RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 SRIP30626 198 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 CA7P43166 264 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 USF2Q15853 346 aaPredicted RBP3.07□□□□□ -1.92
RTN4-209ENST00000405240 BAGE3Q86Y29 109 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 BAGE2Q86Y30 109 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 ARL6IP6Q8N6S5 226 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 C5orf17Q8NAS9 161 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 GTSF1Q8WW33 167 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 ABHD17AQ96GS6 310 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 ZNF414Q96IQ9 312 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 TNFRSF19Q9NS68 423 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 RALYQ9UKM9 306 aaKnown RBP3.07□□□□□ -1.92
RTN4-209ENST00000405240 IGHV1-69-2A0A0G2JMI3 117 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 C20orf202A1L168 122 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 ODF3BA8MYP8 253 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 HAX1O00165 279 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 TCAPO15273 167 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 SLC25A17O43808 307 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 TCRAP04437 139 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 C3orf79P0CE67 100 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 IGLC2P0DOY2 106 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 HIST1H1EP10412 219 aaKnown RBP3.06□□□□□ -1.92
RTN4-209ENST00000405240 CNTFRP26992 372 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 REG1BP48304 166 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 HCP5Q6MZN7 132 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 WFDC8Q8IUA0 241 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 SIGLECL1Q8N7X8 197 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 OR11H6Q8NGC7 330 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 CFHR4Q92496 578 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 NDFIP1Q9BT67 221 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 OTORQ9NRC9 128 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 SIAH2O43255 324 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 NBEAP1P0C6P0 100 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 IGLC3P0DOY3 106 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 RPL27AP46776 148 aaKnown RBP3.06□□□□□ -1.92
RTN4-209ENST00000405240 LDLRAD2Q5SZI1 272 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 LYPD1Q8N2G4 141 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 TMEM75Q8N9X5 138 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 VN1R17PQ8TDU5 208 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 VKORC1Q9BQB6 163 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 RPP21Q9H633 154 aaKnown RBP3.06□□□□□ -1.92
RTN4-209ENST00000405240 ZNF586Q9NXT0 402 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 OTOGLQ3ZCN5 2332 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 GPR179Q6PRD1 2367 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 FAM181BA6NEQ2 426 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 DIRC3C9JPN6 131 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 H3BRN7 92 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 K7EIM0 57 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 HYPMO75409 117 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 CA1P00915 261 aaPredicted RBP3.06□□□□□ -1.92
RTN4-209ENST00000405240 GNG5P63218 68 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 TNXAQ16473 311 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 EBLN2Q6P2I7 272 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 Q86TA4 180 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 PPP1R27Q86WC6 154 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 CHCHD1Q96BP2 118 aaKnown RBP3.06□□□□□ -1.92
RTN4-209ENST00000405240 CLEC7AQ9BXN2 247 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 Q9H3A6 140 aa3.06□□□□□ -1.92
RTN4-209ENST00000405240 TRAV34A0A0B4J273 112 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 HIGD1CA8MV81 97 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 IGKV1-17P01599 117 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 KIAA1644Q3SXP7 199 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 SPATA12Q7Z6I5 190 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 ZNF575Q86XF7 245 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 Q8N6K4 173 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 IGFBPL1Q8WX77 278 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 CCL17Q92583 94 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 SHANK2-AS3Q9BTD1 123 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 VAMP8Q9BV40 100 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 SSBP3Q9BWW4 388 aaPredicted RBP3.05□□□□□ -1.92
RTN4-209ENST00000405240 SLC25A39Q9BZJ4 359 aaPredicted RBP3.05□□□□□ -1.92
RTN4-209ENST00000405240 ZNF331Q9NQX6 463 aaPredicted RBP3.05□□□□□ -1.92
RTN4-209ENST00000405240 MRPS16Q9Y3D3 137 aaKnown RBP3.05□□□□□ -1.92
RTN4-209ENST00000405240 PGPA6NDG6 321 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 A6NNC1 897 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 ZNF705FA8MVS1 300 aaPredicted RBP3.05□□□□□ -1.92
RTN4-209ENST00000405240 VSTM5A8MXK1 200 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 F8W735 103 aaPredicted RBP3.05□□□□□ -1.92
RTN4-209ENST00000405240 KLK10O43240 276 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 FAM87AP0C7U9 286 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 ZNF705DP0CH99 300 aaPredicted RBP3.05□□□□□ -1.92
RTN4-209ENST00000405240 ZNF705BP0CI00 300 aaPredicted RBP3.05□□□□□ -1.92
RTN4-209ENST00000405240 MGST1P10620 155 aaKnown RBP3.05□□□□□ -1.92
RTN4-209ENST00000405240 TCL1AP56279 114 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 HBBP68871 147 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 EBI3Q14213 229 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 ZNF124Q15973 351 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 PMCHL1Q16048 86 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 C11orf71Q6IPW1 123 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 MRPL54Q6P161 138 aaKnown RBP3.05□□□□□ -1.92
RTN4-209ENST00000405240 ZNF493Q6ZR52 646 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 H1FXQ92522 213 aaKnown RBP3.05□□□□□ -1.92
RTN4-209ENST00000405240 TMEM68Q96MH6 324 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 NGBQ9NPG2 151 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 U3KQK5 164 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 KNTC1P50748 2209 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 TRBV19A0A075B6N1 114 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 LINC01546A6NGU7 62 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 NPIPB5A8MRT5 1133 aa3.05□□□□□ -1.92
RTN4-209ENST00000405240 K7ENP7 123 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms