RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 ADMP35318 185 aa9.18□□□□□ -0.94
CACNA1C-215ENST00000399637 GAGE2BQ13066 116 aa9.18□□□□□ -0.94
CACNA1C-215ENST00000399637 ATXN8Q156A1 80 aa9.18□□□□□ -0.94
CACNA1C-215ENST00000399637 IGKCP01834 107 aa9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 ZFAND6Q6FIF0 208 aa9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 CTHRC1Q96CG8 243 aa9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 REG4Q9BYZ8 158 aa9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 BPESC1Q9GZL8 116 aa9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 MRPS18CQ9Y3D5 142 aaKnown RBP9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 GATA2P23769 480 aaPredicted RBP9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 LMO1P25800 156 aa9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 TRAV8-3A0A0A6YYJ7 113 aa9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 SEC11AP67812 179 aa9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 A0A0G2JNJ9 132 aa9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 Q9UFV3 132 aa9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 XIRP1Q702N8 1843 aaKnown RBP9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 C15orf61A6NNL5 157 aa9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 DUTP33316 252 aaKnown RBP9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 TCF15Q12870 199 aa9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 FAM19A2Q8N3H0 131 aa9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 PRDM13Q9H4Q3 707 aa9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 TDRD15B5MCY1 1934 aaKnown RBP9.17□□□□□ -0.94
CACNA1C-215ENST00000399637 A0A0G2JMZ2 1700 aa9.16□□□□□ -0.94
CACNA1C-215ENST00000399637 LRRC37A2A6NM11 1700 aa9.16□□□□□ -0.94
CACNA1C-215ENST00000399637 YPEL1O60688 119 aa9.16□□□□□ -0.94
CACNA1C-215ENST00000399637 YPEL2Q96QA6 119 aa9.16□□□□□ -0.94
CACNA1C-215ENST00000399637 FGF16O43320 207 aa9.16□□□□□ -0.94
CACNA1C-215ENST00000399637 PSG7Q13046 419 aa9.16□□□□□ -0.94
CACNA1C-215ENST00000399637 LINC01590Q5TEZ4 76 aa9.16□□□□□ -0.94
CACNA1C-215ENST00000399637 RALGAPA2Q2PPJ7 1873 aa9.16□□□□□ -0.94
CACNA1C-215ENST00000399637 TRAV13-1A0A0B4J241 112 aa9.16□□□□□ -0.94
CACNA1C-215ENST00000399637 UMODP07911 640 aa9.16□□□□□ -0.94
CACNA1C-215ENST00000399637 RMI2Q96E14 147 aa9.16□□□□□ -0.94
CACNA1C-215ENST00000399637 MPZP25189 248 aa9.16□□□□□ -0.94
CACNA1C-215ENST00000399637 LTBP1Q14766 1721 aa9.16□□□□□ -0.94
CACNA1C-215ENST00000399637 A0A1W2PPI3 338 aa9.16□□□□□ -0.94
CACNA1C-215ENST00000399637 UBE2CO00762 179 aa9.16□□□□□ -0.94
CACNA1C-215ENST00000399637 CD5P06127 495 aa9.16□□□□□ -0.94
CACNA1C-215ENST00000399637 TMEM158Q8WZ71 300 aa9.16□□□□□ -0.94
CACNA1C-215ENST00000399637 OR9G9P0C7N8 305 aa9.15□□□□□ -0.94
CACNA1C-215ENST00000399637 RUSC1-AS1Q66K80 236 aa9.15□□□□□ -0.94
CACNA1C-215ENST00000399637 C18orf12Q96KH6 178 aa9.15□□□□□ -0.94
CACNA1C-215ENST00000399637 IGHV4-28A0A0C4DH34 117 aa9.15□□□□□ -0.94
CACNA1C-215ENST00000399637 LINC00587B1AMM8 73 aa9.15□□□□□ -0.94
CACNA1C-215ENST00000399637 F2Z2F3 143 aa9.15□□□□□ -0.94
CACNA1C-215ENST00000399637 SRP19P09132 144 aaKnown RBP9.15□□□□□ -0.94
CACNA1C-215ENST00000399637 SNHG12Q9BXW3 62 aa9.15□□□□□ -0.94
CACNA1C-215ENST00000399637 RNASE7Q9H1E1 156 aaKnown RBP9.15□□□□□ -0.94
CACNA1C-215ENST00000399637 PSG8Q9UQ74 426 aa9.15□□□□□ -0.94
CACNA1C-215ENST00000399637 THAP8Q8NA92 274 aa9.15□□□□□ -0.94
CACNA1C-215ENST00000399637 PLSCR4Q9NRQ2 329 aa9.15□□□□□ -0.94
CACNA1C-215ENST00000399637 PRR30Q53SZ7 412 aaPredicted RBP9.15□□□□□ -0.94
CACNA1C-215ENST00000399637 RTBDNQ9BSG5 229 aaPredicted RBP9.15□□□□□ -0.94
CACNA1C-215ENST00000399637 A0A087WWC5 75 aa9.15□□□□□ -0.95
CACNA1C-215ENST00000399637 A0A1B0GTI1 187 aa9.15□□□□□ -0.95
CACNA1C-215ENST00000399637 ZNF561-AS1K7EIQ3 104 aa9.15□□□□□ -0.95
CACNA1C-215ENST00000399637 LGALS1P09382 135 aaKnown RBP9.15□□□□□ -0.95
CACNA1C-215ENST00000399637 UCP1P25874 307 aa9.15□□□□□ -0.95
CACNA1C-215ENST00000399637 TMEM144Q7Z5S9 345 aa9.15□□□□□ -0.95
CACNA1C-215ENST00000399637 MCM3APO60318 1980 aa9.15□□□□□ -0.95
CACNA1C-215ENST00000399637 SHISA3A0PJX4 238 aa9.15□□□□□ -0.95
CACNA1C-215ENST00000399637 A6NNC1 897 aa9.15□□□□□ -0.95
CACNA1C-215ENST00000399637 MSMBP08118 114 aa9.15□□□□□ -0.95
CACNA1C-215ENST00000399637 TRAV5A0A0B4J249 113 aa9.14□□□□□ -0.95
CACNA1C-215ENST00000399637 PLPPR1Q8TBJ4 325 aa9.14□□□□□ -0.95
CACNA1C-215ENST00000399637 SCRT1Q9BWW7 348 aa9.14□□□□□ -0.95
CACNA1C-215ENST00000399637 MDC1Q14676 2089 aaKnown RBP9.14□□□□□ -0.95
CACNA1C-215ENST00000399637 K7ENP7 123 aa9.14□□□□□ -0.95
CACNA1C-215ENST00000399637 UNC13CQ8NB66 2214 aa9.14□□□□□ -0.95
CACNA1C-215ENST00000399637 LAGE3Q14657 143 aa9.14□□□□□ -0.95
CACNA1C-215ENST00000399637 MORN2Q502X0 79 aa9.14□□□□□ -0.95
CACNA1C-215ENST00000399637 IGHV4-4A0A075B6R2 117 aa9.14□□□□□ -0.95
CACNA1C-215ENST00000399637 IGHV1-18A0A0C4DH31 117 aa9.14□□□□□ -0.95
CACNA1C-215ENST00000399637 FCN3O75636 299 aa9.14□□□□□ -0.95
CACNA1C-215ENST00000399637 PPBPP02775 128 aa9.14□□□□□ -0.95
CACNA1C-215ENST00000399637 FOXF2Q12947 444 aa9.14□□□□□ -0.95
CACNA1C-215ENST00000399637 ZNF236Q9UL36 1845 aa9.14□□□□□ -0.95
CACNA1C-215ENST00000399637 ZNF497Q6ZNH5 498 aa9.13□□□□□ -0.95
CACNA1C-215ENST00000399637 SPATA25Q9BR10 227 aa9.13□□□□□ -0.95
CACNA1C-215ENST00000399637 LINC01549A6NIU2 74 aa9.13□□□□□ -0.95
CACNA1C-215ENST00000399637 GAS1P54826 345 aa9.13□□□□□ -0.95
CACNA1C-215ENST00000399637 F8VVB4 439 aa9.13□□□□□ -0.95
CACNA1C-215ENST00000399637 F8VWA3 439 aa9.13□□□□□ -0.95
CACNA1C-215ENST00000399637 CCL20P78556 96 aa9.13□□□□□ -0.95
CACNA1C-215ENST00000399637 RASL10AQ92737 203 aa9.13□□□□□ -0.95
CACNA1C-215ENST00000399637 CHCHD1Q96BP2 118 aaKnown RBP9.13□□□□□ -0.95
CACNA1C-215ENST00000399637 ERG28Q9UKR5 140 aa9.13□□□□□ -0.95
CACNA1C-215ENST00000399637 KLF2Q9Y5W3 355 aaPredicted RBP9.13□□□□□ -0.95
CACNA1C-215ENST00000399637 LY6HO94772 140 aa9.13□□□□□ -0.95
CACNA1C-215ENST00000399637 BRWD1Q9NSI6 2320 aa9.13□□□□□ -0.95
CACNA1C-215ENST00000399637 LINC01619G3V211 115 aa9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 J3QRE1 110 aa9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 PRCDQ00LT1 54 aa9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 A8MWV9 139 aa9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 TMEM238C9JI98 176 aa9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 CD300EQ496F6 205 aaPredicted RBP9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 TNFSF13O75888 250 aa9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 IGKV1D-43A0A0B4J1Z2 117 aa9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 PSG1P11464 419 aa9.12□□□□□ -0.95
CACNA1C-215ENST00000399637 CCL1P22362 96 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms