8N201 2190 aaKnown RBP8.36□□□□□ -1.07
SCN10A-201ENST00000449082 FOXL2NBQ6ZUU3 175 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 GLRX5Q86SX6 157 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 CHCHD5Q9BSY4 110 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 IGKV1D-17A0A075B6S4 117 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 ADARB2-AS1A8MUL3 147 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 F8VVB4 439 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 F8VWA3 439 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 LCNL1Q6ZST4 164 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 LHFPL1Q86WI0 220 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 PMS2P5A8MQ11 134 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 PPIFP30405 207 aaKnown RBP8.36□□□□□ -1.07
SCN10A-201ENST00000449082 IGFL3Q6UXB1 125 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 LYPD2Q6UXB3 125 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 DTX1Q86Y01 620 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 C3orf56Q8N813 242 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 RCHY1Q96PM5 261 aa8.36□□□□□ -1.07
SCN10A-201ENST00000449082 TRAV5A0A0B4J249 113 aa8.35□□□□□ -1.07
SCN10A-201ENST00000449082 IGKV3D-20A0A0C4DH25 116 aa8.35□□□□□ -1.07
SCN10A-201ENST00000449082 C1QTNF9P0C862 333 aa8.35□□□□□ -1.07
SCN10A-201ENST00000449082 C9orf139Q6ZV77 190 aa8.35□□□□□ -1.07
SCN10A-201ENST00000449082 GGTLC1Q9BX51 225 aa8.35□□□□□ -1.07
SCN10A-201ENST00000449082 SEPSECSQ9HD40 501 aaKnown RBP8.35□□□□□ -1.07
SCN10A-201ENST00000449082 SIP14410 1827 aa8.35□□□□□ -1.07
SCN10A-201ENST00000449082 H0YIZ8 118 aa8.35□□□□□ -1.07
SCN10A-201ENST00000449082 PRTN3P24158 256 aa8.35□□□□□ -1.07
SCN10A-201ENST00000449082 PRR30Q53SZ7 412 aaPredicted RBP8.35□□□□□ -1.07
SCN10A-201ENST00000449082 SIGLEC9Q9Y336 463 aa8.35□□□□□ -1.07
SCN10A-201ENST00000449082 RNF223E7ERA6 249 aa8.35□□□□□ -1.07
SCN10A-201ENST00000449082 LDLRAD4O15165 306 aa8.35□□□□□ -1.07
SCN10A-201ENST00000449082 MSMBP08118 114 aa8.35□□□□□ -1.07
SCN10A-201ENST00000449082 CD28P10747 220 aa8.35□□□□□ -1.07
SCN10A-201ENST00000449082 MBD3L1Q8WWY6 194 aa8.35□□□□□ -1.07
SCN10A-201ENST00000449082 MGAMO43451 1857 aa8.35□□□□□ -1.07
SCN10A-201ENST00000449082 SAA4P35542 130 aa8.35□□□□□ -1.07
SCN10A-201ENST00000449082 C1QTNF4Q9BXJ3 329 aa8.35□□□□□ -1.07
SCN10A-201ENST00000449082 VWA8A3KMH1 1905 aa8.35□□□□□ -1.07
SCN10A-201ENST00000449082 IGKV2-40A0A087WW87 121 aaPredicted RBP8.34□□□□□ -1.07
SCN10A-201ENST00000449082 A6NNC1 897 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 NPIPB5A8MRT5 1133 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 IGKV2D-40P01614 121 aaPredicted RBP8.34□□□□□ -1.07
SCN10A-201ENST00000449082 Q5PR19 223 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 COQ2Q96H96 371 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 SCRT1Q9BWW7 348 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 WFDC1Q9HC57 220 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 SLC25A20O43772 301 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 LY6HO94772 140 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 PLXNA3P51805 1871 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 LINC01549A6NIU2 74 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 A8MXK9 166 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 HBDP02042 147 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 PLA2G2CQ5R387 149 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 OCC1Q8TAD7 63 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 SSBP4Q9BWG4 385 aaPredicted RBP8.34□□□□□ -1.07
SCN10A-201ENST00000449082 ZNF688P0C7X2 276 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 FAM19A2Q8N3H0 131 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 TSKUQ8WUA8 353 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 C5orf63A6NC05 138 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 RPL35AP18077 110 aaKnown RBP8.34□□□□□ -1.07
SCN10A-201ENST00000449082 NUDT11Q96G61 164 aa8.34□□□□□ -1.07
SCN10A-201ENST00000449082 J3QKU1 62 aa8.33□□□□□ -1.08
SCN10A-201ENST00000449082 LINC00477Q96M19 166 aa8.33□□□□□ -1.08
SCN10A-201ENST00000449082 SRSF8Q9BRL6 282 aaKnown RBP8.33□□□□□ -1.08
SCN10A-201ENST00000449082 PEF1Q9UBV8 284 aaKnown RBP8.33□□□□□ -1.08
SCN10A-201ENST00000449082 TRAV3A0A0B4J244 114 aa8.33□□□□□ -1.08
SCN10A-201ENST00000449082 STAG3L3P0CL85 134 aa8.33□□□□□ -1.08
SCN10A-201ENST00000449082 HGFACQ04756 655 aa8.33□□□□□ -1.08
SCN10A-201ENST00000449082 ZNF329Q86UD4 541 aa8.33□□□□□ -1.08
SCN10A-201ENST00000449082 KIR3DL3Q8N743 410 aa8.33□□□□□ -1.08
SCN10A-201ENST00000449082 DMRT1Q9Y5R6 373 aa8.33□□□□□ -1.08
SCN10A-201ENST00000449082 SELENOKQ9Y6D0 94 aa8.33□□□□□ -1.08
SCN10A-201ENST00000449082 ZNF138P52744 262 aa8.33□□□□□ -1.08
SCN10A-201ENST00000449082 ACTL10Q5JWF8 245 aa8.33□□□□□ -1.08
SCN10A-201ENST00000449082 FREM3P0C091 2139 aa8.33□□□□□ -1.08
SCN10A-201ENST00000449082 A0A087WX48 190 aa8.33□□□□□ -1.08
SCN10A-201ENST00000449082 KLF17Q5JT82 389 aaPredicted RBP8.33□□□□□ -1.08
SCN10A-201ENST00000449082 LHFPL4Q7Z7J7 247 aa8.33□□□□□ -1.08
SCN10A-201ENST00000449082 RNF182Q8N6D2 247 aa8.33□□□□□ -1.08
SCN10A-201ENST00000449082 PARD6GQ9BYG4 376 aaPredicted RBP8.33□□□□□ -1.08
SCN10A-201ENST00000449082 ATP5L2Q7Z4Y8 100 aa8.33□□□□□ -1.08
SCN10A-201ENST00000449082 COL4A6Q14031 1691 aa8.33□□□□□ -1.08
SCN10A-201ENST00000449082 LINC00614P0C842 121 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 ADMP35318 185 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 NDPQ00604 133 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 C14orf144Q96I85 54 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 MGST2Q99735 147 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 VSIRQ9H7M9 311 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 CNOT1A5YKK6 2376 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms