RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 SAA1P0DJI8 122 aaPredicted RBP6.84□□□□□ -1.31
SH3D19-204ENST00000427414 SLC35B1P78383 322 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 ODF1Q14990 250 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 RNF151Q2KHN1 245 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 PNKDQ8N490 385 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 SLC24A4Q8NFF2 622 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 KCNS1Q96KK3 526 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 RCHY1Q96PM5 261 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 ALKBH7Q9BT30 221 aaPredicted RBP6.84□□□□□ -1.31
SH3D19-204ENST00000427414 C19orf24Q9BVV8 132 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 COMMD5Q9GZQ3 224 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 YTHDF2Q9Y5A9 579 aaKnown RBP6.84□□□□□ -1.31
SH3D19-204ENST00000427414 CEP295Q9C0D2 2601 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 PLCE1Q9P212 2302 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 DIDO1Q9BTC0 2240 aaKnown RBP6.84□□□□□ -1.31
SH3D19-204ENST00000427414 ASPMQ8IZT6 3477 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 DMXL2Q8TDJ6 3036 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 TRBV9A0A0B4J1U6 114 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 NTF3P20783 257 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 NPY1RP25929 384 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 CDKN1BP46527 198 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 RPL19P84098 196 aaKnown RBP6.84□□□□□ -1.31
SH3D19-204ENST00000427414 KLK9Q2XQG4 91 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 UTF1Q5T230 341 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 MIC13Q5XKP0 118 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 PRSS57Q6UWY2 283 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 FAM19A2Q8N3H0 131 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 UHRF2Q96PU4 802 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 NPVFQ9HCQ7 196 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 HEYLQ9NQ87 328 aaPredicted RBP6.84□□□□□ -1.31
SH3D19-204ENST00000427414 ONECUT1Q9UBC0 465 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 KLK9Q9UKQ9 250 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 COX11Q9Y6N1 276 aa6.84□□□□□ -1.31
SH3D19-204ENST00000427414 ZNF324O75467 553 aaPredicted RBP6.83□□□□□ -1.32
SH3D19-204ENST00000427414 IGKV1-16P04430 117 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 TSPOP30536 169 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 OR10J3Q5JRS4 329 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 CFHR4Q92496 578 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 BORCS7Q96B45 105 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 EAF1Q96JC9 268 aaPredicted RBP6.83□□□□□ -1.32
SH3D19-204ENST00000427414 SPTBN2O15020 2390 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 IGF2RP11717 2491 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 COL6A6A6NMZ7 2263 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 SRRM4A7MD48 611 aaKnown RBP6.83□□□□□ -1.32
SH3D19-204ENST00000427414 K7EP13 123 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 MT-ND6P03923 174 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 SRIP30626 198 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 OPRK1P41145 380 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 LINC00205P59089 165 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 RAB31Q13636 194 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 WDR73Q6P4I2 378 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 TREML4Q6UXN2 200 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 OR4C5Q8NGB2 326 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 V9GYV3 84 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 CFAP47Q6ZTR5 3102 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 J3QLI3 93 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 TOMM40O96008 361 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 MOSP00540 346 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 HOXB4P17483 251 aaPredicted RBP6.83□□□□□ -1.32
SH3D19-204ENST00000427414 TCL1AP56279 114 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 SRSF1Q07955 248 aaKnown RBP eCLIP6.83□□□□□ -1.32
SH3D19-204ENST00000427414 PSG5Q15238 335 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 VMO1Q7Z5L0 202 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 Q8N6K4 173 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 SSMEM1Q8WWF3 244 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 BPESC1Q9GZL8 116 aa6.83□□□□□ -1.32
SH3D19-204ENST00000427414 LSM4Q9Y4Z0 139 aaKnown RBP6.83□□□□□ -1.32
SH3D19-204ENST00000427414 TOX4O94842 621 aa6.82□□□□□ -1.32
SH3D19-204ENST00000427414 GCHFRP30047 84 aa6.82□□□□□ -1.32
SH3D19-204ENST00000427414 NIT1Q86X76 327 aa6.82□□□□□ -1.32
SH3D19-204ENST00000427414 MGST2Q99735 147 aa6.82□□□□□ -1.32
SH3D19-204ENST00000427414 C1RLQ9NZP8 487 aa6.82□□□□□ -1.32
SH3D19-204ENST00000427414 SIGLEC9Q9Y336 463 aa6.82□□□□□ -1.32
SH3D19-204ENST00000427414 MRPS16Q9Y3D3 137 aaKnown RBP6.82□□□□□ -1.32
SH3D19-204ENST00000427414 C9JCJ5 164 aa6.82□□□□□ -1.32
SH3D19-204ENST00000427414 MT-CO2P00403 227 aa6.82□□□□□ -1.32
SH3D19-204ENST00000427414 CA2P00918 260 aa6.82□□□□□ -1.32
SH3D19-204ENST00000427414 ZFP36P26651 326 aaKnown RBP6.82□□□□□ -1.32
SH3D19-204ENST00000427414 GNG4P50150 75 aa6.82□□□□□ -1.32
SH3D19-204ENST00000427414 CX3CL1P78423 397 aa6.82□□□□□ -1.32
SH3D19-204ENST00000427414 FXYD3Q14802 87 aa6.82□□□□□ -1.32
SH3D19-204ENST00000427414 FBLN7Q53RD9 439 aa6.82□□□□□ -1.32
SH3D19-204ENST00000427414 LCN12Q6JVE5 192 aa6.82□□□□□ -1.32
SH3D19-204ENST00000427414 MRPL54Q6P161 138 aaKnown RBP6.82□□□□□ -1.32
SH3D19-204ENST00000427414 TMEM136Q6ZRR5 245 aa6.82□□□□□ -1.32
SH3D19-204ENST00000427414 GGTLC1Q9BX51 225 aa6.82□□□□□ -1.32
SH3D19-204ENST00000427414 RNASE7Q9H1E1 156 aaKnown RBP6.82□□□□□ -1.32
SH3D19-204ENST00000427414 SEPSECSQ9HD40 501 aaKnown RBP6.82□□□□□ -1.32
SH3D19-204ENST00000427414 TRAV3A0A0B4J244 114 aa6.81□□□□□ -1.32
SH3D19-204ENST00000427414 HELTA6NFD8 242 aa6.81□□□□□ -1.32
SH3D19-204ENST00000427414 RNASE2P10153 161 aaKnown RBP6.81□□□□□ -1.32
SH3D19-204ENST00000427414 ATP5J2P56134 94 aa6.81□□□□□ -1.32
SH3D19-204ENST00000427414 ARF6P62330 175 aa6.81□□□□□ -1.32
SH3D19-204ENST00000427414 MRGPRG-AS1Q2M3A8 158 aa6.81□□□□□ -1.32
SH3D19-204ENST00000427414 SPATA31B1PQ5VZV4 182 aa6.81□□□□□ -1.32
SH3D19-204ENST00000427414 PQLC2Q6ZP29 291 aa6.81□□□□□ -1.32
SH3D19-204ENST00000427414 C19orf35Q6ZS72 473 aa6.81□□□□□ -1.32
SH3D19-204ENST00000427414 PPP1R27Q86WC6 154 aa6.81□□□□□ -1.32
SH3D19-204ENST00000427414 OR2D3Q8NGH3 330 aa6.81□□□□□ -1.32
SH3D19-204ENST00000427414 TSKUQ8WUA8 353 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms