RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 LINC00310P59036 64 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 ARF6P62330 175 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 RELQ04864 619 aaPredicted RBP6.77□□□□□ -1.33
SNX13-201ENST00000409076 SFTA2Q6UW10 78 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 Q8NFD4 153 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 C17orf77Q96MU5 243 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 PRNDQ9UKY0 176 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 PCSK5Q92824 1860 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 PRR33A8MZF0 331 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 HYPMO75409 117 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 TNFSF13O75888 250 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 NCR2O95944 276 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 BPIFB3P59826 476 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 PAFAH1B2P68402 229 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 C17orf58Q2M2W7 97 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 TCTEX1D1Q8N7M0 179 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 ZNF714Q96N38 554 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 FNDC4Q9H6D8 234 aaPredicted RBP6.76□□□□□ -1.33
SNX13-201ENST00000409076 TRBV6-6A0A0A6YYG2 114 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 PPIAL4DF5H284 164 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 FCGR2BP31994 310 aaPredicted RBP6.76□□□□□ -1.33
SNX13-201ENST00000409076 PNKDQ8N490 385 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 BET1LQ9NYM9 111 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 UQCR10Q9UDW1 63 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 LEPROTL1O95214 131 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 LOXL3P58215 753 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 BSPH1Q075Z2 132 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 PRSS57Q6UWY2 283 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 TMEM136Q6ZRR5 245 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 NIT1Q86X76 327 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 HIF1ANQ9NWT6 349 aa6.76□□□□□ -1.33
SNX13-201ENST00000409076 PTPRBP23467 1997 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 COL5A1P20908 1838 aaPredicted RBP6.75□□□□□ -1.33
SNX13-201ENST00000409076 UPK2O00526 184 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 CYC1P08574 325 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 WT1-ASQ06250 92 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 FOXL1Q12952 345 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 TBR1Q16650 682 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 GFRALQ6UXV0 394 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 KLK15Q9H2R5 256 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 LINC00527Q9UJ94 153 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 INSIG2Q9Y5U4 225 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 USP9XQ93008 2570 aaPredicted RBP6.75□□□□□ -1.33
SNX13-201ENST00000409076 MPDU1O75352 247 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 NBEAP1P0C6P0 100 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 KLRD1Q13241 179 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 Q8TAT8 98 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 PYGO2Q9BRQ0 406 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 CHRDL1Q9BU40 450 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 MZT1Q08AG7 82 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 NRN1LQ496H8 165 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 WDR73Q6P4I2 378 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 LCNL1Q6ZST4 164 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 MTURNQ8N3F0 131 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 OR4B1Q8NGF8 309 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 C18orf32Q8TCD1 76 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 RPEQ96AT9 228 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 ZNF503Q96F45 646 aa6.75□□□□□ -1.33
SNX13-201ENST00000409076 PARD6GQ9BYG4 376 aaPredicted RBP6.75□□□□□ -1.33
SNX13-201ENST00000409076 FOXA2Q9Y261 457 aaPredicted RBP6.75□□□□□ -1.33
SNX13-201ENST00000409076 YPEL1O60688 119 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 SS18L1O75177 396 aaPredicted RBP6.74□□□□□ -1.33
SNX13-201ENST00000409076 IGLL1P15814 213 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 RIPPLY3P57055 190 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 RPL11P62913 178 aaKnown RBP6.74□□□□□ -1.33
SNX13-201ENST00000409076 NOTCH2Q04721 2471 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 LRRC10Q5BKY1 277 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 EBLN2Q6P2I7 272 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 FA2HQ7L5A8 372 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 TMEM144Q7Z5S9 345 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 Q8N7P7 452 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 RNASEH2CQ8TDP1 164 aaKnown RBP6.74□□□□□ -1.33
SNX13-201ENST00000409076 YPEL2Q96QA6 119 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 PPIAL4EA0A075B759 164 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 OR2T8A6NH00 312 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 IGKV3-15P01624 115 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 PPIAL4FP0DN26 164 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 RNASE2P10153 161 aaKnown RBP6.74□□□□□ -1.33
SNX13-201ENST00000409076 CD69Q07108 199 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 VMA21Q3ZAQ7 101 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 LDLRAD2Q5SZI1 272 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 C1orf174Q8IYL3 243 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 TMEM75Q8N9X5 138 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 RNASE8Q8TDE3 154 aaKnown RBP6.74□□□□□ -1.33
SNX13-201ENST00000409076 C1orf159Q96HA4 380 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 GAFA1Q96PS6 74 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 ABCA2Q9BZC7 2435 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 DLL1O00548 723 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 HLA-DQA1P01909 254 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 CD99P14209 185 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 CEACAM8P31997 349 aaPredicted RBP6.74□□□□□ -1.33
SNX13-201ENST00000409076 RPL27AP46776 148 aaKnown RBP6.74□□□□□ -1.33
SNX13-201ENST00000409076 SUB1P53999 127 aaKnown RBP eCLIP6.74□□□□□ -1.33
SNX13-201ENST00000409076 GDF5OSQ5U4N7 250 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 LINC00322Q6ZN03 302 aaPredicted RBP6.74□□□□□ -1.33
SNX13-201ENST00000409076 KLHDC1Q8N7A1 406 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 WFDC12Q8WWY7 111 aa6.74□□□□□ -1.33
SNX13-201ENST00000409076 EVI2AP22794 236 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 CD40P25942 277 aa6.73□□□□□ -1.33
SNX13-201ENST00000409076 LOXL4Q96JB6 756 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms