RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 SBSPONQ8IVN8 264 aa9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 VKORC1L1Q8N0U8 176 aa9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 RHOVQ96L33 236 aa9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 CTDSP1Q9GZU7 261 aa9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 NAT8Q9UHE5 227 aa9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 ZNF257Q9Y2Q1 563 aa9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 LCE6AA0A183 80 aa9.86□□□□□ -0.83
CHRNA1-205ENST00000409542 A0A1W2PPE3 182 aa9.86□□□□□ -0.83
CHRNA1-205ENST00000409542 FNDC10F2Z333 226 aa9.86□□□□□ -0.83
CHRNA1-205ENST00000409542 RRHO14718 337 aa9.86□□□□□ -0.83
CHRNA1-205ENST00000409542 TGOLN2O43493 480 aa9.86□□□□□ -0.83
CHRNA1-205ENST00000409542 IGHG2P01859 326 aa9.86□□□□□ -0.83
CHRNA1-205ENST00000409542 TMEM11P17152 192 aa9.86□□□□□ -0.83
CHRNA1-205ENST00000409542 PRRX1P54821 245 aa9.86□□□□□ -0.83
CHRNA1-205ENST00000409542 ATP5IP56385 69 aaPredicted RBP9.86□□□□□ -0.83
CHRNA1-205ENST00000409542 SNRPEP62304 92 aaKnown RBP9.86□□□□□ -0.83
CHRNA1-205ENST00000409542 HES1Q14469 280 aa9.86□□□□□ -0.83
CHRNA1-205ENST00000409542 RTL8BQ17RB0 113 aa9.86□□□□□ -0.83
CHRNA1-205ENST00000409542 C9orf66Q5T8R8 295 aa9.86□□□□□ -0.83
CHRNA1-205ENST00000409542 Q8WTZ3 238 aa9.86□□□□□ -0.83
CHRNA1-205ENST00000409542 TMEM170AQ8WVE7 144 aa9.86□□□□□ -0.83
CHRNA1-205ENST00000409542 ENY2Q9NPA8 101 aa9.86□□□□□ -0.83
CHRNA1-205ENST00000409542 ZNF98A6NK75 572 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 OOSP1A8MZH6 123 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 UPK2O00526 184 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 S100A8P05109 93 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 NPY1RP25929 384 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 GNG10P50151 68 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 CCDC144NLQ6NUI1 221 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 ZNF833PQ6ZTB9 187 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 C8orf31Q8N9H6 132 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 SLC24A4Q8NFF2 622 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 RPEQ96AT9 228 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 RCHY1Q96PM5 261 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 GGTLC1Q9BX51 225 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 TMPRSS5Q9H3S3 457 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 SLC35D1Q9NTN3 355 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 AP4M1O00189 453 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 YIF1AO95070 293 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 CT45A6P0DMU7 189 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 CT45A5P0DMU8 189 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 CT45A7P0DMV0 189 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 SLC35B1P78383 322 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 PRCDQ00LT1 54 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 TMEM241Q24JQ0 296 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 FAM71F2Q6NXP2 309 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 MGST2Q99735 147 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 SMIM7Q9BQ49 75 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 TXNDC17Q9BRA2 123 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 NPVFQ9HCQ7 196 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 FKBP11Q9NYL4 201 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 BET1LQ9NYM9 111 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 OR51B2Q9Y5P1 312 aa9.85□□□□□ -0.83
CHRNA1-205ENST00000409542 J3QR06 171 aa9.84□□□□□ -0.83
CHRNA1-205ENST00000409542 CXCL1P09341 107 aa9.84□□□□□ -0.83
CHRNA1-205ENST00000409542 RPS10P46783 165 aaKnown RBP9.84□□□□□ -0.83
CHRNA1-205ENST00000409542 MEOX2P50222 304 aa9.84□□□□□ -0.83
CHRNA1-205ENST00000409542 ZFAND6Q6FIF0 208 aa9.84□□□□□ -0.83
CHRNA1-205ENST00000409542 ZNF343Q6P1L6 599 aa9.84□□□□□ -0.83
CHRNA1-205ENST00000409542 TEX38Q6PEX7 206 aa9.84□□□□□ -0.83
CHRNA1-205ENST00000409542 LINC00311Q8N616 119 aa9.84□□□□□ -0.83
CHRNA1-205ENST00000409542 OR9G1Q8NH87 305 aa9.84□□□□□ -0.83
CHRNA1-205ENST00000409542 OSR1Q8TAX0 266 aaPredicted RBP9.84□□□□□ -0.83
CHRNA1-205ENST00000409542 TCEAL7Q9BRU2 100 aa9.84□□□□□ -0.83
CHRNA1-205ENST00000409542 ZNF256Q9Y2P7 627 aaPredicted RBP9.84□□□□□ -0.83
CHRNA1-205ENST00000409542 PXMP4Q9Y6I8 212 aa9.84□□□□□ -0.83
CHRNA1-205ENST00000409542 TRBV24-1A0A075B6N3 115 aa9.83□□□□□ -0.84
CHRNA1-205ENST00000409542 IGHV3-72A0A0B4J1Y9 119 aa9.83□□□□□ -0.84
CHRNA1-205ENST00000409542 A0A1W2PPV4 95 aa9.83□□□□□ -0.84
CHRNA1-205ENST00000409542 HMGB3O15347 200 aaKnown RBP9.83□□□□□ -0.84
CHRNA1-205ENST00000409542 PDE6DO43924 150 aa9.83□□□□□ -0.84
CHRNA1-205ENST00000409542 PAGE4O60829 102 aa9.83□□□□□ -0.84
CHRNA1-205ENST00000409542 EIF3GO75821 320 aaKnown RBP eCLIP9.83□□□□□ -0.84
CHRNA1-205ENST00000409542 CA2P00918 260 aa9.83□□□□□ -0.84
CHRNA1-205ENST00000409542 APOA2P02652 100 aa9.83□□□□□ -0.84
CHRNA1-205ENST00000409542 CDX1P47902 265 aaPredicted RBP9.83□□□□□ -0.84
CHRNA1-205ENST00000409542 C12orf57Q99622 126 aa9.83□□□□□ -0.84
CHRNA1-205ENST00000409542 PARLQ9H300 379 aa9.83□□□□□ -0.84
CHRNA1-205ENST00000409542 PLEKHA3Q9HB20 300 aa9.83□□□□□ -0.84
CHRNA1-205ENST00000409542 SORL1Q92673 2214 aa9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 TGIF2-C20orf24A0A0A6YYL0 155 aa9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 F6UZH7 168 aa9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 SMIM6P0DI80 62 aa9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 RPL23P62829 140 aaKnown RBP9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 FABP9Q0Z7S8 132 aa9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 RAB31Q13636 194 aa9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 KIAA0141Q14154 515 aaPredicted RBP9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 ZNF674Q2M3X9 581 aa9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 BSXQ3C1V8 233 aa9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 TMEM177Q53S58 311 aa9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 ASPHD1Q5U4P2 390 aa9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 TEPPQ6URK8 271 aa9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 Q8N9W7 124 aa9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 OR5AN1Q8NGI8 311 aa9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 OR5B3Q8NH48 314 aa9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 GATAD1Q8WUU5 269 aa9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 RPUSD4Q96CM3 377 aaKnown RBP9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 MRPL20Q9BYC9 149 aaKnown RBP9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 SMAD5-AS1Q9Y6J3 95 aa9.82□□□□□ -0.84
CHRNA1-205ENST00000409542 C11orf94C9JXX5 98 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms