RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 PTPRSQ13332 1948 aa10.31□□□□□ -0.76
CPNE4-201ENST00000429747 LINC00614P0C842 121 aa10.31□□□□□ -0.76
CPNE4-201ENST00000429747 CD24P25063 80 aa10.31□□□□□ -0.76
CPNE4-201ENST00000429747 GAFA1Q96PS6 74 aa10.31□□□□□ -0.76
CPNE4-201ENST00000429747 IGHV3OR16-13A0A075B7E8 117 aa10.3□□□□□ -0.76
CPNE4-201ENST00000429747 IGHV3-74A0A0B4J1X5 117 aa10.3□□□□□ -0.76
CPNE4-201ENST00000429747 FAM181BA6NEQ2 426 aa10.3□□□□□ -0.76
CPNE4-201ENST00000429747 K7EN84 100 aa10.3□□□□□ -0.76
CPNE4-201ENST00000429747 IGHV3-23P01764 117 aa10.3□□□□□ -0.76
CPNE4-201ENST00000429747 TEX45Q8NA69 505 aa10.3□□□□□ -0.76
CPNE4-201ENST00000429747 C18orf15Q96N68 181 aa10.3□□□□□ -0.76
CPNE4-201ENST00000429747 MCRIP2Q9BUT9 160 aaKnown RBP10.3□□□□□ -0.76
CPNE4-201ENST00000429747 TRBV20OR9-2A0A075B6H5 130 aa10.3□□□□□ -0.76
CPNE4-201ENST00000429747 IGHG3P01860 377 aa10.3□□□□□ -0.76
CPNE4-201ENST00000429747 ZNF474Q6S9Z5 364 aaPredicted RBP10.3□□□□□ -0.76
CPNE4-201ENST00000429747 C5orf30Q96GV9 206 aa10.3□□□□□ -0.76
CPNE4-201ENST00000429747 J3QR89 54 aa10.3□□□□□ -0.76
CPNE4-201ENST00000429747 MMP23AO75900 390 aa10.3□□□□□ -0.76
CPNE4-201ENST00000429747 NPSP0C0P6 89 aa10.3□□□□□ -0.76
CPNE4-201ENST00000429747 MFAP4P55083 255 aa10.3□□□□□ -0.76
CPNE4-201ENST00000429747 RELQ04864 619 aaPredicted RBP10.3□□□□□ -0.76
CPNE4-201ENST00000429747 TMEM200BQ69YZ2 307 aa10.3□□□□□ -0.76
CPNE4-201ENST00000429747 ZNF841Q6ZN19 808 aa10.3□□□□□ -0.76
CPNE4-201ENST00000429747 RANBP2P49792 3224 aaKnown RBP10.3□□□□□ -0.76
CPNE4-201ENST00000429747 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.3□□□□□ -0.76
CPNE4-201ENST00000429747 NOTCH3Q9UM47 2321 aa10.3□□□□□ -0.76
CPNE4-201ENST00000429747 PMS2P5A8MQ11 134 aa10.29□□□□□ -0.76
CPNE4-201ENST00000429747 ZNF138P52744 262 aa10.29□□□□□ -0.76
CPNE4-201ENST00000429747 SLC25A48Q6ZT89 311 aaKnown RBP10.29□□□□□ -0.76
CPNE4-201ENST00000429747 EXOC3-AS1Q8N2X6 119 aa10.29□□□□□ -0.76
CPNE4-201ENST00000429747 YPEL4Q96NS1 127 aa10.29□□□□□ -0.76
CPNE4-201ENST00000429747 ZGRF1Q86YA3 2104 aa10.29□□□□□ -0.76
CPNE4-201ENST00000429747 H0YJW9 148 aa10.29□□□□□ -0.76
CPNE4-201ENST00000429747 GCSHP23434 173 aa10.29□□□□□ -0.76
CPNE4-201ENST00000429747 TDRG1Q3Y452 100 aa10.29□□□□□ -0.76
CPNE4-201ENST00000429747 CIARTQ8N365 385 aaPredicted RBP10.29□□□□□ -0.76
CPNE4-201ENST00000429747 NUP210LQ5VU65 1888 aa10.29□□□□□ -0.76
CPNE4-201ENST00000429747 PPP1R27Q86WC6 154 aa10.29□□□□□ -0.76
CPNE4-201ENST00000429747 RPRMLQ8N4K4 120 aa10.29□□□□□ -0.76
CPNE4-201ENST00000429747 ALKBH7Q9BT30 221 aaPredicted RBP10.29□□□□□ -0.76
CPNE4-201ENST00000429747 CDX4O14627 284 aaPredicted RBP10.29□□□□□ -0.76
CPNE4-201ENST00000429747 VWC2Q2TAL6 325 aa10.29□□□□□ -0.76
CPNE4-201ENST00000429747 ZNF788Q6ZQV5 615 aa10.29□□□□□ -0.76
CPNE4-201ENST00000429747 LINC01560Q8TB33 94 aa10.29□□□□□ -0.76
CPNE4-201ENST00000429747 NEUROG1Q92886 237 aa10.29□□□□□ -0.76
CPNE4-201ENST00000429747 SOX21Q9Y651 276 aaPredicted RBP10.29□□□□□ -0.76
CPNE4-201ENST00000429747 hDV102S1A0JD36 115 aa10.28□□□□□ -0.76
CPNE4-201ENST00000429747 BMI1P35226 326 aa10.28□□□□□ -0.76
CPNE4-201ENST00000429747 C17orf58Q2M2W7 97 aa10.28□□□□□ -0.76
CPNE4-201ENST00000429747 C18orf32Q8TCD1 76 aa10.28□□□□□ -0.76
CPNE4-201ENST00000429747 PRELID3AQ96N28 172 aa10.28□□□□□ -0.76
CPNE4-201ENST00000429747 SELENOKQ9Y6D0 94 aa10.28□□□□□ -0.76
CPNE4-201ENST00000429747 SH2D7A6NKC9 451 aaPredicted RBP10.28□□□□□ -0.76
CPNE4-201ENST00000429747 C10orf142B7Z368 130 aa10.28□□□□□ -0.76
CPNE4-201ENST00000429747 SLAQ13239 276 aa10.28□□□□□ -0.76
CPNE4-201ENST00000429747 SPANXN1Q5VSR9 72 aa10.28□□□□□ -0.76
CPNE4-201ENST00000429747 RCHY1Q96PM5 261 aa10.28□□□□□ -0.76
CPNE4-201ENST00000429747 TMEM133Q9H2Q1 129 aa10.28□□□□□ -0.76
CPNE4-201ENST00000429747 C1RLQ9NZP8 487 aa10.28□□□□□ -0.76
CPNE4-201ENST00000429747 GOSR1O95249 250 aa10.28□□□□□ -0.76
CPNE4-201ENST00000429747 WNT2P09544 360 aa10.28□□□□□ -0.76
CPNE4-201ENST00000429747 TM4SF20Q53R12 229 aa10.28□□□□□ -0.76
CPNE4-201ENST00000429747 TMEM167AQ8TBQ9 72 aa10.28□□□□□ -0.76
CPNE4-201ENST00000429747 RPL7P18124 248 aaKnown RBP10.27□□□□□ -0.76
CPNE4-201ENST00000429747 TSPOP30536 169 aa10.27□□□□□ -0.76
CPNE4-201ENST00000429747 FAM57AQ8TBR7 257 aa10.27□□□□□ -0.76
CPNE4-201ENST00000429747 ASCL2Q99929 193 aa10.27□□□□□ -0.76
CPNE4-201ENST00000429747 COL25A1Q9BXS0 654 aaPredicted RBP10.27□□□□□ -0.76
CPNE4-201ENST00000429747 OTORQ9NRC9 128 aa10.27□□□□□ -0.76
CPNE4-201ENST00000429747 SRRM4A7MD48 611 aaKnown RBP10.27□□□□□ -0.77
CPNE4-201ENST00000429747 FBLN7Q53RD9 439 aa10.27□□□□□ -0.77
CPNE4-201ENST00000429747 ZNF414Q96IQ9 312 aa10.27□□□□□ -0.77
CPNE4-201ENST00000429747 OR2T8A6NH00 312 aa10.27□□□□□ -0.77
CPNE4-201ENST00000429747 PSG1P11464 419 aa10.27□□□□□ -0.77
CPNE4-201ENST00000429747 LOXL3P58215 753 aa10.27□□□□□ -0.77
CPNE4-201ENST00000429747 C11orf52Q96A22 123 aa10.27□□□□□ -0.77
CPNE4-201ENST00000429747 ARFGEF3Q5TH69 2177 aa10.27□□□□□ -0.77
CPNE4-201ENST00000429747 IGHV3-49A0A0A0MS15 119 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 TCRAP04437 139 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 SMIM17P0DL12 118 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 CCDC144NLQ6NUI1 221 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 MYOZ3Q8TDC0 251 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 CCL21O00585 134 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 FRMD6-AS1P0C7T7 363 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 PDLIM4P50479 330 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 PRR20EP86478 221 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 PRR20CP86479 221 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 PRR20DP86480 221 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 PRR20BP86481 221 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 PRR20AP86496 221 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 MPV17L2Q567V2 206 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 ATP5L2Q7Z4Y8 100 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 ZNF329Q86UD4 541 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 F5H697 171 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 MAP1LC3AQ9H492 121 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 C7orf71A4D174 169 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 FNDC10F2Z333 226 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 MRPL27Q9P0M9 148 aaKnown RBP10.26□□□□□ -0.77
CPNE4-201ENST00000429747 PSG8Q9UQ74 426 aa10.26□□□□□ -0.77
CPNE4-201ENST00000429747 IGLC2P0DOY2 106 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms