RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 FGF6P10767 208 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 LINC00477Q96M19 166 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 IGHV5-51A0A0C4DH38 117 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 A6NNC1 897 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 B5MCH6 92 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 PDFQ9HBH1 243 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 SMAD7O15105 426 aaKnown RBP7.5□□□□□ -1.21
NIPBL-202ENST00000448238 UCP1P25874 307 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 ALKAL1Q6UXT8 129 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 C8orf46Q8TAG6 207 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 MESP1Q9BRJ9 268 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 PRO1854Q9UHT4 67 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 TRBV24-1A0A075B6N3 115 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 CDKN1AP38936 164 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 GNG5P63218 68 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 ZPLD1Q8TCW7 415 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 THBDP07204 575 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 TCF15Q12870 199 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 HEPN1Q6WQI6 88 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 CT55Q8WUE5 264 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 TCRBV4S1A1TA0A5B7 111 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 IGKV1D-33P01593 117 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 IGKV1-33P01594 117 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 AMBPP02760 352 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 VPREB1P12018 145 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 AZU1P20160 251 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 SPXQ9BT56 116 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 ERVH48-1M5A8F1 160 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 HOXB3P14651 431 aaPredicted RBP7.49□□□□□ -1.21
NIPBL-202ENST00000448238 LINC01545Q5VT33 79 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 ATP5G1P05496 136 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 ATP5G3P48201 142 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 C1orf100Q5SVJ3 147 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 TRPT1Q86TN4 253 aaKnown RBP7.49□□□□□ -1.21
NIPBL-202ENST00000448238 TMEM141Q96I45 108 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 IGHV1-24A0A0C4DH33 117 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 A8MWP6 167 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 K7EP13 123 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 IGFBP3P17936 291 aaPredicted RBP7.49□□□□□ -1.21
NIPBL-202ENST00000448238 H2BFSP57053 126 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 IGHV1OR21-1A0A087WYE8 117 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 MYF5P13349 255 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 CD200R1LQ6Q8B3 271 aa7.49□□□□□ -1.21
NIPBL-202ENST00000448238 LSM4Q9Y4Z0 139 aaKnown RBP7.49□□□□□ -1.21
NIPBL-202ENST00000448238 FAM240AA0A1B0GVK7 77 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 EFEMP2O95967 443 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 CGB3P0DN86 165 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 TRGV1A0A0A0MS02 117 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 PYY3Q5JQD4 70 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 ZC2HC1BQ5TFG8 222 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 FAM90A1Q86YD7 464 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 PRB4P10163 310 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-202ENST00000448238 ZNF708P17019 499 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 ETDBQ3ZM63 59 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 Q96M66 194 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 TIMP3P35625 211 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 C1QL3Q5VWW1 255 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 DUX4L9Q6RFH8 374 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-202ENST00000448238 SCRT1Q9BWW7 348 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 MSGN1A6NI15 193 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 PSG4Q00888 419 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 MORN5Q5VZ52 161 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 SMRP1Q8NCR6 262 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 TRPM7Q96QT4 1865 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 ORMDL1Q9P0S3 153 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 LRRC37A3O60309 1634 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 CSTL1Q9H114 145 aa7.48□□□□□ -1.21
NIPBL-202ENST00000448238 CEACAM1P13688 526 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 PAX8Q06710 450 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 GLMPQ8WWB7 406 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 IMMP1LQ96LU5 166 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 LIME1Q9H400 295 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 FGF11Q92914 225 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 NBR2O15453 112 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 PSMB8P28062 276 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 PEBP1P30086 187 aaKnown RBP7.47□□□□□ -1.21
NIPBL-202ENST00000448238 PRCDQ00LT1 54 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 RNF166Q96A37 237 aaPredicted RBP7.47□□□□□ -1.21
NIPBL-202ENST00000448238 CASC2Q6XLA1 102 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 HIST3H2BBQ8N257 126 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 FOCADQ5VW36 1801 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 CTSBP07858 339 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 CXCL5P42830 114 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 FAM168AQ92567 244 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 RETNQ9HD89 108 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 ZNF138P52744 262 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 TMEM52Q8NDY8 209 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 FBLN5Q9UBX5 448 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 TEX38Q6PEX7 206 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 SPSB3Q6PJ21 355 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 UCN2Q96RP3 112 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 PILRAQ9UKJ1 303 aa7.47□□□□□ -1.21
NIPBL-202ENST00000448238 TRBV25-1A0A075B6N4 114 aa7.46□□□□□ -1.21
NIPBL-202ENST00000448238 CTGFP29279 349 aa7.46□□□□□ -1.21
NIPBL-202ENST00000448238 ZFP2Q6ZN57 461 aa7.46□□□□□ -1.21
NIPBL-202ENST00000448238 GLRX5Q86SX6 157 aa7.46□□□□□ -1.21
NIPBL-202ENST00000448238 LOC105371267A0A1B0GV96 52 aa7.46□□□□□ -1.21
NIPBL-202ENST00000448238 SRSF2Q01130 221 aaKnown RBP7.46□□□□□ -1.21
NIPBL-202ENST00000448238 FHL5Q5TD97 284 aa7.46□□□□□ -1.21
NIPBL-202ENST00000448238 SPATA31B1PQ5VZV4 182 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms