RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 YAE1D1Q9NRH1 226 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 LSM4Q9Y4Z0 139 aaKnown RBP6.66□□□□□ -1.34
UBR4-202ENST00000375224 PXMP4Q9Y6I8 212 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 SPENQ96T58 3664 aaKnown RBP6.66□□□□□ -1.34
UBR4-202ENST00000375224 ROS1P08922 2347 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 PPIAL4CA0A0B4J2A2 164 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 SRRM4A7MD48 611 aaKnown RBP6.66□□□□□ -1.34
UBR4-202ENST00000375224 GPR6P46095 362 aaPredicted RBP6.66□□□□□ -1.34
UBR4-202ENST00000375224 HSD52Q0P140 79 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 VMA21Q3ZAQ7 101 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 Q8N7P7 452 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 TIMD4Q96H15 378 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 MGST2Q99735 147 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 GGTLC1Q9BX51 225 aa6.66□□□□□ -1.34
UBR4-202ENST00000375224 SPTBN4Q9H254 2564 aa6.65□□□□□ -1.34
UBR4-202ENST00000375224 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.65□□□□□ -1.34
UBR4-202ENST00000375224 IGHV2-26A0A0B4J1V2 119 aa6.65□□□□□ -1.34
UBR4-202ENST00000375224 A0A1B0GUS0 222 aa6.65□□□□□ -1.34
UBR4-202ENST00000375224 GRIFINA4D1Z8 144 aa6.65□□□□□ -1.34
UBR4-202ENST00000375224 COL8A2P25067 703 aa6.65□□□□□ -1.34
UBR4-202ENST00000375224 OR8B3Q8NGG8 313 aa6.65□□□□□ -1.34
UBR4-202ENST00000375224 NEU4Q8WWR8 484 aaPredicted RBP6.65□□□□□ -1.34
UBR4-202ENST00000375224 OR8B2Q96RD0 313 aa6.65□□□□□ -1.34
UBR4-202ENST00000375224 FAM110AQ9BQ89 295 aa6.65□□□□□ -1.34
UBR4-202ENST00000375224 PYGO2Q9BRQ0 406 aa6.65□□□□□ -1.34
UBR4-202ENST00000375224 ZNF253O75346 499 aa6.65□□□□□ -1.35
UBR4-202ENST00000375224 NUDT3O95989 172 aa6.65□□□□□ -1.35
UBR4-202ENST00000375224 GRNP28799 593 aaKnown RBP6.65□□□□□ -1.35
UBR4-202ENST00000375224 SUB1P53999 127 aaKnown RBP eCLIP6.65□□□□□ -1.353e-8■■■□□ 18.4
UBR4-202ENST00000375224 TCTEX1D4Q5JR98 221 aa6.65□□□□□ -1.35
UBR4-202ENST00000375224 SMIM20Q8N5G0 67 aa6.65□□□□□ -1.35
UBR4-202ENST00000375224 ZNRD1Q9P1U0 126 aa6.65□□□□□ -1.35
UBR4-202ENST00000375224 AMMECR1Q9Y4X0 333 aaPredicted RBP6.65□□□□□ -1.35
UBR4-202ENST00000375224 OR11H12B2RN74 326 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 CXorf1O96002 111 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 AMTP48728 403 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 RHOBP62745 196 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 OR11H1Q8NG94 326 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 OR11H2Q8NH07 326 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 C8orf46Q8TAG6 207 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 ANAPC16Q96DE5 110 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 WNT10AQ9GZT5 417 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 NDUFA4L2Q9NRX3 87 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 PKDREJQ9NTG1 2253 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 HMGB3O15347 200 aaKnown RBP6.64□□□□□ -1.35
UBR4-202ENST00000375224 SMIM17P0DL12 118 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 SRP14P37108 136 aaKnown RBP6.64□□□□□ -1.35
UBR4-202ENST00000375224 MIC13Q5XKP0 118 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 CYP2G1PQ6ZSU1 146 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 OR4F5Q8NH21 305 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 OR4F4Q96R69 305 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 CLEC7AQ9BXN2 247 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 PRORYQ9H606 182 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 BOD1L1Q8NFC6 3051 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 TAX1BP3O14907 124 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 SIVA1O15304 175 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 NUPR1O60356 82 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 REG1BP48304 166 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 PMCHL1Q16048 86 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 MPV17L2Q567V2 206 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 ZNF841Q6ZN19 808 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 C19orf24Q9BVV8 132 aa6.64□□□□□ -1.35
UBR4-202ENST00000375224 PAGE4O60829 102 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 SERF1AO75920 110 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 IGLC1P0CG04 106 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 RNASE2P10153 161 aaKnown RBP6.63□□□□□ -1.35
UBR4-202ENST00000375224 LCN2P80188 198 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 COX19Q49B96 90 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 FAM78BQ5VT40 261 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 SPTA1P02549 2419 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 GAGE12HA6NDE8 117 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 C11orf94C9JXX5 98 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 SLC17A3O00476 420 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 HLA-DRB5Q30154 266 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 CD300EQ496F6 205 aaPredicted RBP6.63□□□□□ -1.35
UBR4-202ENST00000375224 ATOH7Q8N100 152 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 STPG3Q8N7X2 389 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 TEX45Q8NA69 505 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 EAF1Q96JC9 268 aaPredicted RBP6.63□□□□□ -1.35
UBR4-202ENST00000375224 PIEZO1Q92508 2521 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 LYNX1G3V0Z9 82 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 LYNX1P0DP58 116 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 MYOD1P15172 320 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 PMCHP20382 165 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 CTRLP40313 264 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 CD69Q07108 199 aa6.63□□□□□ -1.35
UBR4-202ENST00000375224 TPRP12270 2363 aaKnown RBP6.63□□□□□ -1.35
UBR4-202ENST00000375224 BSNQ9UPA5 3926 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 VENTXO95231 258 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 IGLV1-47P01700 117 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 C1QTNF9P0C862 333 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 ID1P41134 155 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 MMD2Q8IY49 270 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 SSMEM1Q8WWF3 244 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 FNDC4Q9H6D8 234 aaPredicted RBP6.62□□□□□ -1.35
UBR4-202ENST00000375224 INSIG2Q9Y5U4 225 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 ENSAO43768 121 aaKnown RBP6.62□□□□□ -1.35
UBR4-202ENST00000375224 IGLV2-23P01705 113 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 PRR20EP86478 221 aa6.62□□□□□ -1.35
UBR4-202ENST00000375224 PRR20CP86479 221 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms