RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ADMP35318 185 aa11.86□□□□□ -0.51
LMO4-201ENST00000370542 RAB7AP51149 207 aa11.86□□□□□ -0.51
LMO4-201ENST00000370542 LGALS4P56470 323 aa11.86□□□□□ -0.51
LMO4-201ENST00000370542 RPS20P60866 119 aaKnown RBP11.86□□□□□ -0.51
LMO4-201ENST00000370542 SUMO1P63165 101 aaKnown RBP11.86□□□□□ -0.51
LMO4-201ENST00000370542 COTL1Q14019 142 aa11.86□□□□□ -0.51
LMO4-201ENST00000370542 OR8G2PQ6IF36 304 aa11.86□□□□□ -0.51
LMO4-201ENST00000370542 C19orf35Q6ZS72 473 aa11.86□□□□□ -0.51
LMO4-201ENST00000370542 BAGE3Q86Y29 109 aa11.86□□□□□ -0.51
LMO4-201ENST00000370542 BAGE2Q86Y30 109 aa11.86□□□□□ -0.51
LMO4-201ENST00000370542 OR2T6Q8NHC8 308 aa11.86□□□□□ -0.51
LMO4-201ENST00000370542 FAM110DQ8TAY7 271 aaPredicted RBP11.86□□□□□ -0.51
LMO4-201ENST00000370542 UHRF2Q96PU4 802 aa11.86□□□□□ -0.51
LMO4-201ENST00000370542 SAMD10Q9BYL1 202 aa11.86□□□□□ -0.51
LMO4-201ENST00000370542 NPFFR1Q9GZQ6 430 aa11.86□□□□□ -0.51
LMO4-201ENST00000370542 ZNF702PQ9H963 129 aa11.86□□□□□ -0.51
LMO4-201ENST00000370542 SERTAD4Q9NUC0 356 aa11.86□□□□□ -0.51
LMO4-201ENST00000370542 TCF19Q9Y242 345 aa11.86□□□□□ -0.51
LMO4-201ENST00000370542 A6NDX4 124 aa11.85□□□□□ -0.51
LMO4-201ENST00000370542 PMS2P5A8MQ11 134 aa11.85□□□□□ -0.51
LMO4-201ENST00000370542 NPSP0C0P6 89 aa11.85□□□□□ -0.51
LMO4-201ENST00000370542 P0C879 139 aa11.85□□□□□ -0.51
LMO4-201ENST00000370542 OPRK1P41145 380 aa11.85□□□□□ -0.51
LMO4-201ENST00000370542 GNB1P62873 340 aa11.85□□□□□ -0.51
LMO4-201ENST00000370542 ZNF90Q03938 601 aa11.85□□□□□ -0.51
LMO4-201ENST00000370542 ZNF146Q15072 292 aa11.85□□□□□ -0.51
LMO4-201ENST00000370542 Q6ZWC4 215 aa11.85□□□□□ -0.51
LMO4-201ENST00000370542 BATF2Q8N1L9 274 aa11.85□□□□□ -0.51
LMO4-201ENST00000370542 TMEM256Q8N2U0 113 aa11.85□□□□□ -0.51
LMO4-201ENST00000370542 ZNF645Q8N7E2 425 aa11.85□□□□□ -0.51
LMO4-201ENST00000370542 DTD1Q8TEA8 209 aa11.85□□□□□ -0.51
LMO4-201ENST00000370542 HSPB9Q9BQS6 159 aa11.85□□□□□ -0.51
LMO4-201ENST00000370542 WDR83OSQ9Y284 106 aa11.85□□□□□ -0.51
LMO4-201ENST00000370542 EPPK1P58107 5090 aaKnown RBP11.85□□□□□ -0.51
LMO4-201ENST00000370542 OR5G3P0C626 314 aa11.84□□□□□ -0.51
LMO4-201ENST00000370542 OR10J4P0C629 311 aa11.84□□□□□ -0.51
LMO4-201ENST00000370542 COX7A1P24310 79 aa11.84□□□□□ -0.51
LMO4-201ENST00000370542 OR5I1Q13606 314 aa11.84□□□□□ -0.51
LMO4-201ENST00000370542 PMCHL1Q16048 86 aa11.84□□□□□ -0.51
LMO4-201ENST00000370542 BEAN1Q3B7T3 259 aa11.84□□□□□ -0.51
LMO4-201ENST00000370542 SAMD5Q5TGI4 173 aa11.84□□□□□ -0.51
LMO4-201ENST00000370542 PRR18Q8N4B5 295 aa11.84□□□□□ -0.51
LMO4-201ENST00000370542 C11orf52Q96A22 123 aa11.84□□□□□ -0.51
LMO4-201ENST00000370542 ZNF714Q96N38 554 aa11.84□□□□□ -0.51
LMO4-201ENST00000370542 QTRT1Q9BXR0 403 aaKnown RBP11.84□□□□□ -0.51
LMO4-201ENST00000370542 WNT10AQ9GZT5 417 aa11.84□□□□□ -0.51
LMO4-201ENST00000370542 MRPL18Q9H0U6 180 aaKnown RBP11.84□□□□□ -0.51
LMO4-201ENST00000370542 MBNL3Q9NUK0 354 aaKnown RBP11.84□□□□□ -0.51
LMO4-201ENST00000370542 MRPS16Q9Y3D3 137 aaKnown RBP11.84□□□□□ -0.51
LMO4-201ENST00000370542 LINC00312Q9Y6C7 94 aa11.84□□□□□ -0.51
LMO4-201ENST00000370542 TRAV24A0A0B4J272 114 aa11.83□□□□□ -0.52
LMO4-201ENST00000370542 hADV38S2A0JD32 116 aa11.83□□□□□ -0.52
LMO4-201ENST00000370542 PSPNO60542 156 aa11.83□□□□□ -0.52
LMO4-201ENST00000370542 ZNF253O75346 499 aa11.83□□□□□ -0.52
LMO4-201ENST00000370542 AREGP15514 252 aa11.83□□□□□ -0.52
LMO4-201ENST00000370542 RPEL1Q2QD12 228 aa11.83□□□□□ -0.52
LMO4-201ENST00000370542 FAM162BQ5T6X4 162 aa11.83□□□□□ -0.52
LMO4-201ENST00000370542 MINOS1Q5TGZ0 78 aa11.83□□□□□ -0.52
LMO4-201ENST00000370542 LEMD1Q68G75 181 aa11.83□□□□□ -0.52
LMO4-201ENST00000370542 ZNF497Q6ZNH5 498 aa11.83□□□□□ -0.52
LMO4-201ENST00000370542 MINOS1-NBL1R4GNA1 71 aa11.83□□□□□ -0.52
LMO4-201ENST00000370542 TRGV10A0A0A0MS01 117 aa11.82□□□□□ -0.52
LMO4-201ENST00000370542 K7EP13 123 aa11.82□□□□□ -0.52
LMO4-201ENST00000370542 NDUFB4O95168 129 aa11.82□□□□□ -0.52
LMO4-201ENST00000370542 HAND1O96004 215 aa11.82□□□□□ -0.52
LMO4-201ENST00000370542 IGLV2-14P01704 120 aa11.82□□□□□ -0.52
LMO4-201ENST00000370542 HLA-DRB5Q30154 266 aa11.82□□□□□ -0.52
LMO4-201ENST00000370542 RASL11AQ6T310 242 aa11.82□□□□□ -0.52
LMO4-201ENST00000370542 DRAM1Q8N682 238 aa11.82□□□□□ -0.52
LMO4-201ENST00000370542 OR1L6Q8NGR2 347 aa11.82□□□□□ -0.52
LMO4-201ENST00000370542 IL36RNQ9UBH0 155 aa11.82□□□□□ -0.52
LMO4-201ENST00000370542 TRAPPC2LQ9UL33 140 aa11.82□□□□□ -0.52
LMO4-201ENST00000370542 ADARB2-AS1A8MUL3 147 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 DIRC3C9JPN6 131 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 MGST3O14880 152 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 SERF1AO75920 110 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 TOMM40O96008 361 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 STAG3L2P0CL84 134 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 STAG3L3P0CL85 134 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 NPPCP23582 126 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 CTRLP40313 264 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 HNRNPA3P51991 378 aaKnown RBP11.81□□□□□ -0.52
LMO4-201ENST00000370542 EDDM3BP56851 147 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 HTD2P86397 168 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 RTL8BQ17RB0 113 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 AARDQ4LEZ3 155 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 MORN2Q502X0 79 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 DMRTA1Q5VZB9 504 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 H2BFWTQ7Z2G1 175 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 OR52E5Q8NH55 327 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 CORO2AQ92828 525 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 DNAJC4Q9NNZ3 241 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 BET1LQ9NYM9 111 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 PAM16Q9Y3D7 125 aa11.81□□□□□ -0.52
LMO4-201ENST00000370542 KIAA2026Q5HYC2 2103 aa11.8□□□□□ -0.52
LMO4-201ENST00000370542 IGHV2-26A0A0B4J1V2 119 aa11.8□□□□□ -0.52
LMO4-201ENST00000370542 A0A1W2PN81 502 aa11.8□□□□□ -0.52
LMO4-201ENST00000370542 G3V4G9 280 aa11.8□□□□□ -0.52
LMO4-201ENST00000370542 SIRPB1O00241 398 aa11.8□□□□□ -0.52
LMO4-201ENST00000370542 SH2D1BO14796 132 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms