RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 UPK2O00526 184 aa10.95□□□□□ -0.66
PCNX3-202ENST00000439247 LEPROTL1O95214 131 aa10.95□□□□□ -0.66
PCNX3-202ENST00000439247 SAA1P0DJI8 122 aaPredicted RBP10.95□□□□□ -0.66
PCNX3-202ENST00000439247 NAA38Q9BRA0 125 aaKnown RBP10.95□□□□□ -0.66
PCNX3-202ENST00000439247 C7orf69Q9H7B7 122 aa10.95□□□□□ -0.66
PCNX3-202ENST00000439247 PTPRQQ9UMZ3 2332 aa10.95□□□□□ -0.66
PCNX3-202ENST00000439247 SRRM5B3KS81 715 aa10.95□□□□□ -0.66
PCNX3-202ENST00000439247 COX7A2P2O60397 106 aa10.95□□□□□ -0.66
PCNX3-202ENST00000439247 OR2J3O76001 311 aa10.95□□□□□ -0.66
PCNX3-202ENST00000439247 CT45A6P0DMU7 189 aa10.95□□□□□ -0.66
PCNX3-202ENST00000439247 CT45A5P0DMU8 189 aa10.95□□□□□ -0.66
PCNX3-202ENST00000439247 CT45A7P0DMV0 189 aa10.95□□□□□ -0.66
PCNX3-202ENST00000439247 REG1BP48304 166 aa10.95□□□□□ -0.66
PCNX3-202ENST00000439247 RHOGP84095 191 aa10.95□□□□□ -0.66
PCNX3-202ENST00000439247 CD69Q07108 199 aa10.95□□□□□ -0.66
PCNX3-202ENST00000439247 INO80CQ6PI98 192 aaPredicted RBP10.95□□□□□ -0.66
PCNX3-202ENST00000439247 FNDC4Q9H6D8 234 aaPredicted RBP10.95□□□□□ -0.66
PCNX3-202ENST00000439247 RP1L1Q8IWN7 2480 aaPredicted RBP10.94□□□□□ -0.66
PCNX3-202ENST00000439247 TACC2O95359 2948 aa10.94□□□□□ -0.66
PCNX3-202ENST00000439247 A0A1B0GXF2 115 aa10.94□□□□□ -0.66
PCNX3-202ENST00000439247 SAP30O75446 220 aa10.94□□□□□ -0.66
PCNX3-202ENST00000439247 TOX4O94842 621 aa10.94□□□□□ -0.66
PCNX3-202ENST00000439247 IGKV3-15P01624 115 aa10.94□□□□□ -0.66
PCNX3-202ENST00000439247 HOXC12P31275 282 aa10.94□□□□□ -0.66
PCNX3-202ENST00000439247 KIR2DS2P43631 304 aa10.94□□□□□ -0.66
PCNX3-202ENST00000439247 SLC25A34Q6PIV7 304 aa10.94□□□□□ -0.66
PCNX3-202ENST00000439247 NPIPB3Q92617 1050 aa10.94□□□□□ -0.66
PCNX3-202ENST00000439247 MSRB2Q9Y3D2 182 aa10.94□□□□□ -0.66
PCNX3-202ENST00000439247 PLCE1Q9P212 2302 aa10.94□□□□□ -0.66
PCNX3-202ENST00000439247 KLRC4-KLRK1H3BQV0 150 aa10.94□□□□□ -0.66
PCNX3-202ENST00000439247 SPRY3O43610 288 aa10.94□□□□□ -0.66
PCNX3-202ENST00000439247 DEFB125Q8N687 156 aa10.94□□□□□ -0.66
PCNX3-202ENST00000439247 MOSP00540 346 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 C10orf113Q5VZT2 155 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 FAM231DQ6ZW35 169 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 TEX45Q8NA69 505 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 SARAFQ96BY9 339 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 FXYD5Q96DB9 178 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 PRNDQ9UKY0 176 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 ZNF835Q9Y2P0 537 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 PPBPP02775 128 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 SLC25A5P05141 298 aaKnown RBP10.93□□□□□ -0.66
PCNX3-202ENST00000439247 APELAP0DMC3 54 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 CGB3P0DN86 165 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 CGB7P0DN87 165 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 IGHV3-21A0A0B4J1V1 117 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 ORM2P19652 201 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 RIPPLY3P57055 190 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 HBBP68871 147 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 RASL11AQ6T310 242 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 Q6ZT83 130 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 GSX1Q9H4S2 264 aaPredicted RBP10.93□□□□□ -0.66
PCNX3-202ENST00000439247 ST20Q9HBF5 79 aa10.93□□□□□ -0.66
PCNX3-202ENST00000439247 IGHV1-18A0A0C4DH31 117 aa10.92□□□□□ -0.66
PCNX3-202ENST00000439247 GAGE12BA1L429 117 aa10.92□□□□□ -0.66
PCNX3-202ENST00000439247 PGPA6NDG6 321 aa10.92□□□□□ -0.66
PCNX3-202ENST00000439247 HIST1H1EP10412 219 aaKnown RBP10.92□□□□□ -0.66
PCNX3-202ENST00000439247 UQCRFS1P47985 274 aa10.92□□□□□ -0.66
PCNX3-202ENST00000439247 C2orf83Q53S99 150 aa10.92□□□□□ -0.66
PCNX3-202ENST00000439247 SCRT2Q9NQ03 307 aa10.92□□□□□ -0.66
PCNX3-202ENST00000439247 RELNP78509 3460 aa10.92□□□□□ -0.66
PCNX3-202ENST00000439247 TRAV8-1A0A0A6YYK1 113 aa10.92□□□□□ -0.66
PCNX3-202ENST00000439247 KBTBD11-OT1A0A1B0GTJ5 212 aa10.92□□□□□ -0.66
PCNX3-202ENST00000439247 LINC00305Q7Z4B0 112 aa10.92□□□□□ -0.66
PCNX3-202ENST00000439247 SH3BGRL2Q9UJC5 107 aa10.92□□□□□ -0.66
PCNX3-202ENST00000439247 CR1LQ2VPA4 569 aa10.91□□□□□ -0.66
PCNX3-202ENST00000439247 C1orf122Q6ZSJ8 110 aa10.91□□□□□ -0.66
PCNX3-202ENST00000439247 ZNF257Q9Y2Q1 563 aa10.91□□□□□ -0.66
PCNX3-202ENST00000439247 RAI1Q7Z5J4 1906 aaPredicted RBP10.91□□□□□ -0.66
PCNX3-202ENST00000439247 CACNA1AO00555 2505 aa10.91□□□□□ -0.66
PCNX3-202ENST00000439247 FNDC10F2Z333 226 aa10.91□□□□□ -0.66
PCNX3-202ENST00000439247 PPIAL4DF5H284 164 aa10.91□□□□□ -0.66
PCNX3-202ENST00000439247 CRXO43186 299 aaPredicted RBP10.91□□□□□ -0.66
PCNX3-202ENST00000439247 CEACAM4O75871 244 aa10.91□□□□□ -0.66
PCNX3-202ENST00000439247 TMEM177Q53S58 311 aa10.91□□□□□ -0.66
PCNX3-202ENST00000439247 IGFL2Q6UWQ7 119 aa10.91□□□□□ -0.66
PCNX3-202ENST00000439247 FAM216BQ8N7L0 139 aa10.91□□□□□ -0.66
PCNX3-202ENST00000439247 ITLN1Q8WWA0 313 aa10.91□□□□□ -0.66
PCNX3-202ENST00000439247 IGKV1D-37A0A075B6S9 117 aa10.91□□□□□ -0.66
PCNX3-202ENST00000439247 FSTL3O95633 263 aa10.91□□□□□ -0.66
PCNX3-202ENST00000439247 NCR2O95944 276 aa10.91□□□□□ -0.66
PCNX3-202ENST00000439247 KIR2DL2P43627 348 aaPredicted RBP10.91□□□□□ -0.66
PCNX3-202ENST00000439247 WT1-ASQ06250 92 aa10.91□□□□□ -0.66
PCNX3-202ENST00000439247 CCL13Q99616 98 aa10.91□□□□□ -0.66
PCNX3-202ENST00000439247 RAXQ9Y2V3 346 aa10.91□□□□□ -0.66
PCNX3-202ENST00000439247 ADGRG4Q8IZF6 3080 aa10.9□□□□□ -0.66
PCNX3-202ENST00000439247 DIAPH2-AS1Q14236 149 aa10.9□□□□□ -0.66
PCNX3-202ENST00000439247 RTL8BQ17RB0 113 aa10.9□□□□□ -0.66
PCNX3-202ENST00000439247 C9orf106Q8NAJ2 232 aa10.9□□□□□ -0.66
PCNX3-202ENST00000439247 PPP1R35Q8TAP8 253 aa10.9□□□□□ -0.66
PCNX3-202ENST00000439247 MRPL32Q9BYC8 188 aaKnown RBP10.9□□□□□ -0.66
PCNX3-202ENST00000439247 EPDR1Q9UM22 224 aa10.9□□□□□ -0.66
PCNX3-202ENST00000439247 TMEM116Q8NCL8 245 aa10.9□□□□□ -0.66
PCNX3-202ENST00000439247 OR1B1Q8NGR6 318 aa10.9□□□□□ -0.66
PCNX3-202ENST00000439247 MRPL20Q9BYC9 149 aaKnown RBP10.9□□□□□ -0.66
PCNX3-202ENST00000439247 RPP21Q9H633 154 aaKnown RBP10.9□□□□□ -0.66
PCNX3-202ENST00000439247 HSBP1L1C9JCN9 74 aa10.89□□□□□ -0.67
PCNX3-202ENST00000439247 WFDC8Q8IUA0 241 aa10.89□□□□□ -0.67
PCNX3-202ENST00000439247 C19orf24Q9BVV8 132 aa10.89□□□□□ -0.67
PCNX3-202ENST00000439247 MEGF9Q9H1U4 602 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms