RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 OR10G9Q8NGN4 311 aa16.38■□□□□ 0.21
CPNE1-204ENST00000397443 OR10G7Q8NGN6 311 aa16.38■□□□□ 0.21
CPNE1-204ENST00000397443 A0A1B0GV50 99 aa16.37■□□□□ 0.21
CPNE1-204ENST00000397443 UMAD1C9J7I0 102 aa16.37■□□□□ 0.21
CPNE1-204ENST00000397443 SCGB2A1O75556 95 aa16.37■□□□□ 0.21
CPNE1-204ENST00000397443 ACOT6Q3I5F7 207 aaPredicted RBP16.37■□□□□ 0.21
CPNE1-204ENST00000397443 ZNF343Q6P1L6 599 aa16.37■□□□□ 0.21
CPNE1-204ENST00000397443 FAM122CQ6P4D5 195 aa16.37■□□□□ 0.21
CPNE1-204ENST00000397443 OR1B1Q8NGR6 318 aa16.37■□□□□ 0.21
CPNE1-204ENST00000397443 ATRQ13535 2644 aa16.37■□□□□ 0.21
CPNE1-204ENST00000397443 HMGB3O15347 200 aaKnown RBP16.37■□□□□ 0.21
CPNE1-204ENST00000397443 M6PRP20645 277 aa16.37■□□□□ 0.21
CPNE1-204ENST00000397443 RAB14P61106 215 aa16.37■□□□□ 0.21
CPNE1-204ENST00000397443 COMMD1Q8N668 190 aa16.37■□□□□ 0.21
CPNE1-204ENST00000397443 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.37■□□□□ 0.21
CPNE1-204ENST00000397443 SLC25A22Q9H936 323 aa16.37■□□□□ 0.21
CPNE1-204ENST00000397443 GAR1Q9NY12 217 aaKnown RBP16.37■□□□□ 0.21
CPNE1-204ENST00000397443 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.36■□□□□ 0.21
CPNE1-204ENST00000397443 CLPSL1A2RUU4 121 aa16.36■□□□□ 0.21
CPNE1-204ENST00000397443 OR5G3P0C626 314 aa16.36■□□□□ 0.21
CPNE1-204ENST00000397443 CD28P10747 220 aa16.36■□□□□ 0.21
CPNE1-204ENST00000397443 RPP25LQ8N5L8 163 aaKnown RBP16.36■□□□□ 0.21
CPNE1-204ENST00000397443 RNF152Q8N8N0 203 aa16.36■□□□□ 0.21
CPNE1-204ENST00000397443 PUS1Q9Y606 427 aaKnown RBP eCLIP16.36■□□□□ 0.21
CPNE1-204ENST00000397443 TOMM40O96008 361 aa16.35■□□□□ 0.21
CPNE1-204ENST00000397443 IL4P05112 153 aa16.35■□□□□ 0.21
CPNE1-204ENST00000397443 FABP1P07148 127 aa16.35■□□□□ 0.21
CPNE1-204ENST00000397443 OR51G1Q8NGK1 321 aa16.35■□□□□ 0.21
CPNE1-204ENST00000397443 MYOZ3Q8TDC0 251 aa16.35■□□□□ 0.21
CPNE1-204ENST00000397443 Q8WTZ3 238 aa16.35■□□□□ 0.21
CPNE1-204ENST00000397443 UHRF2Q96PU4 802 aa16.35■□□□□ 0.21
CPNE1-204ENST00000397443 A0A1W2PRX2 142 aa16.35■□□□□ 0.21
CPNE1-204ENST00000397443 TEX46H3BTG2 121 aa16.35■□□□□ 0.21
CPNE1-204ENST00000397443 COX7A2P2O60397 106 aa16.35■□□□□ 0.21
CPNE1-204ENST00000397443 OR2C1O95371 312 aa16.35■□□□□ 0.21
CPNE1-204ENST00000397443 MBP02144 154 aa16.35■□□□□ 0.21
CPNE1-204ENST00000397443 NMBP08949 121 aa16.35■□□□□ 0.21
CPNE1-204ENST00000397443 YPEL3P61236 119 aaPredicted RBP16.35■□□□□ 0.21
CPNE1-204ENST00000397443 SSX7Q7RTT5 188 aa16.35■□□□□ 0.21
CPNE1-204ENST00000397443 WIPF2Q8TF74 440 aaPredicted RBP16.35■□□□□ 0.21
CPNE1-204ENST00000397443 UBE2E2Q96LR5 201 aa16.35■□□□□ 0.21
CPNE1-204ENST00000397443 RAB5CP51148 216 aa16.34■□□□□ 0.21
CPNE1-204ENST00000397443 ZNF726P1Q15940 193 aa16.34■□□□□ 0.21
CPNE1-204ENST00000397443 SPATA31B1PQ5VZV4 182 aa16.34■□□□□ 0.21
CPNE1-204ENST00000397443 TMEM37Q8WXS4 190 aa16.34■□□□□ 0.21
CPNE1-204ENST00000397443 SEPSECSQ9HD40 501 aaKnown RBP16.34■□□□□ 0.21
CPNE1-204ENST00000397443 PEF1Q9UBV8 284 aaKnown RBP16.34■□□□□ 0.21
CPNE1-204ENST00000397443 PROK1P58294 105 aa16.33■□□□□ 0.21
CPNE1-204ENST00000397443 DEFB136Q30KP8 78 aa16.33■□□□□ 0.21
CPNE1-204ENST00000397443 LCN15Q6UWW0 184 aa16.33■□□□□ 0.21
CPNE1-204ENST00000397443 RCC1LQ96I51 464 aaKnown RBP16.33■□□□□ 0.21
CPNE1-204ENST00000397443 A0A1W2PPV4 95 aa16.33■□□□□ 0.2
CPNE1-204ENST00000397443 BMPR1BO00238 502 aa16.33■□□□□ 0.2
CPNE1-204ENST00000397443 PXDC1Q5TGL8 231 aa16.33■□□□□ 0.2
CPNE1-204ENST00000397443 FAM78BQ5VT40 261 aa16.33■□□□□ 0.2
CPNE1-204ENST00000397443 SPSB3Q6PJ21 355 aa16.33■□□□□ 0.2
CPNE1-204ENST00000397443 PATE2Q6UY27 113 aa16.33■□□□□ 0.2
CPNE1-204ENST00000397443 ZNF600Q6ZNG1 722 aa16.33■□□□□ 0.2
CPNE1-204ENST00000397443 RNF125Q96EQ8 232 aa16.33■□□□□ 0.2
CPNE1-204ENST00000397443 LGALS1P09382 135 aaKnown RBP16.32■□□□□ 0.2
CPNE1-204ENST00000397443 CDC34P49427 236 aaPredicted RBP16.32■□□□□ 0.2
CPNE1-204ENST00000397443 FGF8P55075 233 aaPredicted RBP16.32■□□□□ 0.2
CPNE1-204ENST00000397443 C10orf113Q5VZT2 155 aa16.32■□□□□ 0.2
CPNE1-204ENST00000397443 SFT2D1Q8WV19 159 aa16.32■□□□□ 0.2
CPNE1-204ENST00000397443 CITED2Q99967 270 aaPredicted RBP16.32■□□□□ 0.2
CPNE1-204ENST00000397443 HRH4Q9H3N8 390 aa16.32■□□□□ 0.2
CPNE1-204ENST00000397443 DNAJC4Q9NNZ3 241 aa16.32■□□□□ 0.2
CPNE1-204ENST00000397443 NUDT19A8MXV4 375 aa16.31■□□□□ 0.2
CPNE1-204ENST00000397443 HYPMO75409 117 aa16.31■□□□□ 0.2
CPNE1-204ENST00000397443 USF2Q15853 346 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-204ENST00000397443 TOMM20LQ6UXN7 152 aa16.31■□□□□ 0.2
CPNE1-204ENST00000397443 KLHL30-AS1Q8NEE0 82 aa16.31■□□□□ 0.2
CPNE1-204ENST00000397443 ZNF414Q96IQ9 312 aa16.31■□□□□ 0.2
CPNE1-204ENST00000397443 C20orf24Q9BUV8 137 aa16.31■□□□□ 0.2
CPNE1-204ENST00000397443 ACTR3CQ9C0K3 210 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-204ENST00000397443 H2AFB1P0C5Y9 115 aa16.31■□□□□ 0.2
CPNE1-204ENST00000397443 RELQ04864 619 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-204ENST00000397443 MORN5Q5VZ52 161 aa16.31■□□□□ 0.2
CPNE1-204ENST00000397443 MIR17HGQ75NE6 70 aa16.31■□□□□ 0.2
CPNE1-204ENST00000397443 RAB24Q969Q5 203 aa16.31■□□□□ 0.2
CPNE1-204ENST00000397443 ATP6V0BQ99437 205 aa16.31■□□□□ 0.2
CPNE1-204ENST00000397443 ZNF207O43670 478 aaKnown RBP16.3■□□□□ 0.2
CPNE1-204ENST00000397443 BLOC1S1P78537 153 aa16.3■□□□□ 0.2
CPNE1-204ENST00000397443 CLLU1Q5K131 121 aa16.3■□□□□ 0.2
CPNE1-204ENST00000397443 LINC00305Q7Z4B0 112 aa16.3■□□□□ 0.2
CPNE1-204ENST00000397443 OR1L4Q8NGR5 311 aa16.3■□□□□ 0.2
CPNE1-204ENST00000397443 LRRC20Q8TCA0 184 aa16.3■□□□□ 0.2
CPNE1-204ENST00000397443 DUX3Q96PT4 197 aa16.3■□□□□ 0.2
CPNE1-204ENST00000397443 IGHV4OR15-8A0A075B7B6 117 aa16.29■□□□□ 0.2
CPNE1-204ENST00000397443 A0A087WW49 117 aa16.29■□□□□ 0.2
CPNE1-204ENST00000397443 WI2-2373I1.2A0A1W2PRP0 233 aa16.29■□□□□ 0.2
CPNE1-204ENST00000397443 GGCTO75223 188 aaKnown RBP16.29■□□□□ 0.2
CPNE1-204ENST00000397443 CDX1P47902 265 aaPredicted RBP16.29■□□□□ 0.2
CPNE1-204ENST00000397443 RHOBP62745 196 aa16.29■□□□□ 0.2
CPNE1-204ENST00000397443 LEMD1Q68G75 181 aa16.29■□□□□ 0.2
CPNE1-204ENST00000397443 DPPA3Q6W0C5 159 aa16.29■□□□□ 0.2
CPNE1-204ENST00000397443 SAT2Q96F10 170 aaPredicted RBP16.29■□□□□ 0.2
CPNE1-204ENST00000397443 PFDN5Q99471 154 aa16.29■□□□□ 0.2
CPNE1-204ENST00000397443 HIGD1AQ9Y241 93 aa16.29■□□□□ 0.2
CPNE1-204ENST00000397443 TRAV5A0A0B4J249 113 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms