RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 FABP5P3A8MUU1 101 aa6.56□□□□□ -1.36
ATXN3-203ENST00000393287 IGHV4-39P01824 125 aa6.56□□□□□ -1.36
ATXN3-203ENST00000393287 ELOBQ15370 118 aa6.56□□□□□ -1.36
ATXN3-203ENST00000393287 TMEM219Q86XT9 240 aa6.56□□□□□ -1.36
ATXN3-203ENST00000393287 COL4A2P08572 1712 aa6.56□□□□□ -1.36
ATXN3-203ENST00000393287 POU2AF1Q16633 256 aa6.56□□□□□ -1.36
ATXN3-203ENST00000393287 C7orf77A4D0Y5 90 aa6.56□□□□□ -1.36
ATXN3-203ENST00000393287 OR11H12B2RN74 326 aa6.56□□□□□ -1.36
ATXN3-203ENST00000393287 SMIM12Q96EX1 92 aa6.56□□□□□ -1.36
ATXN3-203ENST00000393287 RPP21Q9H633 154 aaKnown RBP6.56□□□□□ -1.36
ATXN3-203ENST00000393287 LYL1P12980 280 aa6.56□□□□□ -1.36
ATXN3-203ENST00000393287 CKS2P33552 79 aa6.56□□□□□ -1.36
ATXN3-203ENST00000393287 FOXE3Q13461 319 aa6.56□□□□□ -1.36
ATXN3-203ENST00000393287 RUSC1-AS1Q66K80 236 aa6.56□□□□□ -1.36
ATXN3-203ENST00000393287 NPBQ8NG41 125 aa6.56□□□□□ -1.36
ATXN3-203ENST00000393287 ADAMTS9Q9P2N4 1935 aa6.56□□□□□ -1.36
ATXN3-203ENST00000393287 ZNF56Q15929 161 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 TMEM249Q2WGJ8 235 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 C1QL4Q86Z23 238 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 MBD3L1Q8WWY6 194 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 SFRP2Q96HF1 295 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 TMEM14BQ9NUH8 114 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 A0A1B0GW64 132 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 HBBP68871 147 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 RSPO1Q2MKA7 263 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-203ENST00000393287 PET117Q6UWS5 81 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 MIR17HGQ75NE6 70 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 NEU1Q99519 415 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 TNFRSF18Q9Y5U5 241 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 F2Z2F3 143 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 ZNF253O75346 499 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 LY6HO94772 140 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 INSP01308 110 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 HS3ST6Q96QI5 342 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 PRDM13Q9H4Q3 707 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 EPDR1Q9UM22 224 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 RNASE4P34096 147 aaKnown RBP6.55□□□□□ -1.36
ATXN3-203ENST00000393287 LRRK1Q38SD2 2015 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 LINC00473A8K010 186 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 A8MXK9 166 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 APOC4P55056 127 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 CENPWQ5EE01 88 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 TREML4Q6UXN2 200 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 LCNL1Q6ZST4 164 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 GSX1Q9H4S2 264 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-203ENST00000393287 NDUFA4L2Q9NRX3 87 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 TRAV1-1A0A0B4J248 108 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 PRSS1P07477 247 aa6.55□□□□□ -1.36
ATXN3-203ENST00000393287 RNASE2P10153 161 aaKnown RBP6.55□□□□□ -1.36
ATXN3-203ENST00000393287 RPL15P61313 204 aaKnown RBP6.55□□□□□ -1.36
ATXN3-203ENST00000393287 MRPL54Q6P161 138 aaKnown RBP6.55□□□□□ -1.36
ATXN3-203ENST00000393287 IGKV1-5P01602 117 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 IER3P46695 156 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 KRTDAPP60985 99 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 SLC25A39Q9BZJ4 359 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-203ENST00000393287 CGB1A6NKQ9 187 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 TCL1AP56279 114 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 TMEM183BQ1AE95 376 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 PARLQ9H300 379 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 LY96Q9Y6Y9 160 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 HIVEP2P31629 2446 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 TMSB15BA0A087X1C1 80 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 MFAP2P55001 183 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 CCL20P78556 96 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 ZNF705AQ6ZN79 300 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-203ENST00000393287 C11orf53Q8IXP5 236 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 IMMP2LQ96T52 175 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 ARID1AO14497 2285 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 ATP6V0E1O15342 81 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 NMBP08949 121 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 ZNF415Q09FC8 603 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 C1orf147Q96MC9 270 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-203ENST00000393287 VAMP8Q9BV40 100 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 RNF126Q9BV68 326 aa6.54□□□□□ -1.36
ATXN3-203ENST00000393287 TMEM37Q8WXS4 190 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 MRPL27Q9P0M9 148 aaKnown RBP6.53□□□□□ -1.36
ATXN3-203ENST00000393287 CSPG4Q6UVK1 2322 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 ZNF207O43670 478 aaKnown RBP6.53□□□□□ -1.36
ATXN3-203ENST00000393287 CD24P25063 80 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 IL36BQ9NZH7 164 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 CADP27708 2225 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 A0A087WWC5 75 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 CD5LO43866 347 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 RFNGQ9Y644 331 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 ZGRF1Q86YA3 2104 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 TEX48A0A1B0GUV7 120 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 RNF222A6NCQ9 220 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 FAM24BQ8N5W8 94 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 FER1L6-AS1Q8NA97 138 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 PRADC1Q9BSG0 188 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 SRD5A3Q9H8P0 318 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 PLXND1Q9Y4D7 1925 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 ZNF114Q8NC26 417 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 PGLYRP4Q96LB8 373 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 SHANK2-AS3Q9BTD1 123 aa6.53□□□□□ -1.36
ATXN3-203ENST00000393287 IGHV3-66A0A0C4DH42 116 aa6.52□□□□□ -1.36
ATXN3-203ENST00000393287 HOXA3O43365 443 aaPredicted RBP6.52□□□□□ -1.36
ATXN3-203ENST00000393287 SPINK4O60575 86 aa6.52□□□□□ -1.36
ATXN3-203ENST00000393287 STAG3L2P0CL84 134 aa6.52□□□□□ -1.36
ATXN3-203ENST00000393287 STAG3L3P0CL85 134 aa6.52□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms