RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 WFDC5Q8TCV5 224 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 DPH3Q96FX2 82 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 ZNF714Q96N38 554 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 HIST1H2BLQ99880 126 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 VGLL1Q99990 258 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 NAA38Q9BRA0 125 aaKnown RBP2.53□□□□□ -2
SF3B1-205ENST00000424674 NPCDR1Q9BY65 106 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 PLA2G12AQ9BZM1 189 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 C11orf1Q9H5F2 150 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 SAR1AQ9NR31 198 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 TXNL4BQ9NX01 149 aaKnown RBP2.53□□□□□ -2
SF3B1-205ENST00000424674 RALGAPA2Q2PPJ7 1873 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 NUP210Q8TEM1 1887 aaPredicted RBP2.53□□□□□ -2
SF3B1-205ENST00000424674 PHLPP1O60346 1717 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 ZFYVE16Q7Z3T8 1539 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 TRIP11Q15643 1979 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 PZPP20742 1482 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 MYOM2P54296 1465 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 UBR2Q8IWV8 1755 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 IGKV1-9A0A0C4DH69 117 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 A0A0D9SG52 128 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 IGHV3-64DA0A0J9YX35 117 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 C17orf51A8MQB3 221 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 H7C423 109 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 SLC25A20O43772 301 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 SH2D1AO60880 128 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 CD14P08571 375 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 TLX1NBP0CAT3 122 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 CD28P10747 220 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 TGFBR1P36897 503 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 S100A10P60903 97 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 C10orf91Q5T1B1 145 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 ZNF322Q6U7Q0 402 aaPredicted RBP2.52□□□□□ -2.01
SF3B1-205ENST00000424674 ZNF705AQ6ZN79 300 aaPredicted RBP2.52□□□□□ -2.01
SF3B1-205ENST00000424674 TMEM91Q6ZNR0 172 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 BPIFA4PQ86YQ2 179 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 CEND1Q8N111 149 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 Q8N976 141 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 MORN4Q8NDC4 146 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 PLPP5Q8NEB5 264 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 OR4B1Q8NGF8 309 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 SCGB3A1Q96QR1 104 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 GINS4Q9BRT9 223 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 NAA60Q9H7X0 242 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 EPDR1Q9UM22 224 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 LINC00588Q9Y4M8 146 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 RAI1Q7Z5J4 1906 aaPredicted RBP2.52□□□□□ -2.01
SF3B1-205ENST00000424674 LOXHD1Q8IVV2 1947 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 MAPKBP1O60336 1514 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 FOCADQ5VW36 1801 aa2.52□□□□□ -2.01
SF3B1-205ENST00000424674 TROQ12816 1431 aaPredicted RBP2.51□□□□□ -2.01
SF3B1-205ENST00000424674 TRBV24-1A0A075B6N3 115 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 TRAV12-2A0A075B6T6 113 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 KLF18A0A0U1RQI7 1052 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 A6NDX4 124 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 OR51F1A6NGY5 319 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 KRTAP9-6A8MVA2 160 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 CCDC179H3BU77 68 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 YPEL1O60688 119 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 MPC2O95563 127 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 TCL1BO95988 128 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 IGHV1-69P01742 117 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 IGHV3-7P01780 117 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 SLC25A5P05141 298 aaKnown RBP2.51□□□□□ -2.01
SF3B1-205ENST00000424674 CGB3P0DN86 165 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 CGB7P0DN87 165 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 CCL3P10147 92 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 HLA-DMBP28068 263 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 RNASE4P34096 147 aaKnown RBP2.51□□□□□ -2.01
SF3B1-205ENST00000424674 SYCNQ0VAF6 134 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 UBE2SQ16763 222 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 C16orf47Q6ZP98 133 aaPredicted RBP2.51□□□□□ -2.01
SF3B1-205ENST00000424674 AAED1Q7RTV5 226 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 SAXO1Q8IYX7 474 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 C10orf111Q8N326 155 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 TTC9CQ8N5M4 171 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 LINC00311Q8N616 119 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 Q8N9W7 124 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 C5orf17Q8NAS9 161 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 BPIFB6Q8NFQ5 453 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 LINC01560Q8TB33 94 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 CIRBP-AS1Q8TBR5 109 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 GFRA4Q9GZZ7 299 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 COMMD3Q9UBI1 195 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 TRAPPC1Q9Y5R8 145 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 A2ML1A8K2U0 1454 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 MED14O60244 1454 aa2.51□□□□□ -2.01
SF3B1-205ENST00000424674 CDK5RAP2Q96SN8 1893 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 TRBV20-1A0A075B6N2 111 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.5□□□□□ -2.01
SF3B1-205ENST00000424674 A6NED7 52 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 KLF7O75840 302 aaPredicted RBP2.5□□□□□ -2.01
SF3B1-205ENST00000424674 NPYP01303 97 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 HBDP02042 147 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 PMP2P02689 132 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 MT-ND6P03923 174 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 GIG44P09565 113 aaPredicted RBP2.5□□□□□ -2.01
SF3B1-205ENST00000424674 SPINK8P0C7L1 97 aa2.5□□□□□ -2.01
SF3B1-205ENST00000424674 MRPS36P82909 103 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms