RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 SRYQ05066 204 aa7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 RSPO1Q2MKA7 263 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 RHBDD2Q6NTF9 364 aa7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 C6orf15Q6UXA7 325 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 ABHD12Q8N2K0 398 aa7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 HLA-DRB4X5D2U9 266 aa7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 M0R135 149 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 FAM106CPP0CH98 169 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 FAM106AQ4KMX7 169 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 CT83Q5H943 113 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 OR10J6PQ8NGY7 276 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 ZNF799Q96GE5 643 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 KIR2DL4Q99706 377 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 PRTFDC1Q9NRG1 225 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 LSM4Q9Y4Z0 139 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 GGTLC3B5MD39 225 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 H0YIG0 161 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 C16orf97H3BN30 126 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 NDUFS7O75251 213 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 PPP1R27Q86WC6 154 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 ABCA7Q8IZY2 2146 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 ZDHHC16Q969W1 377 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 COQ2Q96H96 371 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 FBXL15Q9H469 300 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 UBTD1Q9HAC8 227 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 SPANXCQ9NY87 97 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 TCF19Q9Y242 345 aa7.2□□□□□ -1.26
CDC42BPA-206ENST00000429440 A0A1B0GX51 115 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 A0A1W2PPI3 338 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 B4GALT1P15291 398 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 COL8A1P27658 744 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 KIR2DS2P43631 304 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 ZNF138P52744 262 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 GFERP55789 205 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 RBPMS2Q6ZRY4 209 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 SBSPONQ8IVN8 264 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 SPTSSAQ969W0 71 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 AJUBAQ96IF1 538 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 RASL11BQ9BPW5 248 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 VPS13AQ96RL7 3174 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 DMDP11532 3685 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 COL5A1P20908 1838 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 TRBV25-1A0A075B6N4 114 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 IGHV5-51A0A0C4DH38 117 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 A0A1W2PR77 199 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 PRRG2O14669 202 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 APOHP02749 345 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 CFIP05156 583 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 GLRXP35754 106 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 MFAP4P55083 255 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 RPS16P62249 146 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 C17orf82Q86X59 251 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 FAM169BQ8N8A8 192 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 PIGCQ92535 297 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 RND1Q92730 232 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 RITA1Q96K30 269 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 LINC01587Q99440 93 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 NUDT22Q9BRQ3 303 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 GFRA4Q9GZZ7 299 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 FAM234AQ9H0X4 552 aa7.19□□□□□ -1.26
CDC42BPA-206ENST00000429440 IGHV1OR15-9A0A0B4J2B8 117 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 F8WDY8 70 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 CACNG7P62955 275 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 ONECUT1Q9UBC0 465 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 KLF12Q9Y4X4 402 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 RTTNQ86VV8 2226 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 PRSS46E5RG02 174 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 J3KT08 172 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 CHEK1O14757 476 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 KLK10O43240 276 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 LTAP01374 205 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 SUMO3P55854 103 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 FGF12P61328 243 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 RPS28P62857 69 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 DEFB119Q8N690 84 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 WDR31Q8NA23 367 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 OR8A1Q8NGG7 326 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 OR13C6PQ8NH95 151 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 TMEM158Q8WZ71 300 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 ZNF414Q96IQ9 312 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 C7orf69Q9H7B7 122 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 PLEKHA3Q9HB20 300 aa7.18□□□□□ -1.26
CDC42BPA-206ENST00000429440 FRYLO94915 3013 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 CEP192Q8TEP8 1941 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 WDR87Q6ZQQ6 2873 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 TRAV4A0A0B4J268 109 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 C5orf49A4QMS7 147 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 MT-CO3P00414 261 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 SPRNQ5BIV9 151 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 H2BFWTQ7Z2G1 175 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 DRAM1Q8N682 238 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 C1orf162Q8NEQ5 155 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 MMABQ96EY8 250 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 KLRF1Q9NZS2 232 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 SDK1Q7Z5N4 2213 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 UNC13CQ8NB66 2214 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 CABIN1Q9Y6J0 2220 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 A0A096LNJ9 63 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 LILRA5A6NI73 299 aa7.17□□□□□ -1.26
CDC42BPA-206ENST00000429440 LINC01619G3V211 115 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms