RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 CTRLP40313 264 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 RBM11P57052 281 aaKnown RBP7.62□□□□□ -1.19
SNHG3-201ENST00000413987 ARL16Q0P5N6 197 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 SPATA45Q537H7 98 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 FOXL2NBQ6ZUU3 175 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 BAGE3Q86Y29 109 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 BAGE2Q86Y30 109 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 VKORC1L1Q8N0U8 176 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 TCTEX1D1Q8N7M0 179 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 STPG4Q8N801 248 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 ZNF709Q8N972 641 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 OR4F17Q8NGA8 305 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 OR10G7Q8NGN6 311 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 SGMS2Q8NHU3 365 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 RCHY1Q96PM5 261 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 TXNDC17Q9BRA2 123 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 ZNF581Q9P0T4 197 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 MRPS16Q9Y3D3 137 aaKnown RBP7.62□□□□□ -1.19
SNHG3-201ENST00000413987 COX11Q9Y6N1 276 aa7.62□□□□□ -1.19
SNHG3-201ENST00000413987 SHANK1Q9Y566 2161 aa7.61□□□□□ -1.19
SNHG3-201ENST00000413987 ARID1AO14497 2285 aa7.61□□□□□ -1.19
SNHG3-201ENST00000413987 IGKV1-27A0A075B6S5 117 aa7.61□□□□□ -1.19
SNHG3-201ENST00000413987 SS18L1O75177 396 aaPredicted RBP7.61□□□□□ -1.19
SNHG3-201ENST00000413987 SERF1AO75920 110 aa7.61□□□□□ -1.19
SNHG3-201ENST00000413987 REG1AP05451 166 aa7.61□□□□□ -1.19
SNHG3-201ENST00000413987 ZNF32P17041 273 aa7.61□□□□□ -1.19
SNHG3-201ENST00000413987 RHOBP62745 196 aa7.61□□□□□ -1.19
SNHG3-201ENST00000413987 TMEM78Q5T7P6 136 aa7.61□□□□□ -1.19
SNHG3-201ENST00000413987 Q6ZN92 141 aa7.61□□□□□ -1.19
SNHG3-201ENST00000413987 FOXC2Q99958 501 aa7.61□□□□□ -1.19
SNHG3-201ENST00000413987 CCL28Q9NRJ3 127 aa7.61□□□□□ -1.19
SNHG3-201ENST00000413987 PLA2G2DQ9UNK4 145 aa7.61□□□□□ -1.19
SNHG3-201ENST00000413987 POLEQ07864 2286 aa7.61□□□□□ -1.19
SNHG3-201ENST00000413987 DCHS2Q6V1P9 2916 aa7.61□□□□□ -1.19
SNHG3-201ENST00000413987 MYO7BQ6PIF6 2116 aa7.61□□□□□ -1.19
SNHG3-201ENST00000413987 C11orf94C9JXX5 98 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 DEGS1O15121 323 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 IGLC2P0DOY2 106 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 IGLC3P0DOY3 106 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 SLC38A11Q08AI6 406 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 FAM57AQ8TBR7 257 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 STARD4Q96DR4 205 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 NPFFR1Q9GZQ6 430 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 Q9UF83 564 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 TP53TG3Q9ULZ0 132 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 CHD6Q8TD26 2715 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 IGHV2-70DA0A0C4DH43 119 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 IGKV1-12A0A0C4DH73 117 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 A0A0G2JRQ6 117 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 UBE2L5PA0A1B0GUS4 154 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 GRIFINA4D1Z8 144 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 OR7C1O76099 320 aaPredicted RBP7.6□□□□□ -1.19
SNHG3-201ENST00000413987 IGKV1D-33P01593 117 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 IGKV1-33P01594 117 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 IGKV1D-12P01611 117 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 IAPPP10997 89 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 IGHV1-2P23083 117 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 RSPO1Q2MKA7 263 aaPredicted RBP7.6□□□□□ -1.19
SNHG3-201ENST00000413987 FAM27BQ5VT28 67 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 C12orf54Q6X4T0 127 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 Q6ZPA2 131 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 PNKDQ8N490 385 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 GATD1Q8NB37 220 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 MRAP2Q96G30 205 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 TMEM147Q9BVK8 224 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 SLC25A22Q9H936 323 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 TPSG1Q9NRR2 321 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 KCNIP2Q9NS61 270 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 CACNG5Q9UF02 275 aa7.6□□□□□ -1.19
SNHG3-201ENST00000413987 TRAV30A0A087WSZ9 112 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 SAA2-SAA4A0A096LPE2 208 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 IGKV1D-13A0A0B4J2D9 117 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 WDR1O75083 606 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 ZNF253O75346 499 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 HYPMO75409 117 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 GPX1P07203 203 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 IGKV1-13P0DP09 117 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 LRP11Q86VZ4 500 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 LYG1Q8N1E2 194 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 MUC15Q8N387 334 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 ZNF439Q8NDP4 499 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 FNDC4Q9H6D8 234 aaPredicted RBP7.59□□□□□ -1.19
SNHG3-201ENST00000413987 IGHV2OR16-5A0A0B4J2B6 119 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 C17orf112F2Z3M2 114 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 NAPSAO96009 420 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 LINC00310P59036 64 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 KRTDAPP60985 99 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 ZNF90Q03938 601 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 SPANXN5Q5MJ07 72 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 OR10G8Q8NGN5 311 aa7.59□□□□□ -1.19
SNHG3-201ENST00000413987 DIDO1Q9BTC0 2240 aaKnown RBP7.59□□□□□ -1.2
SNHG3-201ENST00000413987 MYO18BQ8IUG5 2567 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 PRRG2O14669 202 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 PLAUP00749 431 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 SCTP09683 121 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 TMEM14EPQ6UXP3 125 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 ZNF502Q8TBZ5 544 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 RASL11BQ9BPW5 248 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 LINC00470Q9BZP3 86 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 OR2H1Q9GZK4 316 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms