RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 NAA38Q9BRA0 125 aaKnown RBP9.07□□□□□ -0.96
CSGALNACT1-202ENST00000397998 LSM4Q9Y4Z0 139 aaKnown RBP9.07□□□□□ -0.96
CSGALNACT1-202ENST00000397998 XIRP2A4UGR9 3374 aa9.07□□□□□ -0.96
CSGALNACT1-202ENST00000397998 TMEM265A0A087WTH1 108 aa9.07□□□□□ -0.96
CSGALNACT1-202ENST00000397998 TMEM189A5PLL7 270 aa9.07□□□□□ -0.96
CSGALNACT1-202ENST00000397998 COL8A2P25067 703 aa9.07□□□□□ -0.96
CSGALNACT1-202ENST00000397998 PRR20EP86478 221 aa9.07□□□□□ -0.96
CSGALNACT1-202ENST00000397998 PRR20CP86479 221 aa9.07□□□□□ -0.96
CSGALNACT1-202ENST00000397998 PRR20DP86480 221 aa9.07□□□□□ -0.96
CSGALNACT1-202ENST00000397998 PRR20BP86481 221 aa9.07□□□□□ -0.96
CSGALNACT1-202ENST00000397998 PRR20AP86496 221 aa9.07□□□□□ -0.96
CSGALNACT1-202ENST00000397998 GUCD1Q96NT3 240 aa9.07□□□□□ -0.96
CSGALNACT1-202ENST00000397998 HILPDAQ9Y5L2 63 aa9.07□□□□□ -0.96
CSGALNACT1-202ENST00000397998 LRP4O75096 1905 aa9.07□□□□□ -0.96
CSGALNACT1-202ENST00000397998 PRRC2CQ9Y520 2896 aaKnown RBP9.07□□□□□ -0.96
CSGALNACT1-202ENST00000397998 IGHV1-69-2A0A0G2JMI3 117 aa9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 GCSHP23434 173 aa9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 GPR183P32249 361 aa9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 RELQ04864 619 aaPredicted RBP9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 CDH23Q9H251 3354 aa9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 TWIST1Q15672 202 aa9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 SAPCD1Q5SSQ6 148 aa9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 CIARTQ8N365 385 aaPredicted RBP9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 KIR3DL3Q8N743 410 aa9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 TMEM116Q8NCL8 245 aa9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 C18orf15Q96N68 181 aa9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 ST20Q9HBF5 79 aa9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 MRPS16Q9Y3D3 137 aaKnown RBP9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 TTC28Q96AY4 2481 aa9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 C16orf97H3BN30 126 aa9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 TM4SF5O14894 197 aa9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 MBNL2Q5VZF2 373 aaKnown RBP9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 Q8TCH9 128 aa9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 LINC00312Q9Y6C7 94 aa9.06□□□□□ -0.96
CSGALNACT1-202ENST00000397998 SYS1-DBNDD2H3BUS1 97 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 ASCL2Q99929 193 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 FBXL15Q9H469 300 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 FNDC4Q9H6D8 234 aaPredicted RBP9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 PCNX2A6NKB5 2137 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 KLK10O43240 276 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 P0C879 139 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 FMC1Q96HJ9 113 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 TMUB1Q9BVT8 246 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 THYN1Q9P016 225 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 DNAH14Q0VDD8 3507 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 IGHV3-35A0A0C4DH35 117 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 J3QR89 54 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 MMP23AO75900 390 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 PSG1P11464 419 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 GFRALQ6UXV0 394 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 EXOC3-AS1Q8N2X6 119 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 ZNF71Q9NQZ8 489 aaPredicted RBP9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 UFC1Q9Y3C8 167 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 SRRM4A7MD48 611 aaKnown RBP9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 PROP1O75360 226 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 IGHV1-46P01743 117 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 IL4P05112 153 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 LGALS7P47929 136 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 TMPRSS3P57727 454 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 RASL11AQ6T310 242 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 ATP5L2Q7Z4Y8 100 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 ZNF329Q86UD4 541 aa9.05□□□□□ -0.96
CSGALNACT1-202ENST00000397998 SMIM27A0A1W2PRY6 76 aa9.04□□□□□ -0.96
CSGALNACT1-202ENST00000397998 H3BUT2 72 aa9.04□□□□□ -0.96
CSGALNACT1-202ENST00000397998 CCL25O15444 150 aa9.04□□□□□ -0.96
CSGALNACT1-202ENST00000397998 LOXL3P58215 753 aa9.04□□□□□ -0.96
CSGALNACT1-202ENST00000397998 PLP1P60201 277 aa9.04□□□□□ -0.96
CSGALNACT1-202ENST00000397998 TMEM97Q5BJF2 176 aa9.04□□□□□ -0.96
CSGALNACT1-202ENST00000397998 TP53TG3Q9ULZ0 132 aa9.04□□□□□ -0.96
CSGALNACT1-202ENST00000397998 SOX21Q9Y651 276 aaPredicted RBP9.04□□□□□ -0.96
CSGALNACT1-202ENST00000397998 C7orf71A4D174 169 aa9.04□□□□□ -0.96
CSGALNACT1-202ENST00000397998 CD40P25942 277 aa9.04□□□□□ -0.96
CSGALNACT1-202ENST00000397998 C1orf185Q5T7R7 199 aa9.04□□□□□ -0.96
CSGALNACT1-202ENST00000397998 A1L4Q6 167 aa9.04□□□□□ -0.96
CSGALNACT1-202ENST00000397998 OR2T8A6NH00 312 aa9.04□□□□□ -0.96
CSGALNACT1-202ENST00000397998 FXYD7P58549 80 aa9.04□□□□□ -0.96
CSGALNACT1-202ENST00000397998 SRSF6Q13247 344 aaKnown RBP9.04□□□□□ -0.96
CSGALNACT1-202ENST00000397998 C17orf58Q2M2W7 97 aa9.04□□□□□ -0.96
CSGALNACT1-202ENST00000397998 TMEM30BQ3MIR4 351 aa9.04□□□□□ -0.96
CSGALNACT1-202ENST00000397998 COL25A1Q9BXS0 654 aaPredicted RBP9.04□□□□□ -0.96
CSGALNACT1-202ENST00000397998 MALRD1Q5VYJ5 2156 aa9.03□□□□□ -0.96
CSGALNACT1-202ENST00000397998 RPL11P62913 178 aaKnown RBP9.03□□□□□ -0.96
CSGALNACT1-202ENST00000397998 MORN5Q5VZ52 161 aa9.03□□□□□ -0.96
CSGALNACT1-202ENST00000397998 CHCHD1Q96BP2 118 aaKnown RBP9.03□□□□□ -0.96
CSGALNACT1-202ENST00000397998 PRELID3AQ96N28 172 aa9.03□□□□□ -0.96
CSGALNACT1-202ENST00000397998 EBLN2Q6P2I7 272 aa9.03□□□□□ -0.96
CSGALNACT1-202ENST00000397998 PET117Q6UWS5 81 aa9.03□□□□□ -0.96
CSGALNACT1-202ENST00000397998 ZNF414Q96IQ9 312 aa9.03□□□□□ -0.96
CSGALNACT1-202ENST00000397998 SLC25A15Q9Y619 301 aa9.03□□□□□ -0.96
CSGALNACT1-202ENST00000397998 TCRAP04437 139 aa9.03□□□□□ -0.96
CSGALNACT1-202ENST00000397998 SLC25A2Q9BXI2 301 aa9.03□□□□□ -0.96
CSGALNACT1-202ENST00000397998 PLSCR4Q9NRQ2 329 aa9.03□□□□□ -0.96
CSGALNACT1-202ENST00000397998 FNDC10F2Z333 226 aa9.02□□□□□ -0.97
CSGALNACT1-202ENST00000397998 CLEC3BP05452 202 aa9.02□□□□□ -0.97
CSGALNACT1-202ENST00000397998 FABP2P12104 132 aa9.02□□□□□ -0.97
CSGALNACT1-202ENST00000397998 SLC25A48Q6ZT89 311 aaKnown RBP9.02□□□□□ -0.97
CSGALNACT1-202ENST00000397998 RNASE8Q8TDE3 154 aaKnown RBP9.02□□□□□ -0.97
CSGALNACT1-202ENST00000397998 ATG2AQ2TAZ0 1938 aa9.02□□□□□ -0.97
CSGALNACT1-202ENST00000397998 PLXNB1O43157 2135 aa9.02□□□□□ -0.97
CSGALNACT1-202ENST00000397998 IGHV3OR16-8A0A075B7F1 116 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms