RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 HOXA5P20719 270 aa10.78□□□□□ -0.68
NPHP4-203ENST00000378169 CEACAM8P31997 349 aaPredicted RBP10.78□□□□□ -0.68
NPHP4-203ENST00000378169 TRIOO75962 3097 aa10.78□□□□□ -0.68
NPHP4-203ENST00000378169 A0A1W2PRE2 83 aa10.78□□□□□ -0.68
NPHP4-203ENST00000378169 IGLV1-44P01699 117 aa10.78□□□□□ -0.68
NPHP4-203ENST00000378169 DDTP30046 118 aa10.78□□□□□ -0.68
NPHP4-203ENST00000378169 RHOGP84095 191 aa10.78□□□□□ -0.68
NPHP4-203ENST00000378169 EBLN2Q6P2I7 272 aa10.78□□□□□ -0.68
NPHP4-203ENST00000378169 CENPVQ7Z7K6 275 aaPredicted RBP10.78□□□□□ -0.68
NPHP4-203ENST00000378169 KLK15Q9H2R5 256 aa10.78□□□□□ -0.68
NPHP4-203ENST00000378169 PHLDA3Q9Y5J5 127 aa10.78□□□□□ -0.68
NPHP4-203ENST00000378169 IGHV3OR16-12A0A075B7B8 117 aa10.77□□□□□ -0.68
NPHP4-203ENST00000378169 IFITM10A6NMD0 228 aa10.77□□□□□ -0.68
NPHP4-203ENST00000378169 PSG1P11464 419 aa10.77□□□□□ -0.68
NPHP4-203ENST00000378169 GFI1BQ5VTD9 330 aa10.77□□□□□ -0.68
NPHP4-203ENST00000378169 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.77□□□□□ -0.69
NPHP4-203ENST00000378169 NMUP48645 174 aa10.77□□□□□ -0.69
NPHP4-203ENST00000378169 ZNF134P52741 427 aa10.77□□□□□ -0.69
NPHP4-203ENST00000378169 TMEM167AQ8TBQ9 72 aa10.77□□□□□ -0.69
NPHP4-203ENST00000378169 TNFRSF14Q92956 283 aa10.77□□□□□ -0.69
NPHP4-203ENST00000378169 HIVEP3Q5T1R4 2406 aa10.77□□□□□ -0.69
NPHP4-203ENST00000378169 TAS2R60P59551 318 aa10.77□□□□□ -0.69
NPHP4-203ENST00000378169 EPDR1Q9UM22 224 aa10.77□□□□□ -0.69
NPHP4-203ENST00000378169 CBY3A6NI87 242 aa10.76□□□□□ -0.69
NPHP4-203ENST00000378169 FAM209BQ5JX69 171 aa10.76□□□□□ -0.69
NPHP4-203ENST00000378169 SAPCD1Q5SSQ6 148 aa10.76□□□□□ -0.69
NPHP4-203ENST00000378169 UNQ6494/PRO21346Q6UXR6 183 aa10.76□□□□□ -0.69
NPHP4-203ENST00000378169 BRD3OSQ6XYD6 125 aa10.76□□□□□ -0.69
NPHP4-203ENST00000378169 LINC01551Q86U37 167 aa10.76□□□□□ -0.69
NPHP4-203ENST00000378169 SSC4DQ8WTU2 575 aa10.76□□□□□ -0.69
NPHP4-203ENST00000378169 KCNS1Q96KK3 526 aa10.76□□□□□ -0.69
NPHP4-203ENST00000378169 RAB9AP51151 201 aa10.76□□□□□ -0.69
NPHP4-203ENST00000378169 OR4C5Q8NGB2 326 aa10.76□□□□□ -0.69
NPHP4-203ENST00000378169 MYOZ3Q8TDC0 251 aa10.76□□□□□ -0.69
NPHP4-203ENST00000378169 SPRY4Q9C004 299 aa10.76□□□□□ -0.69
NPHP4-203ENST00000378169 PMS2P5A8MQ11 134 aa10.76□□□□□ -0.69
NPHP4-203ENST00000378169 SOD3P08294 240 aa10.76□□□□□ -0.69
NPHP4-203ENST00000378169 SPATA45Q537H7 98 aa10.76□□□□□ -0.69
NPHP4-203ENST00000378169 SCGB1D4Q6XE38 83 aa10.76□□□□□ -0.69
NPHP4-203ENST00000378169 USP9YO00507 2555 aaPredicted RBP10.75□□□□□ -0.69
NPHP4-203ENST00000378169 PTPRSQ13332 1948 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 TCF15Q12870 199 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 TMEM136Q6ZRR5 245 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 VMO1Q7Z5L0 202 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 SCRT1Q9BWW7 348 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 DKK4Q9UBT3 224 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 SIGLEC9Q9Y336 463 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 A0A1B0GUT8 65 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 BUB1B-PAK6H3BSN5 160 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 SERF1AO75920 110 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 FAM74A4Q5TZK3 123 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 EXOC3-AS1Q8N2X6 119 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 RPP21Q9H633 154 aaKnown RBP10.75□□□□□ -0.69
NPHP4-203ENST00000378169 AP5S1Q9NUS5 200 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 TBL2Q9Y4P3 447 aaKnown RBP10.75□□□□□ -0.69
NPHP4-203ENST00000378169 EML6Q6ZMW3 1958 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 TRBV9A0A0B4J1U6 114 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 M0R381 172 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 ZNF25P17030 456 aaPredicted RBP10.75□□□□□ -0.69
NPHP4-203ENST00000378169 EFNA4P52798 201 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 C19orf35Q6ZS72 473 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 ATG101Q9BSB4 218 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 BPESC1Q9GZL8 116 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 XIRP2A4UGR9 3374 aa10.75□□□□□ -0.69
NPHP4-203ENST00000378169 RNASE2P10153 161 aaKnown RBP10.74□□□□□ -0.69
NPHP4-203ENST00000378169 IL15RAQ13261 267 aa10.74□□□□□ -0.69
NPHP4-203ENST00000378169 VPS25Q9BRG1 176 aa10.74□□□□□ -0.69
NPHP4-203ENST00000378169 HINT1P49773 126 aaPredicted RBP10.74□□□□□ -0.69
NPHP4-203ENST00000378169 Q1RN00 199 aa10.74□□□□□ -0.69
NPHP4-203ENST00000378169 TPTE2P1Q5T6R2 138 aa10.74□□□□□ -0.69
NPHP4-203ENST00000378169 ZNF600Q6ZNG1 722 aa10.74□□□□□ -0.69
NPHP4-203ENST00000378169 ST6GALNAC3Q8NDV1 305 aa10.74□□□□□ -0.69
NPHP4-203ENST00000378169 PRO3102Q9H379 93 aa10.74□□□□□ -0.69
NPHP4-203ENST00000378169 C17orf58Q2M2W7 97 aa10.74□□□□□ -0.69
NPHP4-203ENST00000378169 FAM90A2PQ658T7 463 aa10.74□□□□□ -0.69
NPHP4-203ENST00000378169 ARHGAP21Q5T5U3 1957 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 IGLV3-9A0A075B6K5 115 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 TMEM97Q5BJF2 176 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 TRAV8-1A0A0A6YYK1 113 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 C15orf65H3BRN8 121 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 ADMP35318 185 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 SPRNQ5BIV9 151 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 C11orf53Q8IXP5 236 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 Q8NFD4 153 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 LINC00479Q96M42 142 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 GSN-AS1Q9NRJ2 163 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 TRBV24-1A0A075B6N3 115 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 PLXNB1O43157 2135 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 GATA4P43694 442 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 C15orf32Q32M92 178 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 GLMPQ8WWB7 406 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 C18orf15Q96N68 181 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 USP9XQ93008 2570 aaPredicted RBP10.73□□□□□ -0.69
NPHP4-203ENST00000378169 A0A1W2PPI3 338 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 OR4C46A6NHA9 309 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 FOLR2P14207 255 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 PPIFP30405 207 aaKnown RBP10.73□□□□□ -0.69
NPHP4-203ENST00000378169 DMRT1Q9Y5R6 373 aa10.73□□□□□ -0.69
NPHP4-203ENST00000378169 TRBV20OR9-2A0A075B6H5 130 aa10.72□□□□□ -0.69
NPHP4-203ENST00000378169 CNTFRP26992 372 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms