RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 KCNIP4Q6PIL6 250 aa19.44■□□□□ 0.7
DNMT3A-206ENST00000406659 PYGO2Q9BRQ0 406 aa19.44■□□□□ 0.7
DNMT3A-206ENST00000406659 COL12A1Q99715 3063 aa19.43■□□□□ 0.7
DNMT3A-206ENST00000406659 TRAV30A0A087WSZ9 112 aa19.43■□□□□ 0.7
DNMT3A-206ENST00000406659 NRGNQ92686 78 aa19.43■□□□□ 0.7
DNMT3A-206ENST00000406659 ZFYVE26Q68DK2 2539 aa19.43■□□□□ 0.7
DNMT3A-206ENST00000406659 ASH1LQ9NR48 2969 aaKnown RBP19.43■□□□□ 0.7
DNMT3A-206ENST00000406659 CENPWQ5EE01 88 aa19.42■□□□□ 0.7
DNMT3A-206ENST00000406659 ZNF329Q86UD4 541 aa19.42■□□□□ 0.7
DNMT3A-206ENST00000406659 OR10G8Q8NGN5 311 aa19.42■□□□□ 0.7
DNMT3A-206ENST00000406659 S4R3C0 116 aa19.42■□□□□ 0.7
DNMT3A-206ENST00000406659 C5orf52A6NGY3 159 aa19.42■□□□□ 0.7
DNMT3A-206ENST00000406659 GNG7O60262 68 aa19.42■□□□□ 0.7
DNMT3A-206ENST00000406659 ABCA1O95477 2261 aa19.42■□□□□ 0.7
DNMT3A-206ENST00000406659 TRGC2P03986 189 aa19.42■□□□□ 0.7
DNMT3A-206ENST00000406659 SRSF1Q07955 248 aaKnown RBP eCLIP19.42■□□□□ 0.7
DNMT3A-206ENST00000406659 BLNKQ8WV28 456 aa19.42■□□□□ 0.7
DNMT3A-206ENST00000406659 HSPB9Q9BQS6 159 aa19.42■□□□□ 0.7
DNMT3A-206ENST00000406659 TRAV40A0A0B4J280 105 aa19.41■□□□□ 0.7
DNMT3A-206ENST00000406659 K7EN84 100 aa19.41■□□□□ 0.7
DNMT3A-206ENST00000406659 TOMM40O96008 361 aa19.41■□□□□ 0.7
DNMT3A-206ENST00000406659 NBEAP1P0C6P0 100 aa19.41■□□□□ 0.7
DNMT3A-206ENST00000406659 AKR1D1P51857 326 aa19.41■□□□□ 0.7
DNMT3A-206ENST00000406659 CLEC12BQ2HXU8 276 aa19.41■□□□□ 0.7
DNMT3A-206ENST00000406659 LEMD1Q68G75 181 aa19.41■□□□□ 0.7
DNMT3A-206ENST00000406659 TEX38Q6PEX7 206 aa19.41■□□□□ 0.7
DNMT3A-206ENST00000406659 SLC25A39Q9BZJ4 359 aaPredicted RBP19.41■□□□□ 0.7
DNMT3A-206ENST00000406659 ZNF462Q96JM2 2506 aa19.41■□□□□ 0.7
DNMT3A-206ENST00000406659 A0A1W2PPQ1 181 aa19.4■□□□□ 0.7
DNMT3A-206ENST00000406659 A1L4Q6 167 aa19.4■□□□□ 0.7
DNMT3A-206ENST00000406659 MSMBP08118 114 aa19.4■□□□□ 0.7
DNMT3A-206ENST00000406659 SNRPCP09234 159 aaKnown RBP19.4■□□□□ 0.7
DNMT3A-206ENST00000406659 PAX1P15863 534 aa19.4■□□□□ 0.7
DNMT3A-206ENST00000406659 RANP62826 216 aaKnown RBP19.4■□□□□ 0.7
DNMT3A-206ENST00000406659 SGMS2Q8NHU3 365 aa19.4■□□□□ 0.7
DNMT3A-206ENST00000406659 ZNF48Q96MX3 618 aaPredicted RBP19.4■□□□□ 0.7
DNMT3A-206ENST00000406659 IMMP2LQ96T52 175 aa19.4■□□□□ 0.7
DNMT3A-206ENST00000406659 MRPL27Q9P0M9 148 aaKnown RBP19.4■□□□□ 0.7
DNMT3A-206ENST00000406659 ABCA2Q9BZC7 2435 aa19.4■□□□□ 0.7
DNMT3A-206ENST00000406659 AP4M1O00189 453 aa19.39■□□□□ 0.7
DNMT3A-206ENST00000406659 GGCTO75223 188 aaKnown RBP19.39■□□□□ 0.7
DNMT3A-206ENST00000406659 NDUFB8O95169 186 aa19.39■□□□□ 0.7
DNMT3A-206ENST00000406659 GP9P14770 177 aa19.39■□□□□ 0.7
DNMT3A-206ENST00000406659 Q56UQ5 140 aa19.39■□□□□ 0.7
DNMT3A-206ENST00000406659 SRD5A3Q9H8P0 318 aa19.39■□□□□ 0.7
DNMT3A-206ENST00000406659 C21orf62Q9NYP8 219 aa19.39■□□□□ 0.7
DNMT3A-206ENST00000406659 OR2J3O76001 311 aa19.39■□□□□ 0.69
DNMT3A-206ENST00000406659 YPEL3P61236 119 aaPredicted RBP19.39■□□□□ 0.69
DNMT3A-206ENST00000406659 UNQ5815/PRO19632Q6UWF5 114 aa19.39■□□□□ 0.69
DNMT3A-206ENST00000406659 BRD3OSQ6XYD6 125 aa19.39■□□□□ 0.69
DNMT3A-206ENST00000406659 TCEAL7Q9BRU2 100 aa19.39■□□□□ 0.69
DNMT3A-206ENST00000406659 TMUB1Q9BVT8 246 aa19.39■□□□□ 0.69
DNMT3A-206ENST00000406659 PPP5D1E7EU14 171 aa19.38■□□□□ 0.69
DNMT3A-206ENST00000406659 HIST1H1BP16401 226 aaKnown RBP19.38■□□□□ 0.69
DNMT3A-206ENST00000406659 CNN1P51911 297 aaKnown RBP19.38■□□□□ 0.69
DNMT3A-206ENST00000406659 FAM110DQ8TAY7 271 aaPredicted RBP19.38■□□□□ 0.69
DNMT3A-206ENST00000406659 C7orf69Q9H7B7 122 aa19.38■□□□□ 0.69
DNMT3A-206ENST00000406659 PEX7O00628 323 aa19.37■□□□□ 0.69
DNMT3A-206ENST00000406659 TAS2R60P59551 318 aa19.37■□□□□ 0.69
DNMT3A-206ENST00000406659 ECSCRQ19T08 205 aa19.37■□□□□ 0.69
DNMT3A-206ENST00000406659 FBXL7Q9UJT9 491 aa19.37■□□□□ 0.69
DNMT3A-206ENST00000406659 UBE2CO00762 179 aa19.37■□□□□ 0.69
DNMT3A-206ENST00000406659 ATP6V0E1O15342 81 aa19.37■□□□□ 0.69
DNMT3A-206ENST00000406659 MYCNOSP40205 109 aa19.37■□□□□ 0.69
DNMT3A-206ENST00000406659 FAM3BP58499 235 aaPredicted RBP19.37■□□□□ 0.69
DNMT3A-206ENST00000406659 ZNF491Q8N8L2 437 aa19.37■□□□□ 0.69
DNMT3A-206ENST00000406659 RNF125Q96EQ8 232 aa19.37■□□□□ 0.69
DNMT3A-206ENST00000406659 TMEM14CQ9P0S9 112 aa19.37■□□□□ 0.69
DNMT3A-206ENST00000406659 A0A0U1RQK1 487 aa19.36■□□□□ 0.69
DNMT3A-206ENST00000406659 PGPA6NDG6 321 aa19.36■□□□□ 0.69
DNMT3A-206ENST00000406659 B4DSR2 109 aa19.36■□□□□ 0.69
DNMT3A-206ENST00000406659 SCGB2A1O75556 95 aa19.36■□□□□ 0.69
DNMT3A-206ENST00000406659 IL4P05112 153 aa19.36■□□□□ 0.69
DNMT3A-206ENST00000406659 SLC25A5P05141 298 aaKnown RBP19.36■□□□□ 0.69
DNMT3A-206ENST00000406659 SLC25A16P16260 332 aa19.36■□□□□ 0.69
DNMT3A-206ENST00000406659 FABP9Q0Z7S8 132 aa19.36■□□□□ 0.69
DNMT3A-206ENST00000406659 FOXL1Q12952 345 aa19.36■□□□□ 0.69
DNMT3A-206ENST00000406659 OR5I1Q13606 314 aa19.36■□□□□ 0.69
DNMT3A-206ENST00000406659 ZNF600Q6ZNG1 722 aa19.36■□□□□ 0.69
DNMT3A-206ENST00000406659 C5orf56Q8N8D9 126 aa19.36■□□□□ 0.69
DNMT3A-206ENST00000406659 BTF3L4Q96K17 158 aa19.36■□□□□ 0.69
DNMT3A-206ENST00000406659 SHANK2-AS3Q9BTD1 123 aa19.36■□□□□ 0.69
DNMT3A-206ENST00000406659 MEGF9Q9H1U4 602 aa19.36■□□□□ 0.69
DNMT3A-206ENST00000406659 CDC42EP3Q9UKI2 254 aa19.36■□□□□ 0.69
DNMT3A-206ENST00000406659 WI2-2373I1.2A0A1W2PRP0 233 aa19.35■□□□□ 0.69
DNMT3A-206ENST00000406659 IGHV4-38-2P0DP08 117 aa19.35■□□□□ 0.69
DNMT3A-206ENST00000406659 ERVFC1-1P60608 527 aa19.35■□□□□ 0.69
DNMT3A-206ENST00000406659 S100A7AQ86SG5 101 aa19.35■□□□□ 0.69
DNMT3A-206ENST00000406659 IGF2BP2-AS1Q96M15 143 aa19.35■□□□□ 0.69
DNMT3A-206ENST00000406659 MOB4Q9Y3A3 225 aa19.35■□□□□ 0.69
DNMT3A-206ENST00000406659 SPG11Q96JI7 2443 aa19.35■□□□□ 0.69
DNMT3A-206ENST00000406659 NDUFA6P56556 154 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 TMEM219Q86XT9 240 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 TMEM68Q96MH6 324 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 EPDR1Q9UM22 224 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 F8W735 103 aaPredicted RBP19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 H3BRN7 92 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 HIST1H2BKO60814 126 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 IGHV3-23P01764 117 aa19.34■□□□□ 0.69
DNMT3A-206ENST00000406659 HIST1H2BJP06899 126 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms