RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 C1orf174Q8IYL3 243 aa2□□□□□ -2.09
VPS41-206ENST00000418457 PRSS58Q8IYP2 241 aa2□□□□□ -2.09
VPS41-206ENST00000418457 GCNT2Q8N0V5 402 aa2□□□□□ -2.09
VPS41-206ENST00000418457 FAM58AQ8N1B3 248 aa2□□□□□ -2.09
VPS41-206ENST00000418457 TMEM256Q8N2U0 113 aa2□□□□□ -2.09
VPS41-206ENST00000418457 ZIC4Q8N9L1 334 aa2□□□□□ -2.09
VPS41-206ENST00000418457 OR10G3Q8NGC4 313 aa2□□□□□ -2.09
VPS41-206ENST00000418457 OR52E5Q8NH55 327 aa2□□□□□ -2.09
VPS41-206ENST00000418457 SGMS2Q8NHU3 365 aa2□□□□□ -2.09
VPS41-206ENST00000418457 BADQ92934 168 aa2□□□□□ -2.09
VPS41-206ENST00000418457 BORCS7Q96B45 105 aa2□□□□□ -2.09
VPS41-206ENST00000418457 STARD4Q96DR4 205 aa2□□□□□ -2.09
VPS41-206ENST00000418457 KCNS1Q96KK3 526 aa2□□□□□ -2.09
VPS41-206ENST00000418457 HSD17B10Q99714 261 aaKnown RBP2□□□□□ -2.09
VPS41-206ENST00000418457 HSPB9Q9BQS6 159 aa2□□□□□ -2.09
VPS41-206ENST00000418457 CHRDL1Q9BU40 450 aa2□□□□□ -2.09
VPS41-206ENST00000418457 C19orf24Q9BVV8 132 aa2□□□□□ -2.09
VPS41-206ENST00000418457 RTL8AQ9BWD3 113 aa2□□□□□ -2.09
VPS41-206ENST00000418457 SFXN3Q9BWM7 321 aa2□□□□□ -2.09
VPS41-206ENST00000418457 SH2D2AQ9NP31 389 aa2□□□□□ -2.09
VPS41-206ENST00000418457 NRN1Q9NPD7 142 aa2□□□□□ -2.09
VPS41-206ENST00000418457 OSTCQ9NRP0 149 aa2□□□□□ -2.09
VPS41-206ENST00000418457 TMEM167BQ9NRX6 74 aa2□□□□□ -2.09
VPS41-206ENST00000418457 BET1LQ9NYM9 111 aa2□□□□□ -2.09
VPS41-206ENST00000418457 MRPL27Q9P0M9 148 aaKnown RBP2□□□□□ -2.09
VPS41-206ENST00000418457 POLDIP2Q9Y2S7 368 aa2□□□□□ -2.09
VPS41-206ENST00000418457 TBL2Q9Y4P3 447 aaKnown RBP2□□□□□ -2.09
VPS41-206ENST00000418457 RBM7Q9Y580 266 aaKnown RBP2□□□□□ -2.09
VPS41-206ENST00000418457 RFNGQ9Y644 331 aa2□□□□□ -2.09
VPS41-206ENST00000418457 C5orf42Q9H799 3197 aa2□□□□□ -2.09
VPS41-206ENST00000418457 SHANK1Q9Y566 2161 aa2□□□□□ -2.09
VPS41-206ENST00000418457 ARID1AO14497 2285 aa2□□□□□ -2.09
VPS41-206ENST00000418457 EML6Q6ZMW3 1958 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 KIAA2026Q5HYC2 2103 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 TRAV30A0A087WSZ9 112 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 IGHV2-26A0A0B4J1V2 119 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 IGHV2OR16-5A0A0B4J2B6 119 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 IGHV1OR15-9A0A0B4J2B8 117 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 IGHV2-70DA0A0C4DH43 119 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 IGHV1-69-2A0A0G2JMI3 117 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 A0A0J9YW62 118 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 TMEM30CPA0ZSE6 113 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 ODAMA1E959 279 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 DPRXA6NFQ7 191 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 ZNF716A6NP11 495 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 H0Y8G0 127 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 K7ERU9 68 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 ISLRO14498 428 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 RBFOX2O43251 390 aaKnown RBP eCLIP1.99□□□□□ -2.09
VPS41-206ENST00000418457 SS18L1O75177 396 aaPredicted RBP1.99□□□□□ -2.09
VPS41-206ENST00000418457 MRPL33O75394 65 aaKnown RBP1.99□□□□□ -2.09
VPS41-206ENST00000418457 ZNF324O75467 553 aaPredicted RBP1.99□□□□□ -2.09
VPS41-206ENST00000418457 SCRG1O75711 98 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 SERF1AO75920 110 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 IGKV3-15P01624 115 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 P04436 131 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 CA3P07451 260 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 LINC00869P0C866 280 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 PMCHP20382 165 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 NPPCP23582 126 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 NPY1RP25929 384 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 TSPOP30536 169 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 SAA4P35542 130 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 KIR2DS2P43631 304 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 GABRA2P47869 451 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 GNG4P50150 75 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 GPM6AP51674 278 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 TAS2R45P59539 299 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 KRTDAPP60985 99 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 ARF6P62330 175 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 RBX1P62877 108 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 TFF3Q07654 80 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 GABRA6Q16445 453 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 BATFQ16520 125 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 CEACAM16Q2WEN9 425 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 DEFB133Q30KQ1 61 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 TIGITQ495A1 244 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 LRRC10Q5BKY1 277 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 DMRTC1Q5HYR2 192 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 STUMQ69YW2 141 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 C12orf54Q6X4T0 127 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 Q6ZN92 141 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 C16orf47Q6ZP98 133 aaPredicted RBP1.99□□□□□ -2.09
VPS41-206ENST00000418457 H2BFWTQ7Z2G1 175 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 ATP5L2Q7Z4Y8 100 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 YRDCQ86U90 279 aaKnown RBP1.99□□□□□ -2.09
VPS41-206ENST00000418457 BATF2Q8N1L9 274 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 C17orf78Q8N4C9 275 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 DRAM1Q8N682 238 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 CD177Q8N6Q3 437 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 TSTD1Q8NFU3 115 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 OR5T1Q8NG75 326 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 OR4C5Q8NGB2 326 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 OR4P4Q8NGL7 312 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 OR1L6Q8NGR2 347 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 VN1R17PQ8TDU5 208 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 IL1F10Q8WWZ1 152 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 RDH5Q92781 318 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 GALMQ96C23 342 aa1.99□□□□□ -2.09
VPS41-206ENST00000418457 SMIM12Q96EX1 92 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms