RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 KLF13Q9Y2Y9 288 aaPredicted RBP7.76□□□□□ -1.17
SF3A3-201ENST00000373019 F11RQ9Y624 299 aaKnown RBP7.76□□□□□ -1.17
SF3A3-201ENST00000373019 A0A1W2PR77 199 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 CSN3P07498 182 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 FAM106CPP0CH98 169 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 KIR2DL2P43627 348 aaPredicted RBP7.75□□□□□ -1.17
SF3A3-201ENST00000373019 ZNF137PP52743 207 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 FAM106AQ4KMX7 169 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 MOB1BQ7L9L4 216 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 PCSK5Q92824 1860 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 K7EMI3 77 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 SSBP2P81877 361 aaPredicted RBP7.75□□□□□ -1.17
SF3A3-201ENST00000373019 CATR1Q13166 79 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 AMTNQ6UX39 209 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 BCL6BQ8N143 479 aaPredicted RBP7.75□□□□□ -1.17
SF3A3-201ENST00000373019 SYT8Q8NBV8 401 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 Q8TCH9 128 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 PRDM14Q9GZV8 571 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 CYSLTR1Q9Y271 337 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 IGKV1OR2-108A0A075B7D4 117 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 MORN5Q5VZ52 161 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 Q6ZUT4 128 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 FADS6Q8N9I5 356 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 WDR31Q8NA23 367 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 PLEKHA3Q9HB20 300 aa7.75□□□□□ -1.17
SF3A3-201ENST00000373019 TRAV3A0A0B4J244 114 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 LMO7DNF2Z398 122 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 OVOL3O00110 214 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 ZNF883P0CG24 379 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.74□□□□□ -1.17
SF3A3-201ENST00000373019 TNFRSF18Q9Y5U5 241 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 OR2H2O95918 312 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 LTAP01374 205 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 SP1P08047 785 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 NHLRC4P0CG21 123 aaPredicted RBP7.74□□□□□ -1.17
SF3A3-201ENST00000373019 GCSHP23434 173 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 RPL32P62910 135 aaKnown RBP7.74□□□□□ -1.17
SF3A3-201ENST00000373019 PLA2G2CQ5R387 149 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 PRSS22Q9GZN4 317 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 CHRNA10Q9GZZ6 450 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 HIF1ANQ9NWT6 349 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 AMMECR1Q9Y4X0 333 aaPredicted RBP7.74□□□□□ -1.17
SF3A3-201ENST00000373019 IGLL5B9A064 214 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 CCL2P13500 99 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 DUTP33316 252 aaKnown RBP7.74□□□□□ -1.17
SF3A3-201ENST00000373019 LOXL1Q08397 574 aaPredicted RBP7.74□□□□□ -1.17
SF3A3-201ENST00000373019 FOXI1Q12951 378 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 SRSF6Q13247 344 aaKnown RBP7.74□□□□□ -1.17
SF3A3-201ENST00000373019 VKORC1L1Q8N0U8 176 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 PGLYRP4Q96LB8 373 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 AP5S1Q9NUS5 200 aa7.74□□□□□ -1.17
SF3A3-201ENST00000373019 TEX50A0A1B0GTY4 177 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 ZNF716A6NP11 495 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 APOHP02749 345 aaPredicted RBP7.73□□□□□ -1.17
SF3A3-201ENST00000373019 KLRD1Q13241 179 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 PEAR1Q5VY43 1037 aaPredicted RBP7.73□□□□□ -1.17
SF3A3-201ENST00000373019 OSR1Q8TAX0 266 aaPredicted RBP7.73□□□□□ -1.17
SF3A3-201ENST00000373019 ZNF502Q8TBZ5 544 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 SRXN1Q9BYN0 137 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 UFC1Q9Y3C8 167 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 DYSFO75923 2080 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 TCRBV4S1A1TA0A5B7 111 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 PROP1O75360 226 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 NMUP48645 174 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 LGALS9BQ3B8N2 356 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 LGALS9CQ6DKI2 356 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 MOB3BQ86TA1 216 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 NFE4Q86UQ8 179 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 FAM167A-AS1Q96KT0 104 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 FOXB1Q99853 325 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 CITED1Q99966 193 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 SLC25A33Q9BSK2 321 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 CEP192Q8TEP8 1941 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 CNIH1O95406 144 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 CT45A6P0DMU7 189 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 CT45A5P0DMU8 189 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 CT45A7P0DMV0 189 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 ACP1P24666 158 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 GPR12P47775 334 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 ZNF146Q15072 292 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 GAGE13Q4V321 117 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 CT45A1Q5HYN5 189 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 SMIM20Q8N5G0 67 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 OR8A1Q8NGG7 326 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 CT45A3Q8NHU0 189 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 TTTY13Q9BZ97 58 aa7.73□□□□□ -1.17
SF3A3-201ENST00000373019 TRAV5A0A0B4J249 113 aa7.72□□□□□ -1.17
SF3A3-201ENST00000373019 FAM90A9PA6NNJ1 464 aa7.72□□□□□ -1.17
SF3A3-201ENST00000373019 C12orf77C9JDV5 145 aa7.72□□□□□ -1.17
SF3A3-201ENST00000373019 NPIPB6E9PJ23 425 aa7.72□□□□□ -1.17
SF3A3-201ENST00000373019 FKBP2P26885 142 aaKnown RBP7.72□□□□□ -1.17
SF3A3-201ENST00000373019 PPIFP30405 207 aaKnown RBP7.72□□□□□ -1.17
SF3A3-201ENST00000373019 NHP2Q9NX24 153 aaKnown RBP7.72□□□□□ -1.17
SF3A3-201ENST00000373019 HEATR1Q9H583 2144 aaKnown RBP7.72□□□□□ -1.17
SF3A3-201ENST00000373019 SRRM4A7MD48 611 aaKnown RBP7.72□□□□□ -1.17
SF3A3-201ENST00000373019 ZNF329Q86UD4 541 aa7.72□□□□□ -1.17
SF3A3-201ENST00000373019 SGK494Q96LW2 274 aa7.72□□□□□ -1.17
SF3A3-201ENST00000373019 ANAPC13Q9BS18 74 aa7.72□□□□□ -1.17
SF3A3-201ENST00000373019 SLC25A2Q9BXI2 301 aa7.72□□□□□ -1.17
SF3A3-201ENST00000373019 C1QTNF4Q9BXJ3 329 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms