RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 ARL3P36405 182 aa12.99□□□□□ -0.33
SSB-202ENST00000409333 YPEL3P61236 119 aaPredicted RBP12.99□□□□□ -0.33
SSB-202ENST00000409333 TMEM41BQ5BJD5 291 aa12.99□□□□□ -0.33
SSB-202ENST00000409333 KHDC1LQ5JSQ8 128 aa12.99□□□□□ -0.33
SSB-202ENST00000409333 RNF141Q8WVD5 230 aa12.99□□□□□ -0.33
SSB-202ENST00000409333 DOK5Q9P104 306 aa12.99□□□□□ -0.33
SSB-202ENST00000409333 UMAD1C9J7I0 102 aa12.98□□□□□ -0.33
SSB-202ENST00000409333 SCGB2A1O75556 95 aa12.98□□□□□ -0.33
SSB-202ENST00000409333 Q6ZRG5 221 aa12.98□□□□□ -0.33
SSB-202ENST00000409333 EIF3GO75821 320 aaKnown RBP eCLIP12.97□□□□□ -0.33
SSB-202ENST00000409333 FABP1P07148 127 aa12.97□□□□□ -0.33
SSB-202ENST00000409333 LGALS1P09382 135 aaKnown RBP12.97□□□□□ -0.33
SSB-202ENST00000409333 M6PRP20645 277 aa12.97□□□□□ -0.33
SSB-202ENST00000409333 ACOT6Q3I5F7 207 aaPredicted RBP12.97□□□□□ -0.33
SSB-202ENST00000409333 SPSB3Q6PJ21 355 aa12.97□□□□□ -0.33
SSB-202ENST00000409333 OR51G1Q8NGK1 321 aa12.97□□□□□ -0.33
SSB-202ENST00000409333 PEF1Q9UBV8 284 aaKnown RBP12.97□□□□□ -0.33
SSB-202ENST00000409333 ZNF705EA8MWA4 302 aaPredicted RBP12.97□□□□□ -0.33
SSB-202ENST00000409333 BMPR1BO00238 502 aa12.97□□□□□ -0.33
SSB-202ENST00000409333 LYZP61626 148 aa12.97□□□□□ -0.33
SSB-202ENST00000409333 SSX7Q7RTT5 188 aa12.97□□□□□ -0.33
SSB-202ENST00000409333 RPP25LQ8N5L8 163 aaKnown RBP12.97□□□□□ -0.33
SSB-202ENST00000409333 OR10G4Q8NGN3 311 aa12.97□□□□□ -0.33
SSB-202ENST00000409333 OR10G9Q8NGN4 311 aa12.97□□□□□ -0.33
SSB-202ENST00000409333 OR10G7Q8NGN6 311 aa12.97□□□□□ -0.33
SSB-202ENST00000409333 FAM213BQ8TBF2 198 aa12.97□□□□□ -0.33
SSB-202ENST00000409333 TMEM37Q8WXS4 190 aa12.97□□□□□ -0.33
SSB-202ENST00000409333 PUS1Q9Y606 427 aaKnown RBP eCLIP12.97□□□□□ -0.33
SSB-202ENST00000409333 IGHV3OR16-8A0A075B7F1 116 aa12.96□□□□□ -0.34
SSB-202ENST00000409333 MBP02144 154 aa12.96□□□□□ -0.34
SSB-202ENST00000409333 IL4P05112 153 aa12.96□□□□□ -0.34
SSB-202ENST00000409333 NMBP08949 121 aa12.96□□□□□ -0.34
SSB-202ENST00000409333 ORM2P19652 201 aa12.96□□□□□ -0.34
SSB-202ENST00000409333 CDX1P47902 265 aaPredicted RBP12.96□□□□□ -0.34
SSB-202ENST00000409333 RAB5CP51148 216 aa12.96□□□□□ -0.34
SSB-202ENST00000409333 ZNF726P1Q15940 193 aa12.96□□□□□ -0.34
SSB-202ENST00000409333 FAM122CQ6P4D5 195 aa12.96□□□□□ -0.34
SSB-202ENST00000409333 PATE2Q6UY27 113 aa12.96□□□□□ -0.34
SSB-202ENST00000409333 ZNF600Q6ZNG1 722 aa12.96□□□□□ -0.34
SSB-202ENST00000409333 PRIMA1Q86XR5 153 aa12.96□□□□□ -0.34
SSB-202ENST00000409333 OR1B1Q8NGR6 318 aa12.96□□□□□ -0.34
SSB-202ENST00000409333 Q8WTZ3 238 aa12.96□□□□□ -0.34
SSB-202ENST00000409333 RNF125Q96EQ8 232 aa12.96□□□□□ -0.34
SSB-202ENST00000409333 CITED2Q99967 270 aaPredicted RBP12.96□□□□□ -0.34
SSB-202ENST00000409333 SLC25A22Q9H936 323 aa12.96□□□□□ -0.34
SSB-202ENST00000409333 I3L521 148 aa12.95□□□□□ -0.34
SSB-202ENST00000409333 OR2C1O95371 312 aa12.95□□□□□ -0.34
SSB-202ENST00000409333 KRTAP10-3P60369 221 aa12.95□□□□□ -0.34
SSB-202ENST00000409333 DEFB136Q30KP8 78 aa12.95□□□□□ -0.34
SSB-202ENST00000409333 RCC1LQ96I51 464 aaKnown RBP12.95□□□□□ -0.34
SSB-202ENST00000409333 PBDC1Q9BVG4 233 aa12.95□□□□□ -0.34
SSB-202ENST00000409333 SEPSECSQ9HD40 501 aaKnown RBP12.95□□□□□ -0.34
SSB-202ENST00000409333 WI2-2373I1.2A0A1W2PRP0 233 aa12.94□□□□□ -0.34
SSB-202ENST00000409333 COX7A2P2O60397 106 aa12.94□□□□□ -0.34
SSB-202ENST00000409333 OR5G3P0C626 314 aa12.94□□□□□ -0.34
SSB-202ENST00000409333 PLP1P60201 277 aa12.94□□□□□ -0.34
SSB-202ENST00000409333 RELQ04864 619 aaPredicted RBP12.94□□□□□ -0.34
SSB-202ENST00000409333 USF2Q15853 346 aaPredicted RBP12.94□□□□□ -0.34
SSB-202ENST00000409333 FAM209BQ5JX69 171 aa12.94□□□□□ -0.34
SSB-202ENST00000409333 SPATA31B1PQ5VZV4 182 aa12.94□□□□□ -0.34
SSB-202ENST00000409333 KLHL30-AS1Q8NEE0 82 aa12.94□□□□□ -0.34
SSB-202ENST00000409333 UHRF2Q96PU4 802 aa12.94□□□□□ -0.34
SSB-202ENST00000409333 ZFAND3Q9H8U3 227 aa12.94□□□□□ -0.34
SSB-202ENST00000409333 ATRQ13535 2644 aa12.94□□□□□ -0.34
SSB-202ENST00000409333 IGHV4OR15-8A0A075B7B6 117 aa12.94□□□□□ -0.34
SSB-202ENST00000409333 A0A087WW49 117 aa12.94□□□□□ -0.34
SSB-202ENST00000409333 A0A1B0GUS0 222 aa12.94□□□□□ -0.34
SSB-202ENST00000409333 TOMM20LQ6UXN7 152 aa12.94□□□□□ -0.34
SSB-202ENST00000409333 DPPA3Q6W0C5 159 aa12.94□□□□□ -0.34
SSB-202ENST00000409333 C4orf3Q8WVX3 66 aa12.94□□□□□ -0.34
SSB-202ENST00000409333 DNAJC4Q9NNZ3 241 aa12.94□□□□□ -0.34
SSB-202ENST00000409333 WNK1Q9H4A3 2382 aa12.93□□□□□ -0.34
SSB-202ENST00000409333 HMGB3O15347 200 aaKnown RBP12.93□□□□□ -0.34
SSB-202ENST00000409333 GGCTO75223 188 aaKnown RBP12.93□□□□□ -0.34
SSB-202ENST00000409333 HYPMO75409 117 aa12.93□□□□□ -0.34
SSB-202ENST00000409333 CDC34P49427 236 aaPredicted RBP12.93□□□□□ -0.34
SSB-202ENST00000409333 FAM78BQ5VT40 261 aa12.93□□□□□ -0.34
SSB-202ENST00000409333 MORN5Q5VZ52 161 aa12.93□□□□□ -0.34
SSB-202ENST00000409333 C10orf113Q5VZT2 155 aa12.93□□□□□ -0.34
SSB-202ENST00000409333 OR1L4Q8NGR5 311 aa12.93□□□□□ -0.34
SSB-202ENST00000409333 LRRC20Q8TCA0 184 aa12.93□□□□□ -0.34
SSB-202ENST00000409333 PFDN5Q99471 154 aa12.93□□□□□ -0.34
SSB-202ENST00000409333 TENM1Q9UKZ4 2725 aa12.93□□□□□ -0.34
SSB-202ENST00000409333 A0A1W2PRX2 142 aa12.92□□□□□ -0.34
SSB-202ENST00000409333 SEC14L6B5MCN3 397 aa12.92□□□□□ -0.34
SSB-202ENST00000409333 RAB14P61106 215 aa12.92□□□□□ -0.34
SSB-202ENST00000409333 RHOBP62745 196 aa12.92□□□□□ -0.34
SSB-202ENST00000409333 FOXL1Q12952 345 aa12.92□□□□□ -0.34
SSB-202ENST00000409333 KRTAP24-1Q3LI83 254 aa12.92□□□□□ -0.34
SSB-202ENST00000409333 CLLU1Q5K131 121 aa12.92□□□□□ -0.34
SSB-202ENST00000409333 PXDC1Q5TGL8 231 aa12.92□□□□□ -0.34
SSB-202ENST00000409333 LINC00305Q7Z4B0 112 aa12.92□□□□□ -0.34
SSB-202ENST00000409333 GATAD1Q8WUU5 269 aa12.92□□□□□ -0.34
SSB-202ENST00000409333 WFDC12Q8WWY7 111 aa12.92□□□□□ -0.34
SSB-202ENST00000409333 RAB24Q969Q5 203 aa12.92□□□□□ -0.34
SSB-202ENST00000409333 SAT2Q96F10 170 aaPredicted RBP12.92□□□□□ -0.34
SSB-202ENST00000409333 ACTR3CQ9C0K3 210 aaPredicted RBP12.92□□□□□ -0.34
SSB-202ENST00000409333 CTXND1A0A1B0GTU2 59 aa12.92□□□□□ -0.34
SSB-202ENST00000409333 A0A1B0GV50 99 aa12.92□□□□□ -0.34
SSB-202ENST00000409333 NUDT19A8MXV4 375 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms