RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 FAM234AQ9H0X4 552 aa13.19□□□□□ -0.3
COL4A3BP-204ENST00000405807 SLC25A10Q9UBX3 287 aaPredicted RBP13.19□□□□□ -0.3
COL4A3BP-204ENST00000405807 METRNQ9UJH8 293 aa13.19□□□□□ -0.3
COL4A3BP-204ENST00000405807 DOCK10Q96BY6 2186 aa13.19□□□□□ -0.3
COL4A3BP-204ENST00000405807 TRAV3A0A0B4J244 114 aa13.19□□□□□ -0.3
COL4A3BP-204ENST00000405807 MPV17P39210 176 aa13.19□□□□□ -0.3
COL4A3BP-204ENST00000405807 REG1BP48304 166 aa13.19□□□□□ -0.3
COL4A3BP-204ENST00000405807 HOXA4Q00056 320 aaPredicted RBP13.19□□□□□ -0.3
COL4A3BP-204ENST00000405807 SRSF1Q07955 248 aaKnown RBP eCLIP13.19□□□□□ -0.33e-6■■■■□ 19.7
COL4A3BP-204ENST00000405807 OSR1Q8TAX0 266 aaPredicted RBP13.19□□□□□ -0.3
COL4A3BP-204ENST00000405807 HLA-DQA1P01909 254 aa13.18□□□□□ -0.3
COL4A3BP-204ENST00000405807 AMY1AP04745 511 aa13.18□□□□□ -0.3
COL4A3BP-204ENST00000405807 ATP5IP56385 69 aaPredicted RBP13.18□□□□□ -0.3
COL4A3BP-204ENST00000405807 PSG5Q15238 335 aa13.18□□□□□ -0.3
COL4A3BP-204ENST00000405807 DCTN5Q9BTE1 182 aa13.18□□□□□ -0.3
COL4A3BP-204ENST00000405807 FCGR2BP31994 310 aaPredicted RBP13.18□□□□□ -0.3
COL4A3BP-204ENST00000405807 KIR2DS2P43631 304 aa13.18□□□□□ -0.3
COL4A3BP-204ENST00000405807 PRR20EP86478 221 aa13.18□□□□□ -0.3
COL4A3BP-204ENST00000405807 PRR20CP86479 221 aa13.18□□□□□ -0.3
COL4A3BP-204ENST00000405807 PRR20DP86480 221 aa13.18□□□□□ -0.3
COL4A3BP-204ENST00000405807 PRR20BP86481 221 aa13.18□□□□□ -0.3
COL4A3BP-204ENST00000405807 PRR20AP86496 221 aa13.18□□□□□ -0.3
COL4A3BP-204ENST00000405807 RNASE7Q9H1E1 156 aaKnown RBP13.18□□□□□ -0.3
COL4A3BP-204ENST00000405807 ENY2Q9NPA8 101 aa13.18□□□□□ -0.3
COL4A3BP-204ENST00000405807 MIR17HGQ75NE6 70 aa13.17□□□□□ -0.3
COL4A3BP-204ENST00000405807 PLPPR2Q96GM1 343 aa13.17□□□□□ -0.3
COL4A3BP-204ENST00000405807 KIR2DL2P43627 348 aaPredicted RBP13.17□□□□□ -0.3
COL4A3BP-204ENST00000405807 EDDM3AQ14507 147 aa13.17□□□□□ -0.3
COL4A3BP-204ENST00000405807 FRYQ5TBA9 3013 aa13.17□□□□□ -0.3
COL4A3BP-204ENST00000405807 PCSK5Q92824 1860 aa13.17□□□□□ -0.3
COL4A3BP-204ENST00000405807 DNAJC13O75165 2243 aa13.17□□□□□ -0.3
COL4A3BP-204ENST00000405807 hADV38S2A0JD32 116 aa13.17□□□□□ -0.3
COL4A3BP-204ENST00000405807 ACTL6BO94805 426 aa13.17□□□□□ -0.3
COL4A3BP-204ENST00000405807 TIMM23BQ5SRD1 257 aa13.17□□□□□ -0.3
COL4A3BP-204ENST00000405807 PPP1R35Q8TAP8 253 aa13.17□□□□□ -0.3
COL4A3BP-204ENST00000405807 MEOX1P50221 254 aa13.16□□□□□ -0.3
COL4A3BP-204ENST00000405807 SLC35B1P78383 322 aa13.16□□□□□ -0.3
COL4A3BP-204ENST00000405807 FXYD3Q14802 87 aa13.16□□□□□ -0.3
COL4A3BP-204ENST00000405807 RPL39P5Q59GN2 51 aa13.16□□□□□ -0.3
COL4A3BP-204ENST00000405807 ZFAND6Q6FIF0 208 aa13.16□□□□□ -0.3
COL4A3BP-204ENST00000405807 GCSAMQ8N6F7 178 aa13.16□□□□□ -0.3
COL4A3BP-204ENST00000405807 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.16□□□□□ -0.3
COL4A3BP-204ENST00000405807 TECRQ9NZ01 308 aaKnown RBP13.16□□□□□ -0.3
COL4A3BP-204ENST00000405807 A0A1W2PRE2 83 aa13.16□□□□□ -0.3
COL4A3BP-204ENST00000405807 C15orf61A6NNL5 157 aa13.16□□□□□ -0.3
COL4A3BP-204ENST00000405807 FNDC10F2Z333 226 aa13.16□□□□□ -0.3
COL4A3BP-204ENST00000405807 APCSP02743 223 aa13.16□□□□□ -0.3
COL4A3BP-204ENST00000405807 TCL1AP56279 114 aa13.16□□□□□ -0.3
COL4A3BP-204ENST00000405807 KLRD1Q13241 179 aa13.16□□□□□ -0.3
COL4A3BP-204ENST00000405807 TMEM191AQ9H0A3 160 aa13.16□□□□□ -0.3
COL4A3BP-204ENST00000405807 MS4A6AQ9H2W1 248 aa13.16□□□□□ -0.3
COL4A3BP-204ENST00000405807 SMIM27A0A1W2PRY6 76 aa13.15□□□□□ -0.3
COL4A3BP-204ENST00000405807 PATE3B3GLJ2 98 aa13.15□□□□□ -0.3
COL4A3BP-204ENST00000405807 CRXO43186 299 aaPredicted RBP13.15□□□□□ -0.3
COL4A3BP-204ENST00000405807 CT45A10P0DMU9 189 aa13.15□□□□□ -0.3
COL4A3BP-204ENST00000405807 COX8AP10176 69 aa13.15□□□□□ -0.3
COL4A3BP-204ENST00000405807 HSPE1P61604 102 aaKnown RBP13.15□□□□□ -0.3
COL4A3BP-204ENST00000405807 IBA57Q5T440 356 aaKnown RBP13.15□□□□□ -0.3
COL4A3BP-204ENST00000405807 FAM90A1Q86YD7 464 aa13.15□□□□□ -0.3
COL4A3BP-204ENST00000405807 PRDX2P32119 198 aa13.15□□□□□ -0.3
COL4A3BP-204ENST00000405807 CD177Q8N6Q3 437 aa13.15□□□□□ -0.3
COL4A3BP-204ENST00000405807 PMCHL2Q9BQD1 86 aa13.15□□□□□ -0.3
COL4A3BP-204ENST00000405807 KLF13Q9Y2Y9 288 aaPredicted RBP13.15□□□□□ -0.3
COL4A3BP-204ENST00000405807 SMIM9A6NGZ8 99 aa13.14□□□□□ -0.31
COL4A3BP-204ENST00000405807 SYS1-DBNDD2H3BUS1 97 aa13.14□□□□□ -0.31
COL4A3BP-204ENST00000405807 IGHV1-2P23083 117 aa13.14□□□□□ -0.31
COL4A3BP-204ENST00000405807 Q6AWC8 147 aa13.14□□□□□ -0.31
COL4A3BP-204ENST00000405807 RNASEKQ6P5S7 137 aaKnown RBP13.14□□□□□ -0.31
COL4A3BP-204ENST00000405807 TEX29Q8N6K0 151 aa13.14□□□□□ -0.31
COL4A3BP-204ENST00000405807 NABP2Q9BQ15 211 aa13.14□□□□□ -0.31
COL4A3BP-204ENST00000405807 PLEKHA3Q9HB20 300 aa13.14□□□□□ -0.31
COL4A3BP-204ENST00000405807 ZNF331Q9NQX6 463 aaPredicted RBP13.14□□□□□ -0.31
COL4A3BP-204ENST00000405807 FOXA2Q9Y261 457 aaPredicted RBP13.14□□□□□ -0.31
COL4A3BP-204ENST00000405807 PRSS29PA6NIE9 313 aa13.14□□□□□ -0.31
COL4A3BP-204ENST00000405807 TIMM8AO60220 97 aaPredicted RBP13.14□□□□□ -0.31
COL4A3BP-204ENST00000405807 RTL8BQ17RB0 113 aa13.14□□□□□ -0.31
COL4A3BP-204ENST00000405807 IZUMO1RA6ND01 250 aa13.13□□□□□ -0.31
COL4A3BP-204ENST00000405807 MGST1P10620 155 aaKnown RBP13.13□□□□□ -0.31
COL4A3BP-204ENST00000405807 COL8A2P25067 703 aa13.13□□□□□ -0.31
COL4A3BP-204ENST00000405807 PIMREGQ9BSJ6 248 aa13.13□□□□□ -0.31
COL4A3BP-204ENST00000405807 DEFB127Q9H1M4 99 aa13.13□□□□□ -0.31
COL4A3BP-204ENST00000405807 TMEM14BQ9NUH8 114 aa13.13□□□□□ -0.31
COL4A3BP-204ENST00000405807 FAM186AA6NE01 2351 aa13.13□□□□□ -0.31
COL4A3BP-204ENST00000405807 PTPRBP23467 1997 aa13.13□□□□□ -0.31
COL4A3BP-204ENST00000405807 HCFC1P51610 2035 aa13.13□□□□□ -0.31
COL4A3BP-204ENST00000405807 LYZL6O75951 148 aa13.13□□□□□ -0.31
COL4A3BP-204ENST00000405807 TAS2R45P59539 299 aa13.13□□□□□ -0.31
COL4A3BP-204ENST00000405807 IFI27L2Q9H2X8 130 aa13.13□□□□□ -0.31
COL4A3BP-204ENST00000405807 RABAC1Q9UI14 185 aa13.13□□□□□ -0.31
COL4A3BP-204ENST00000405807 ZNF134P52741 427 aa13.12□□□□□ -0.31
COL4A3BP-204ENST00000405807 LRRC29Q8WV35 223 aa13.12□□□□□ -0.31
COL4A3BP-204ENST00000405807 UBTD1Q9HAC8 227 aa13.12□□□□□ -0.31
COL4A3BP-204ENST00000405807 IGLV2-8P01709 118 aa13.12□□□□□ -0.31
COL4A3BP-204ENST00000405807 IGHV3-7P01780 117 aa13.12□□□□□ -0.31
COL4A3BP-204ENST00000405807 C1RLQ9NZP8 487 aa13.12□□□□□ -0.31
COL4A3BP-204ENST00000405807 A0A1W2PRD5 423 aa13.12□□□□□ -0.31
COL4A3BP-204ENST00000405807 A0A1W2PRF3 423 aa13.12□□□□□ -0.31
COL4A3BP-204ENST00000405807 A0A1W2PRM7 423 aa13.12□□□□□ -0.31
COL4A3BP-204ENST00000405807 MFAP4P55083 255 aa13.12□□□□□ -0.31
COL4A3BP-204ENST00000405807 LOXL3P58215 753 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms