RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 RTL1A6NKG5 1358 aa0.82□□□□□ -2.28
PFDN4-202ENST00000441080 PIK3C2GO75747 1445 aa0.81□□□□□ -2.28
PFDN4-202ENST00000441080 CCL25O15444 150 aa0.81□□□□□ -2.28
PFDN4-202ENST00000441080 GADD45GO95257 159 aa0.81□□□□□ -2.28
PFDN4-202ENST00000441080 DNAL4O96015 105 aa0.81□□□□□ -2.28
PFDN4-202ENST00000441080 SRIP30626 198 aa0.81□□□□□ -2.28
PFDN4-202ENST00000441080 CDKN2CP42773 168 aa0.81□□□□□ -2.28
PFDN4-202ENST00000441080 MYL6P60660 151 aa0.81□□□□□ -2.28
PFDN4-202ENST00000441080 FAM74A1Q5RGS3 127 aa0.81□□□□□ -2.28
PFDN4-202ENST00000441080 Q8N6K4 173 aa0.81□□□□□ -2.28
PFDN4-202ENST00000441080 OR52L1Q8NGH7 329 aa0.81□□□□□ -2.28
PFDN4-202ENST00000441080 PRADC1Q9BSG0 188 aa0.81□□□□□ -2.28
PFDN4-202ENST00000441080 TMEM133Q9H2Q1 129 aa0.81□□□□□ -2.28
PFDN4-202ENST00000441080 ZNF469Q96JG9 3925 aaPredicted RBP0.81□□□□□ -2.28
PFDN4-202ENST00000441080 ZFYVE9O95405 1425 aa0.81□□□□□ -2.28
PFDN4-202ENST00000441080 ECM29Q5VYK3 1845 aa0.8□□□□□ -2.28
PFDN4-202ENST00000441080 TENM3Q9P273 2699 aa0.8□□□□□ -2.28
PFDN4-202ENST00000441080 NCR3O14931 201 aa0.8□□□□□ -2.28
PFDN4-202ENST00000441080 HAND1O96004 215 aa0.8□□□□□ -2.28
PFDN4-202ENST00000441080 DHFRP00374 187 aa0.8□□□□□ -2.28
PFDN4-202ENST00000441080 DYNLT1P63172 113 aa0.8□□□□□ -2.28
PFDN4-202ENST00000441080 LYRM7Q5U5X0 104 aa0.8□□□□□ -2.28
PFDN4-202ENST00000441080 SLC30A7Q8NEW0 376 aa0.8□□□□□ -2.28
PFDN4-202ENST00000441080 OR2T35Q8NGX2 323 aa0.8□□□□□ -2.28
PFDN4-202ENST00000441080 NCOA1Q15788 1441 aa0.8□□□□□ -2.28
PFDN4-202ENST00000441080 TNRC6AQ8NDV7 1962 aaKnown RBP0.79□□□□□ -2.28
PFDN4-202ENST00000441080 MUC5BQ9HC84 5762 aaPredicted RBP0.79□□□□□ -2.28
PFDN4-202ENST00000441080 TMEM114B3SHH9 223 aa0.79□□□□□ -2.28
PFDN4-202ENST00000441080 CCL16O15467 120 aa0.79□□□□□ -2.28
PFDN4-202ENST00000441080 SRP14P37108 136 aaKnown RBP0.79□□□□□ -2.28
PFDN4-202ENST00000441080 SPA17Q15506 151 aa0.79□□□□□ -2.28
PFDN4-202ENST00000441080 SBSPONQ8IVN8 264 aa0.79□□□□□ -2.28
PFDN4-202ENST00000441080 TMEM254Q8TBM7 123 aa0.79□□□□□ -2.28
PFDN4-202ENST00000441080 SIGMAR1Q99720 223 aa0.79□□□□□ -2.28
PFDN4-202ENST00000441080 SLC22A13Q9Y226 551 aa0.79□□□□□ -2.28
PFDN4-202ENST00000441080 ZNF106Q9H2Y7 1883 aaKnown RBP0.79□□□□□ -2.28
PFDN4-202ENST00000441080 CEP192Q8TEP8 1941 aa0.79□□□□□ -2.28
PFDN4-202ENST00000441080 RNASE4P34096 147 aaKnown RBP0.78□□□□□ -2.28
PFDN4-202ENST00000441080 KRR1Q13601 381 aaKnown RBP0.78□□□□□ -2.28
PFDN4-202ENST00000441080 SPRNQ5BIV9 151 aa0.78□□□□□ -2.28
PFDN4-202ENST00000441080 Q8IYB0 196 aa0.78□□□□□ -2.28
PFDN4-202ENST00000441080 PATE1Q8WXA2 126 aa0.78□□□□□ -2.28
PFDN4-202ENST00000441080 GPER1Q99527 375 aa0.78□□□□□ -2.28
PFDN4-202ENST00000441080 KIFC1Q9BW19 673 aa0.78□□□□□ -2.28
PFDN4-202ENST00000441080 TCRBV4S1A1TA0A5B7 111 aa0.77□□□□□ -2.29
PFDN4-202ENST00000441080 OR7C1O76099 320 aaPredicted RBP0.77□□□□□ -2.29
PFDN4-202ENST00000441080 ERP29P30040 261 aaKnown RBP0.77□□□□□ -2.29
PFDN4-202ENST00000441080 CCL7P80098 99 aa0.77□□□□□ -2.29
PFDN4-202ENST00000441080 PSG9Q00887 426 aa0.77□□□□□ -2.29
PFDN4-202ENST00000441080 ST6GALNAC3Q8NDV1 305 aa0.77□□□□□ -2.29
PFDN4-202ENST00000441080 STAG3L4Q8TBR4 150 aa0.77□□□□□ -2.29
PFDN4-202ENST00000441080 GNPDA2Q8TDQ7 276 aa0.77□□□□□ -2.29
PFDN4-202ENST00000441080 BTF3L4Q96K17 158 aa0.77□□□□□ -2.29
PFDN4-202ENST00000441080 TMEM70Q9BUB7 260 aa0.77□□□□□ -2.29
PFDN4-202ENST00000441080 TMEM14CQ9P0S9 112 aa0.77□□□□□ -2.29
PFDN4-202ENST00000441080 CHCHD2Q9Y6H1 151 aaPredicted RBP0.77□□□□□ -2.29
PFDN4-202ENST00000441080 CCDC144AA2RUR9 1427 aa0.77□□□□□ -2.29
PFDN4-202ENST00000441080 SCN3AQ9NY46 2000 aa0.77□□□□□ -2.29
PFDN4-202ENST00000441080 SBF1O95248 1867 aa0.76□□□□□ -2.29
PFDN4-202ENST00000441080 LAMA4Q16363 1823 aa0.76□□□□□ -2.29
PFDN4-202ENST00000441080 TRGV10A0A0A0MS01 117 aa0.76□□□□□ -2.29
PFDN4-202ENST00000441080 TRBV6-4A0A1B0GX49 114 aa0.76□□□□□ -2.29
PFDN4-202ENST00000441080 TIMM17BO60830 172 aa0.76□□□□□ -2.29
PFDN4-202ENST00000441080 PIGPP57054 158 aa0.76□□□□□ -2.29
PFDN4-202ENST00000441080 GKN2Q86XP6 184 aa0.76□□□□□ -2.29
PFDN4-202ENST00000441080 PRAP1Q96NZ9 151 aa0.76□□□□□ -2.29
PFDN4-202ENST00000441080 UCK1Q9HA47 277 aa0.76□□□□□ -2.29
PFDN4-202ENST00000441080 NMNAT1Q9HAN9 279 aaPredicted RBP0.76□□□□□ -2.29
PFDN4-202ENST00000441080 PARVBQ9HBI1 364 aa0.76□□□□□ -2.29
PFDN4-202ENST00000441080 TAF1LQ8IZX4 1826 aa0.75□□□□□ -2.29
PFDN4-202ENST00000441080 RRN3P1Q2M238 152 aa0.75□□□□□ -2.29
PFDN4-202ENST00000441080 LINC00322Q6ZN03 302 aaPredicted RBP0.75□□□□□ -2.29
PFDN4-202ENST00000441080 KRTAP19-3Q7Z4W3 81 aa0.75□□□□□ -2.29
PFDN4-202ENST00000441080 PDZD9Q8IXQ8 264 aa0.75□□□□□ -2.29
PFDN4-202ENST00000441080 OR11H6Q8NGC7 330 aa0.75□□□□□ -2.29
PFDN4-202ENST00000441080 YPEL2Q96QA6 119 aa0.75□□□□□ -2.29
PFDN4-202ENST00000441080 LINC00467Q9BRT7 94 aa0.75□□□□□ -2.29
PFDN4-202ENST00000441080 TLNRD1Q9H1K6 362 aa0.75□□□□□ -2.29
PFDN4-202ENST00000441080 TAS2R7Q9NYW3 318 aa0.75□□□□□ -2.29
PFDN4-202ENST00000441080 EML5Q05BV3 1969 aa0.75□□□□□ -2.29
PFDN4-202ENST00000441080 PLXND1Q9Y4D7 1925 aa0.75□□□□□ -2.29
PFDN4-202ENST00000441080 RIMBP3CA6NJZ7 1639 aa0.75□□□□□ -2.29
PFDN4-202ENST00000441080 RIMBP3BA6NNM3 1639 aa0.75□□□□□ -2.29
PFDN4-202ENST00000441080 RIMBP3Q9UFD9 1639 aa0.75□□□□□ -2.29
PFDN4-202ENST00000441080 TRAV4A0A0B4J268 109 aa0.74□□□□□ -2.29
PFDN4-202ENST00000441080 SERPINB9P50453 376 aa0.74□□□□□ -2.29
PFDN4-202ENST00000441080 TMEM126AQ9H061 195 aa0.74□□□□□ -2.29
PFDN4-202ENST00000441080 DOCK3Q8IZD9 2030 aa0.74□□□□□ -2.29
PFDN4-202ENST00000441080 DENND4CQ5VZ89 1909 aa0.74□□□□□ -2.29
PFDN4-202ENST00000441080 IGHV1-58A0A0C4DH39 117 aa0.73□□□□□ -2.29
PFDN4-202ENST00000441080 A0A1W2PPM0 123 aa0.73□□□□□ -2.29
PFDN4-202ENST00000441080 A8MWV9 139 aa0.73□□□□□ -2.29
PFDN4-202ENST00000441080 NDUFB3O43676 98 aa0.73□□□□□ -2.29
PFDN4-202ENST00000441080 KLF7O75840 302 aaPredicted RBP0.73□□□□□ -2.29
PFDN4-202ENST00000441080 EFNA4P52798 201 aa0.73□□□□□ -2.29
PFDN4-202ENST00000441080 LIN52Q52LA3 116 aa0.73□□□□□ -2.29
PFDN4-202ENST00000441080 C22orf39Q6P5X5 142 aa0.73□□□□□ -2.29
PFDN4-202ENST00000441080 C2orf82Q6UX34 121 aa0.73□□□□□ -2.29
PFDN4-202ENST00000441080 TP53RKQ96S44 253 aa0.73□□□□□ -2.29
PFDN4-202ENST00000441080 ORMDL1Q9P0S3 153 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms