RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 HYPMO75409 117 aa11.94□□□□□ -0.5
SCFD2-201ENST00000388940 MOSP00540 346 aa11.94□□□□□ -0.5
SCFD2-201ENST00000388940 LIPFP07098 398 aa11.94□□□□□ -0.5
SCFD2-201ENST00000388940 GRNP28799 593 aaKnown RBP11.94□□□□□ -0.5
SCFD2-201ENST00000388940 TPPP2P59282 170 aa11.94□□□□□ -0.5
SCFD2-201ENST00000388940 TMEM183BQ1AE95 376 aa11.94□□□□□ -0.5
SCFD2-201ENST00000388940 BAGE2Q86Y30 109 aa11.94□□□□□ -0.5
SCFD2-201ENST00000388940 OR1B1Q8NGR6 318 aa11.94□□□□□ -0.5
SCFD2-201ENST00000388940 SMIM12Q96EX1 92 aa11.94□□□□□ -0.5
SCFD2-201ENST00000388940 LINC00479Q96M42 142 aa11.94□□□□□ -0.5
SCFD2-201ENST00000388940 MS4A10Q96PG2 267 aa11.94□□□□□ -0.5
SCFD2-201ENST00000388940 PTPRQQ9UMZ3 2332 aa11.94□□□□□ -0.5
SCFD2-201ENST00000388940 AMY1AP04745 511 aa11.93□□□□□ -0.5
SCFD2-201ENST00000388940 ORM2P19652 201 aa11.93□□□□□ -0.5
SCFD2-201ENST00000388940 CHRDL1Q9BU40 450 aa11.93□□□□□ -0.5
SCFD2-201ENST00000388940 EPDR1Q9UM22 224 aa11.93□□□□□ -0.5
SCFD2-201ENST00000388940 KLF12Q9Y4X4 402 aa11.93□□□□□ -0.5
SCFD2-201ENST00000388940 PTPRZ1P23471 2315 aaPredicted RBP11.93□□□□□ -0.5
SCFD2-201ENST00000388940 COX7A1P24310 79 aa11.92□□□□□ -0.5
SCFD2-201ENST00000388940 RASL11AQ6T310 242 aa11.92□□□□□ -0.5
SCFD2-201ENST00000388940 FBXL15Q9H469 300 aa11.92□□□□□ -0.5
SCFD2-201ENST00000388940 NAT8BQ9UHF3 227 aa11.92□□□□□ -0.5
SCFD2-201ENST00000388940 SERF1AO75920 110 aa11.92□□□□□ -0.5
SCFD2-201ENST00000388940 HLA-DQA1P01909 254 aa11.92□□□□□ -0.5
SCFD2-201ENST00000388940 NBEAP1P0C6P0 100 aa11.92□□□□□ -0.5
SCFD2-201ENST00000388940 KLRB1Q12918 225 aa11.92□□□□□ -0.5
SCFD2-201ENST00000388940 SRSF12Q8WXF0 261 aaKnown RBP11.92□□□□□ -0.5
SCFD2-201ENST00000388940 GRAMD2BQ96HH9 432 aa11.92□□□□□ -0.5
SCFD2-201ENST00000388940 RAB1BQ9H0U4 201 aa11.92□□□□□ -0.5
SCFD2-201ENST00000388940 SERTAD4Q9NUC0 356 aa11.92□□□□□ -0.5
SCFD2-201ENST00000388940 OR10J3Q5JRS4 329 aa11.91□□□□□ -0.5
SCFD2-201ENST00000388940 TPTE2P1Q5T6R2 138 aa11.91□□□□□ -0.5
SCFD2-201ENST00000388940 OR11H6Q8NGC7 330 aa11.91□□□□□ -0.5
SCFD2-201ENST00000388940 WIPF2Q8TF74 440 aaPredicted RBP11.91□□□□□ -0.5
SCFD2-201ENST00000388940 C7orf69Q9H7B7 122 aa11.91□□□□□ -0.5
SCFD2-201ENST00000388940 NAGKQ9UJ70 344 aa11.91□□□□□ -0.5
SCFD2-201ENST00000388940 SMG1Q96Q15 3661 aaKnown RBP11.91□□□□□ -0.5
SCFD2-201ENST00000388940 I3L2K1 104 aa11.91□□□□□ -0.5
SCFD2-201ENST00000388940 SCGB1D1O95968 90 aa11.91□□□□□ -0.5
SCFD2-201ENST00000388940 GP9P14770 177 aa11.91□□□□□ -0.5
SCFD2-201ENST00000388940 PRB3Q04118 309 aaPredicted RBP11.91□□□□□ -0.5
SCFD2-201ENST00000388940 C19orf35Q6ZS72 473 aa11.91□□□□□ -0.5
SCFD2-201ENST00000388940 BAGE3Q86Y29 109 aa11.91□□□□□ -0.5
SCFD2-201ENST00000388940 NHLRC2Q8NBF2 726 aa11.91□□□□□ -0.5
SCFD2-201ENST00000388940 NUDT10Q8NFP7 164 aa11.91□□□□□ -0.5
SCFD2-201ENST00000388940 NUDT11Q96G61 164 aa11.91□□□□□ -0.5
SCFD2-201ENST00000388940 CHTOPQ9Y3Y2 248 aaKnown RBP11.91□□□□□ -0.5
SCFD2-201ENST00000388940 DMXL2Q8TDJ6 3036 aa11.9□□□□□ -0.5
SCFD2-201ENST00000388940 PGPA6NDG6 321 aa11.9□□□□□ -0.5
SCFD2-201ENST00000388940 IGLC1P0CG04 106 aa11.9□□□□□ -0.5
SCFD2-201ENST00000388940 TCL1AP56279 114 aa11.9□□□□□ -0.5
SCFD2-201ENST00000388940 ADORA2A-AS1P86434 159 aa11.9□□□□□ -0.5
SCFD2-201ENST00000388940 DMRTA1Q5VZB9 504 aa11.9□□□□□ -0.5
SCFD2-201ENST00000388940 FAM168AQ92567 244 aa11.9□□□□□ -0.5
SCFD2-201ENST00000388940 COL25A1Q9BXS0 654 aaPredicted RBP11.9□□□□□ -0.5
SCFD2-201ENST00000388940 TRAV34A0A0B4J273 112 aa11.9□□□□□ -0.51
SCFD2-201ENST00000388940 SLC25A5P05141 298 aaKnown RBP11.9□□□□□ -0.51
SCFD2-201ENST00000388940 APELAP0DMC3 54 aa11.9□□□□□ -0.51
SCFD2-201ENST00000388940 RBX1P62877 108 aa11.9□□□□□ -0.51
SCFD2-201ENST00000388940 TIMD4Q96H15 378 aa11.9□□□□□ -0.51
SCFD2-201ENST00000388940 GNB4Q9HAV0 340 aa11.9□□□□□ -0.51
SCFD2-201ENST00000388940 CBLN4Q9NTU7 201 aa11.9□□□□□ -0.51
SCFD2-201ENST00000388940 ONECUT1Q9UBC0 465 aa11.9□□□□□ -0.51
SCFD2-201ENST00000388940 TMEM238LA0A1B0GVL6 79 aa11.89□□□□□ -0.51
SCFD2-201ENST00000388940 SPINK4O60575 86 aa11.89□□□□□ -0.51
SCFD2-201ENST00000388940 HTR1DP28221 377 aa11.89□□□□□ -0.51
SCFD2-201ENST00000388940 UBE2G1P62253 170 aa11.89□□□□□ -0.51
SCFD2-201ENST00000388940 GNG5P63218 68 aa11.89□□□□□ -0.51
SCFD2-201ENST00000388940 C5orf17Q8NAS9 161 aa11.89□□□□□ -0.51
SCFD2-201ENST00000388940 TMEM190Q8WZ59 177 aa11.89□□□□□ -0.51
SCFD2-201ENST00000388940 TMEM14CQ9P0S9 112 aa11.89□□□□□ -0.51
SCFD2-201ENST00000388940 DPM3Q9P2X0 92 aa11.89□□□□□ -0.51
SCFD2-201ENST00000388940 HIGD1AQ9Y241 93 aa11.89□□□□□ -0.51
SCFD2-201ENST00000388940 SPTBN2O15020 2390 aa11.89□□□□□ -0.51
SCFD2-201ENST00000388940 IGHV3-21A0A0B4J1V1 117 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 M0R1W7 72 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 TIMM23O14925 209 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 HIST1H1EP10412 219 aaKnown RBP11.88□□□□□ -0.51
SCFD2-201ENST00000388940 TMEM11P17152 192 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 CDKN1BP46527 198 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 SLC35B1P78383 322 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 LDLRAD2Q5SZI1 272 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 C1orf194Q5T5A4 169 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 C11orf71Q6IPW1 123 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 MRPL54Q6P161 138 aaKnown RBP11.88□□□□□ -0.51
SCFD2-201ENST00000388940 Q6ZWC4 215 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 BLNKQ8WV28 456 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 GPR82Q96P67 336 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 MLST8Q9BVC4 326 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 ZNF331Q9NQX6 463 aaPredicted RBP11.88□□□□□ -0.51
SCFD2-201ENST00000388940 TLN1Q9Y490 2541 aaKnown RBP11.88□□□□□ -0.51
SCFD2-201ENST00000388940 TOMM40O96008 361 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 PSG1P11464 419 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 BRS3P32247 399 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 PLGLAQ15195 96 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 CDSNQ15517 529 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 NPBQ8NG41 125 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 TSKUQ8WUA8 353 aa11.88□□□□□ -0.51
SCFD2-201ENST00000388940 NEU4Q8WWR8 484 aaPredicted RBP11.88□□□□□ -0.51
SCFD2-201ENST00000388940 CFHR4Q92496 578 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms