RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 ATP5L2Q7Z4Y8 100 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 ZNF441Q8N8Z8 693 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 DLX4Q92988 240 aaPredicted RBP6.36□□□□□ -1.39
USP48-203ENST00000374732 TRAPPC1Q9Y5R8 145 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 PRRC2BQ5JSZ5 2229 aaKnown RBP6.35□□□□□ -1.39
USP48-203ENST00000374732 TCRAP04437 139 aa6.35□□□□□ -1.39
USP48-203ENST00000374732 SUB1P53999 127 aaKnown RBP eCLIP6.35□□□□□ -1.392e-6■■■■□ 20.7
USP48-203ENST00000374732 CSRP2Q16527 193 aa6.35□□□□□ -1.39
USP48-203ENST00000374732 RPL7L1Q6DKI1 246 aaKnown RBP6.35□□□□□ -1.39
USP48-203ENST00000374732 TCF23Q7RTU1 214 aa6.35□□□□□ -1.39
USP48-203ENST00000374732 BAGE3Q86Y29 109 aa6.35□□□□□ -1.39
USP48-203ENST00000374732 BAGE2Q86Y30 109 aa6.35□□□□□ -1.39
USP48-203ENST00000374732 OR2A5Q96R48 311 aa6.35□□□□□ -1.39
USP48-203ENST00000374732 DYSFO75923 2080 aa6.35□□□□□ -1.39
USP48-203ENST00000374732 MYO7AQ13402 2215 aa6.35□□□□□ -1.39
USP48-203ENST00000374732 LRP4O75096 1905 aa6.35□□□□□ -1.39
USP48-203ENST00000374732 HEATR5AQ86XA9 2040 aa6.35□□□□□ -1.39
USP48-203ENST00000374732 KNCNA6PVL3 124 aa6.35□□□□□ -1.39
USP48-203ENST00000374732 H3BMG7 143 aa6.35□□□□□ -1.39
USP48-203ENST00000374732 LINC00310P59036 64 aa6.35□□□□□ -1.39
USP48-203ENST00000374732 TMEM258P61165 79 aa6.35□□□□□ -1.39
USP48-203ENST00000374732 ZNF493Q6ZR52 646 aa6.35□□□□□ -1.39
USP48-203ENST00000374732 RBMXL1Q96E39 390 aaKnown RBP6.35□□□□□ -1.39
USP48-203ENST00000374732 CACNG5Q9UF02 275 aa6.35□□□□□ -1.39
USP48-203ENST00000374732 DOCK9Q9BZ29 2069 aa6.35□□□□□ -1.39
USP48-203ENST00000374732 C8orf87E5RJ46 101 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 SMKR1H3BMG3 65 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 SRP19P09132 144 aaKnown RBP6.34□□□□□ -1.39
USP48-203ENST00000374732 PAPPA-AS1Q5QFB9 102 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 WFDC6Q9BQY6 131 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 PLA2G2EQ9NZK7 142 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 TP53TG3Q9ULZ0 132 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 HHLA3Q9XRX5 114 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 LOC107986453A0A1B0GWG9 222 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 PLAC8L1A1L4L8 177 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 A8MWV9 139 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 SYS1-DBNDD2H3BUS1 97 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 PITX3O75364 302 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 IGLV3-19P01714 112 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 TRACP01848 142 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 HLA-DRB1P01911 266 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 PLGLB1Q02325 96 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 ARFRP1Q13795 201 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 PLK5Q496M5 336 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 SPRNQ5BIV9 151 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 TRAPPC6BQ86SZ2 158 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 NFE4Q86UQ8 179 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 FBXL14Q8N1E6 418 aa6.34□□□□□ -1.39
USP48-203ENST00000374732 SHISA9B4DS77 424 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 M0R2P5 195 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 INAFM2P0DMQ5 153 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 CFPP27918 469 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 TMEM105Q8N8V8 129 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 SUMF1Q8NBK3 374 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 SLC39A9Q9NUM3 307 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 PXMP4Q9Y6I8 212 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 MDC1Q14676 2089 aaKnown RBP6.33□□□□□ -1.4
USP48-203ENST00000374732 A8MWL6 223 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 HAX1O00165 279 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 ATP1B1P05026 303 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 RTL8BQ17RB0 113 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 SMIM4Q8WVI0 70 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 Q96M66 194 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 FANCD2OSQ96PS1 177 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 RTL8AQ9BWD3 113 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 TNFRSF19Q9NS68 423 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 CHD9Q3L8U1 2897 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 ZNF688P0C7X2 276 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 ASPHD1Q5U4P2 390 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 SLC25A45Q8N413 288 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 APCDD1LQ8NCL9 501 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 OR2T10Q8NGZ9 312 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 CSAG2Q9Y5P2 127 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 CHD7Q9P2D1 2997 aa6.33□□□□□ -1.4
USP48-203ENST00000374732 PRH1P02810 166 aa6.32□□□□□ -1.4
USP48-203ENST00000374732 LCN10Q6JVE6 187 aa6.32□□□□□ -1.4
USP48-203ENST00000374732 C20orf204Q6ZNR8 217 aa6.32□□□□□ -1.4
USP48-203ENST00000374732 C17orf77Q96MU5 243 aa6.32□□□□□ -1.4
USP48-203ENST00000374732 GPX7Q96SL4 187 aaPredicted RBP6.32□□□□□ -1.4
USP48-203ENST00000374732 AAMDCQ9H7C9 122 aa6.32□□□□□ -1.4
USP48-203ENST00000374732 HCFC1P51610 2035 aa6.32□□□□□ -1.4
USP48-203ENST00000374732 C2CD4DB7Z1M9 353 aa6.32□□□□□ -1.4
USP48-203ENST00000374732 IGHV3-7P01780 117 aa6.32□□□□□ -1.4
USP48-203ENST00000374732 CRISP2P16562 243 aa6.32□□□□□ -1.4
USP48-203ENST00000374732 SFTPA2Q8IWL1 248 aa6.32□□□□□ -1.4
USP48-203ENST00000374732 BCL6BQ8N143 479 aaPredicted RBP6.32□□□□□ -1.4
USP48-203ENST00000374732 OR51H1Q8NH63 302 aa6.32□□□□□ -1.4
USP48-203ENST00000374732 PPDPFLQ8WWR9 84 aa6.32□□□□□ -1.4
USP48-203ENST00000374732 AQP3Q92482 292 aa6.32□□□□□ -1.4
USP48-203ENST00000374732 ARL2-SNX15V9GYD0 113 aa6.32□□□□□ -1.4
USP48-203ENST00000374732 KIAA1549Q9HCM3 1950 aa6.32□□□□□ -1.4
USP48-203ENST00000374732 HSPB1P04792 205 aaKnown RBP6.31□□□□□ -1.4
USP48-203ENST00000374732 VSIG8P0DPA2 414 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 RRN3P1Q2M238 152 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 Q56UQ5 140 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 FXYD5Q96DB9 178 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 TRANK1O15050 2925 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 H0YGG7 62 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 TIMM23O14925 209 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 STATHP02808 62 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms