RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 A0A087WX48 190 aa8.55□□□□□ -1.04
COL4A6-203ENST00000394872 NPIPB5A8MRT5 1133 aa8.55□□□□□ -1.04
COL4A6-203ENST00000394872 F2Z2F3 143 aa8.55□□□□□ -1.04
COL4A6-203ENST00000394872 PSCAO43653 123 aa8.55□□□□□ -1.04
COL4A6-203ENST00000394872 ORMDL2Q53FV1 153 aa8.55□□□□□ -1.04
COL4A6-203ENST00000394872 TEX38Q6PEX7 206 aa8.55□□□□□ -1.04
COL4A6-203ENST00000394872 SLC25A48Q6ZT89 311 aaKnown RBP8.55□□□□□ -1.04
COL4A6-203ENST00000394872 IGKV1D-8A0A087WSZ0 117 aa8.55□□□□□ -1.04
COL4A6-203ENST00000394872 HBDP02042 147 aa8.55□□□□□ -1.04
COL4A6-203ENST00000394872 NDPQ00604 133 aa8.55□□□□□ -1.04
COL4A6-203ENST00000394872 TMEM95Q3KNT9 176 aa8.55□□□□□ -1.04
COL4A6-203ENST00000394872 MBD3L4A6NDZ8 208 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-203ENST00000394872 MBD3L3A6NE82 208 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-203ENST00000394872 MBD3L5A6NJ08 208 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-203ENST00000394872 DPM2O94777 84 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 COL8A2P25067 703 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 OR5A1Q8NGJ0 315 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 MBD3L2Q8NHZ7 208 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-203ENST00000394872 GAFA1Q96PS6 74 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 NEUROG3Q9Y4Z2 214 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 SBF1O95248 1867 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 TRIOBPQ9H2D6 2365 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 RIPPLY3P57055 190 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 SPSB3Q6PJ21 355 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 OSTCQ9NRP0 149 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 LTBP1Q14766 1721 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 TRAV2A0A0B4J234 112 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 PMS2P5A8MQ11 134 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 BUB1B-PAK6H3BSN5 160 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 CD5P06127 495 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 LINC00614P0C842 121 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 PAX2Q02962 417 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 PHLDA1Q8WV24 401 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-203ENST00000394872 BPESC1Q9GZL8 116 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 TRGV1A0A0A0MS02 117 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 PGPEP1LA6NFU8 196 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 SERF1AO75920 110 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 ZNF329Q86UD4 541 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 NR2C2APQ86WQ0 139 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 DERL1Q9BUN8 251 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 SCRT1Q9BWW7 348 aa8.54□□□□□ -1.04
COL4A6-203ENST00000394872 SLC25A39Q9BZJ4 359 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-203ENST00000394872 IGHV3-53P01767 116 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 PSG1P11464 419 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 MST1P26927 711 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 CKS1BP61024 79 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 Q6ZS92 163 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 RNF114Q9Y508 228 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 IGHV3-64A0A075B6Q5 118 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 IGKV1-27A0A075B6S5 117 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 RNF223E7ERA6 249 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 J3QRE1 110 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 PSPNO60542 156 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 LY6HO94772 140 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 CLPSP04118 112 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 TDGF1P3P51864 188 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 PPBPP02775 128 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 RNF5Q99942 180 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 TMEM8BA6NDV4 472 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 C5orf64Q2M2E5 130 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 NRN1Q9NPD7 142 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 LINC00158P58513 81 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 SPCS1Q9Y6A9 102 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 DOCK6Q96HP0 2047 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 H0YJW9 148 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 EXOC3-AS1Q8N2X6 119 aa8.53□□□□□ -1.04
COL4A6-203ENST00000394872 RNF166Q96A37 237 aaPredicted RBP8.53□□□□□ -1.04
COL4A6-203ENST00000394872 A0A1B0GWJ7 208 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 FCN3O75636 299 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 BTCP35070 178 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 ZNF124Q15973 351 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 OCC1Q8TAD7 63 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 WFDC1Q9HC57 220 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 CLDN16Q9Y5I7 305 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 CACNA1IQ9P0X4 2223 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 A0A0U1RRA0 63 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 ID3Q02535 119 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 S100A7L2Q5SY68 101 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 USMG5Q96IX5 58 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 CA1P00915 261 aaPredicted RBP8.52□□□□□ -1.05
COL4A6-203ENST00000394872 KLF17Q5JT82 389 aaPredicted RBP8.52□□□□□ -1.05
COL4A6-203ENST00000394872 LYPD2Q6UXB3 125 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 DTX1Q86Y01 620 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 TMEM86BQ8N661 226 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 UBE2E2Q96LR5 201 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 FAM223BA6NKX1 122 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 GZMBP10144 247 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 TREML4Q6UXN2 200 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 C1QL4Q86Z23 238 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 FAM223AQ8IWN6 122 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 TMEM170AQ8WVE7 144 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 IGKCP01834 107 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 PRDM13Q9H4Q3 707 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 VSIRQ9H7M9 311 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 WDR83OSQ9Y284 106 aa8.52□□□□□ -1.05
COL4A6-203ENST00000394872 GAS1P54826 345 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 ZNF318Q5VUA4 2279 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 SRRM4A7MD48 611 aaKnown RBP8.51□□□□□ -1.05
COL4A6-203ENST00000394872 MAJINQ3KP22 176 aa8.51□□□□□ -1.05
COL4A6-203ENST00000394872 PRR30Q53SZ7 412 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms