RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 BLNKQ8WV28 456 aa20.27■□□□□ 0.84
SMARCD3-203ENST00000392811 OSTCQ9NRP0 149 aa20.27■□□□□ 0.84
SMARCD3-203ENST00000392811 MINOS1-NBL1R4GNA1 71 aa20.27■□□□□ 0.84
SMARCD3-203ENST00000392811 CNN1P51911 297 aaKnown RBP20.27■□□□□ 0.84
SMARCD3-203ENST00000392811 HIST1H2BLQ99880 126 aa20.27■□□□□ 0.84
SMARCD3-203ENST00000392811 PKD1L2Q7Z442 2459 aa20.26■□□□□ 0.83
SMARCD3-203ENST00000392811 MGST1P10620 155 aaKnown RBP20.26■□□□□ 0.83
SMARCD3-203ENST00000392811 GP9P14770 177 aa20.26■□□□□ 0.83
SMARCD3-203ENST00000392811 LYZP61626 148 aa20.26■□□□□ 0.83
SMARCD3-203ENST00000392811 LEMD1Q68G75 181 aa20.26■□□□□ 0.83
SMARCD3-203ENST00000392811 RASL11BQ9BPW5 248 aa20.26■□□□□ 0.83
SMARCD3-203ENST00000392811 HIGD1AQ9Y241 93 aa20.26■□□□□ 0.83
SMARCD3-203ENST00000392811 IGHV2-70DA0A0C4DH43 119 aa20.26■□□□□ 0.83
SMARCD3-203ENST00000392811 IGKV1-17P01599 117 aa20.26■□□□□ 0.83
SMARCD3-203ENST00000392811 Q8N6K4 173 aa20.26■□□□□ 0.83
SMARCD3-203ENST00000392811 ISLRO14498 428 aa20.25■□□□□ 0.83
SMARCD3-203ENST00000392811 NBEAP1P0C6P0 100 aa20.25■□□□□ 0.83
SMARCD3-203ENST00000392811 NHLRC2Q8NBF2 726 aa20.25■□□□□ 0.83
SMARCD3-203ENST00000392811 OR1L6Q8NGR2 347 aa20.25■□□□□ 0.83
SMARCD3-203ENST00000392811 BPESC1Q9GZL8 116 aa20.25■□□□□ 0.83
SMARCD3-203ENST00000392811 PDLIM4P50479 330 aa20.24■□□□□ 0.83
SMARCD3-203ENST00000392811 YPEL3P61236 119 aaPredicted RBP20.24■□□□□ 0.83
SMARCD3-203ENST00000392811 GNG5P63218 68 aa20.24■□□□□ 0.83
SMARCD3-203ENST00000392811 KLF17Q5JT82 389 aaPredicted RBP20.24■□□□□ 0.83
SMARCD3-203ENST00000392811 TRAV34A0A0B4J273 112 aa20.24■□□□□ 0.83
SMARCD3-203ENST00000392811 NCBP2LA6PVI3 153 aaKnown RBP20.24■□□□□ 0.83
SMARCD3-203ENST00000392811 TOX4O94842 621 aa20.24■□□□□ 0.83
SMARCD3-203ENST00000392811 LMO4P61968 165 aa20.24■□□□□ 0.83
SMARCD3-203ENST00000392811 CX3CL1P78423 397 aa20.24■□□□□ 0.83
SMARCD3-203ENST00000392811 GSN-AS1Q9NRJ2 163 aa20.24■□□□□ 0.83
SMARCD3-203ENST00000392811 ABCA1O95477 2261 aa20.23■□□□□ 0.83
SMARCD3-203ENST00000392811 EBI3Q14213 229 aa20.23■□□□□ 0.83
SMARCD3-203ENST00000392811 ASPHD1Q5U4P2 390 aa20.23■□□□□ 0.83
SMARCD3-203ENST00000392811 ZNF562Q6V9R5 426 aa20.23■□□□□ 0.83
SMARCD3-203ENST00000392811 PIEZO1Q92508 2521 aa20.23■□□□□ 0.83
SMARCD3-203ENST00000392811 PACRGQ96M98 296 aaPredicted RBP20.23■□□□□ 0.83
SMARCD3-203ENST00000392811 RBM14Q96PK6 669 aaKnown RBP20.23■□□□□ 0.83
SMARCD3-203ENST00000392811 RD3LP0DJH9 198 aa20.22■□□□□ 0.83
SMARCD3-203ENST00000392811 HIST1H1BP16401 226 aaKnown RBP20.22■□□□□ 0.83
SMARCD3-203ENST00000392811 IBA57Q5T440 356 aaKnown RBP20.22■□□□□ 0.83
SMARCD3-203ENST00000392811 OR8I2Q8N0Y5 310 aa20.22■□□□□ 0.83
SMARCD3-203ENST00000392811 ARPC1AQ92747 370 aa20.22■□□□□ 0.83
SMARCD3-203ENST00000392811 EPDR1Q9UM22 224 aa20.22■□□□□ 0.83
SMARCD3-203ENST00000392811 CACNA1AO00555 2505 aa20.22■□□□□ 0.83
SMARCD3-203ENST00000392811 PGPA6NDG6 321 aa20.22■□□□□ 0.83
SMARCD3-203ENST00000392811 SLC25A5P05141 298 aaKnown RBP20.22■□□□□ 0.83
SMARCD3-203ENST00000392811 FABP1P07148 127 aa20.22■□□□□ 0.83
SMARCD3-203ENST00000392811 NDPQ00604 133 aa20.22■□□□□ 0.83
SMARCD3-203ENST00000392811 TBX15Q96SF7 602 aa20.22■□□□□ 0.83
SMARCD3-203ENST00000392811 SLC25A39Q9BZJ4 359 aaPredicted RBP20.22■□□□□ 0.83
SMARCD3-203ENST00000392811 OVOL3O00110 214 aa20.21■□□□□ 0.83
SMARCD3-203ENST00000392811 CBLN1P23435 193 aa20.21■□□□□ 0.83
SMARCD3-203ENST00000392811 NPIPB5A8MRT5 1133 aa20.2■□□□□ 0.83
SMARCD3-203ENST00000392811 H3BTX0 84 aa20.2■□□□□ 0.83
SMARCD3-203ENST00000392811 AMBPP02760 352 aa20.2■□□□□ 0.83
SMARCD3-203ENST00000392811 TMEM11P17152 192 aa20.2■□□□□ 0.83
SMARCD3-203ENST00000392811 ZNF600Q6ZNG1 722 aa20.2■□□□□ 0.83
SMARCD3-203ENST00000392811 BAGE2Q86Y30 109 aa20.2■□□□□ 0.83
SMARCD3-203ENST00000392811 ADMP35318 185 aa20.2■□□□□ 0.82
SMARCD3-203ENST00000392811 CDPF1Q6NVV7 123 aa20.2■□□□□ 0.82
SMARCD3-203ENST00000392811 MRPL27Q9P0M9 148 aaKnown RBP20.2■□□□□ 0.82
SMARCD3-203ENST00000392811 TBL2Q9Y4P3 447 aaKnown RBP20.2■□□□□ 0.82
SMARCD3-203ENST00000392811 WNK2Q9Y3S1 2297 aa20.19■□□□□ 0.82
SMARCD3-203ENST00000392811 FRMD6-AS1P0C7T7 363 aa20.19■□□□□ 0.82
SMARCD3-203ENST00000392811 UBE2E1P51965 193 aa20.19■□□□□ 0.82
SMARCD3-203ENST00000392811 FANCD2OSQ96PS1 177 aa20.19■□□□□ 0.82
SMARCD3-203ENST00000392811 IGLV11-55A0A075B6I3 123 aa20.19■□□□□ 0.82
SMARCD3-203ENST00000392811 TMEM183BQ1AE95 376 aa20.19■□□□□ 0.82
SMARCD3-203ENST00000392811 AJUBAQ96IF1 538 aa20.19■□□□□ 0.82
SMARCD3-203ENST00000392811 SERTAD4Q9NUC0 356 aa20.19■□□□□ 0.82
SMARCD3-203ENST00000392811 S4R3C0 116 aa20.19■□□□□ 0.82
SMARCD3-203ENST00000392811 IGHV4-39P01824 125 aa20.17■□□□□ 0.82
SMARCD3-203ENST00000392811 IER3P46695 156 aa20.17■□□□□ 0.82
SMARCD3-203ENST00000392811 TCL1AP56279 114 aa20.17■□□□□ 0.82
SMARCD3-203ENST00000392811 TTC9CQ8N5M4 171 aa20.17■□□□□ 0.82
SMARCD3-203ENST00000392811 Q9H3A6 140 aa20.17■□□□□ 0.82
SMARCD3-203ENST00000392811 TMEM14CQ9P0S9 112 aa20.17■□□□□ 0.82
SMARCD3-203ENST00000392811 RPH3ALQ9UNE2 315 aa20.17■□□□□ 0.82
SMARCD3-203ENST00000392811 UBE2G1P62253 170 aa20.17■□□□□ 0.82
SMARCD3-203ENST00000392811 FAM120AOSQ5T036 256 aa20.17■□□□□ 0.82
SMARCD3-203ENST00000392811 MRPL18Q9H0U6 180 aaKnown RBP20.17■□□□□ 0.82
SMARCD3-203ENST00000392811 KLF12Q9Y4X4 402 aa20.17■□□□□ 0.82
SMARCD3-203ENST00000392811 MED13LQ71F56 2210 aa20.17■□□□□ 0.82
SMARCD3-203ENST00000392811 ZNF705GA8MUZ8 300 aaPredicted RBP20.16■□□□□ 0.82
SMARCD3-203ENST00000392811 TOMM40O96008 361 aa20.16■□□□□ 0.82
SMARCD3-203ENST00000392811 C5orf17Q8NAS9 161 aa20.16■□□□□ 0.82
SMARCD3-203ENST00000392811 SMIM27A0A1W2PRY6 76 aa20.15■□□□□ 0.82
SMARCD3-203ENST00000392811 TMEM8BA6NDV4 472 aa20.15■□□□□ 0.82
SMARCD3-203ENST00000392811 SGK494Q96LW2 274 aa20.15■□□□□ 0.82
SMARCD3-203ENST00000392811 ATG101Q9BSB4 218 aa20.15■□□□□ 0.82
SMARCD3-203ENST00000392811 ZNF586Q9NXT0 402 aa20.15■□□□□ 0.82
SMARCD3-203ENST00000392811 SPINK4O60575 86 aa20.15■□□□□ 0.82
SMARCD3-203ENST00000392811 FAM106CPP0CH98 169 aa20.15■□□□□ 0.82
SMARCD3-203ENST00000392811 FAM231DQ6ZW35 169 aa20.15■□□□□ 0.82
SMARCD3-203ENST00000392811 ZNF491Q8N8L2 437 aa20.15■□□□□ 0.82
SMARCD3-203ENST00000392811 FAM168AQ92567 244 aa20.15■□□□□ 0.82
SMARCD3-203ENST00000392811 SHANK2-AS3Q9BTD1 123 aa20.15■□□□□ 0.82
SMARCD3-203ENST00000392811 CA1P00915 261 aaPredicted RBP20.14■□□□□ 0.81
SMARCD3-203ENST00000392811 HIST1H1EP10412 219 aaKnown RBP20.14■□□□□ 0.81
SMARCD3-203ENST00000392811 SAA4P35542 130 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms