RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 A0A1B0GUS0 222 aa14.9□□□□□ -0.02
CHRNA4-201ENST00000370263 PRR7Q8TB68 274 aa14.9□□□□□ -0.02
CHRNA4-201ENST00000370263 CNTFRP26992 372 aa14.9□□□□□ -0.02
CHRNA4-201ENST00000370263 TRAV12-3A0A0B4J271 114 aa14.9□□□□□ -0.02
CHRNA4-201ENST00000370263 C5orf63A6NC05 138 aa14.9□□□□□ -0.02
CHRNA4-201ENST00000370263 EFEMP2O95967 443 aa14.9□□□□□ -0.02
CHRNA4-201ENST00000370263 CD300EQ496F6 205 aaPredicted RBP14.9□□□□□ -0.02
CHRNA4-201ENST00000370263 LINC01549A6NIU2 74 aa14.89□□□□□ -0.03
CHRNA4-201ENST00000370263 IGLC2P0DOY2 106 aa14.89□□□□□ -0.03
CHRNA4-201ENST00000370263 IGLC3P0DOY3 106 aa14.89□□□□□ -0.03
CHRNA4-201ENST00000370263 TMEM42Q69YG0 159 aa14.89□□□□□ -0.03
CHRNA4-201ENST00000370263 VWCEQ96DN2 955 aa14.89□□□□□ -0.03
CHRNA4-201ENST00000370263 GREB1Q4ZG55 1949 aa14.89□□□□□ -0.03
CHRNA4-201ENST00000370263 LOC102723996A0A087X1L8 192 aa14.89□□□□□ -0.03
CHRNA4-201ENST00000370263 NCR2O95944 276 aa14.89□□□□□ -0.03
CHRNA4-201ENST00000370263 IGLV3-19P01714 112 aa14.89□□□□□ -0.03
CHRNA4-201ENST00000370263 PRTN3P24158 256 aa14.89□□□□□ -0.03
CHRNA4-201ENST00000370263 CLEC19AQ6UXS0 136 aa14.89□□□□□ -0.03
CHRNA4-201ENST00000370263 ADAMTSL5Q6ZMM2 481 aa14.89□□□□□ -0.03
CHRNA4-201ENST00000370263 LTBP4Q8N2S1 1624 aa14.88□□□□□ -0.03
CHRNA4-201ENST00000370263 FHL1Q13642 323 aa14.88□□□□□ -0.03
CHRNA4-201ENST00000370263 Q6ZRM9 215 aa14.88□□□□□ -0.03
CHRNA4-201ENST00000370263 C15orf62A8K5M9 175 aa14.88□□□□□ -0.03
CHRNA4-201ENST00000370263 KLF2Q9Y5W3 355 aaPredicted RBP14.88□□□□□ -0.03
CHRNA4-201ENST00000370263 NBR2O15453 112 aa14.88□□□□□ -0.03
CHRNA4-201ENST00000370263 LY6EQ16553 131 aa14.88□□□□□ -0.03
CHRNA4-201ENST00000370263 C5orf24Q7Z6I8 188 aa14.88□□□□□ -0.03
CHRNA4-201ENST00000370263 KLHDC3Q9BQ90 382 aa14.88□□□□□ -0.03
CHRNA4-201ENST00000370263 SMAD7O15105 426 aaKnown RBP14.88□□□□□ -0.03
CHRNA4-201ENST00000370263 APOBEC3AP31941 199 aaPredicted RBP14.88□□□□□ -0.03
CHRNA4-201ENST00000370263 PSG3Q16557 428 aa14.88□□□□□ -0.03
CHRNA4-201ENST00000370263 LCTP09848 1927 aa14.88□□□□□ -0.03
CHRNA4-201ENST00000370263 CEP290O15078 2479 aa14.88□□□□□ -0.03
CHRNA4-201ENST00000370263 MPDZO75970 2070 aa14.87□□□□□ -0.03
CHRNA4-201ENST00000370263 NPIPB5A8MRT5 1133 aa14.87□□□□□ -0.03
CHRNA4-201ENST00000370263 LYZL1Q6UWQ5 148 aa14.87□□□□□ -0.03
CHRNA4-201ENST00000370263 PLXNA1Q9UIW2 1896 aa14.87□□□□□ -0.03
CHRNA4-201ENST00000370263 CLEC2AQ6UVW9 174 aa14.87□□□□□ -0.03
CHRNA4-201ENST00000370263 TRAV21A0A0B4J279 112 aa14.87□□□□□ -0.03
CHRNA4-201ENST00000370263 ATXN8Q156A1 80 aa14.87□□□□□ -0.03
CHRNA4-201ENST00000370263 RBMY1BA6NDE4 496 aaKnown RBP14.87□□□□□ -0.03
CHRNA4-201ENST00000370263 RBMY1EA6NEQ0 496 aaKnown RBP14.87□□□□□ -0.03
CHRNA4-201ENST00000370263 SPINK8P0C7L1 97 aa14.87□□□□□ -0.03
CHRNA4-201ENST00000370263 RBMY1DP0C7P1 496 aaKnown RBP14.87□□□□□ -0.03
CHRNA4-201ENST00000370263 RBMY1A1P0DJD3 496 aaKnown RBP14.87□□□□□ -0.03
CHRNA4-201ENST00000370263 RBMY1CP0DJD4 496 aa14.87□□□□□ -0.03
CHRNA4-201ENST00000370263 ZNF581Q9P0T4 197 aa14.87□□□□□ -0.03
CHRNA4-201ENST00000370263 RTTNQ86VV8 2226 aa14.87□□□□□ -0.03
CHRNA4-201ENST00000370263 ZNF138P52744 262 aa14.86□□□□□ -0.03
CHRNA4-201ENST00000370263 BRCA1P38398 1863 aaKnown RBP14.86□□□□□ -0.03
CHRNA4-201ENST00000370263 PSPNO60542 156 aa14.86□□□□□ -0.03
CHRNA4-201ENST00000370263 FAM27E3Q08E93 113 aa14.86□□□□□ -0.03
CHRNA4-201ENST00000370263 SRSF6Q13247 344 aaKnown RBP14.86□□□□□ -0.03
CHRNA4-201ENST00000370263 Q6ZWC4 215 aa14.86□□□□□ -0.03
CHRNA4-201ENST00000370263 FAM231BA6NCW3 169 aa14.86□□□□□ -0.03
CHRNA4-201ENST00000370263 GFRA3O60609 400 aa14.86□□□□□ -0.03
CHRNA4-201ENST00000370263 SSBP2P81877 361 aaPredicted RBP14.86□□□□□ -0.03
CHRNA4-201ENST00000370263 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.86□□□□□ -0.03
CHRNA4-201ENST00000370263 EXOC3-AS1Q8N2X6 119 aa14.86□□□□□ -0.03
CHRNA4-201ENST00000370263 TRAV3A0A0B4J244 114 aa14.85□□□□□ -0.03
CHRNA4-201ENST00000370263 C17orf100A8MU93 164 aa14.85□□□□□ -0.03
CHRNA4-201ENST00000370263 TMPRSS3P57727 454 aa14.85□□□□□ -0.03
CHRNA4-201ENST00000370263 ANAPC10Q9UM13 185 aa14.85□□□□□ -0.03
CHRNA4-201ENST00000370263 TMEM155Q4W5P6 130 aa14.85□□□□□ -0.03
CHRNA4-201ENST00000370263 C18orf32Q8TCD1 76 aa14.85□□□□□ -0.03
CHRNA4-201ENST00000370263 MCRIP2Q9BUT9 160 aaKnown RBP14.85□□□□□ -0.03
CHRNA4-201ENST00000370263 TMEM133Q9H2Q1 129 aa14.85□□□□□ -0.03
CHRNA4-201ENST00000370263 PMS2P5A8MQ11 134 aa14.85□□□□□ -0.03
CHRNA4-201ENST00000370263 FXYD7P58549 80 aa14.85□□□□□ -0.03
CHRNA4-201ENST00000370263 CHAC1Q9BUX1 264 aa14.85□□□□□ -0.03
CHRNA4-201ENST00000370263 SLC25A39Q9BZJ4 359 aaPredicted RBP14.85□□□□□ -0.03
CHRNA4-201ENST00000370263 TRAV8-1A0A0A6YYK1 113 aa14.84□□□□□ -0.03
CHRNA4-201ENST00000370263 CLPSP04118 112 aa14.84□□□□□ -0.03
CHRNA4-201ENST00000370263 LHFPL4Q7Z7J7 247 aa14.84□□□□□ -0.03
CHRNA4-201ENST00000370263 SLC25A15Q9Y619 301 aa14.84□□□□□ -0.03
CHRNA4-201ENST00000370263 TMEM238C9JI98 176 aa14.84□□□□□ -0.03
CHRNA4-201ENST00000370263 YPEL3P61236 119 aaPredicted RBP14.84□□□□□ -0.03
CHRNA4-201ENST00000370263 ZC2HC1BQ5TFG8 222 aa14.84□□□□□ -0.03
CHRNA4-201ENST00000370263 ASCL4Q6XD76 172 aa14.84□□□□□ -0.03
CHRNA4-201ENST00000370263 TRGV9Q99603 122 aa14.84□□□□□ -0.03
CHRNA4-201ENST00000370263 NCOR1P1Q9H4R4 102 aa14.84□□□□□ -0.03
CHRNA4-201ENST00000370263 TOMM7Q9P0U1 55 aa14.84□□□□□ -0.03
CHRNA4-201ENST00000370263 RPUSD1Q9UJJ7 312 aaKnown RBP14.84□□□□□ -0.03
CHRNA4-201ENST00000370263 ESPL1Q14674 2120 aa14.83□□□□□ -0.03
CHRNA4-201ENST00000370263 M0R2P5 195 aa14.83□□□□□ -0.03
CHRNA4-201ENST00000370263 EPOPA6NHQ4 379 aa14.83□□□□□ -0.04
CHRNA4-201ENST00000370263 LINC00473A8K010 186 aa14.83□□□□□ -0.04
CHRNA4-201ENST00000370263 CD7P09564 240 aa14.83□□□□□ -0.04
CHRNA4-201ENST00000370263 FDCSPQ8NFU4 85 aa14.83□□□□□ -0.04
CHRNA4-201ENST00000370263 C10orf55Q5SWW7 151 aa14.83□□□□□ -0.04
CHRNA4-201ENST00000370263 RALGAPA1Q6GYQ0 2036 aa14.82□□□□□ -0.04
CHRNA4-201ENST00000370263 SCRT1Q9BWW7 348 aa14.82□□□□□ -0.04
CHRNA4-201ENST00000370263 PGPEP1Q9NXJ5 209 aa14.82□□□□□ -0.04
CHRNA4-201ENST00000370263 SPAG8Q99932 426 aaPredicted RBP14.82□□□□□ -0.04
CHRNA4-201ENST00000370263 GFRA4Q9GZZ7 299 aa14.82□□□□□ -0.04
CHRNA4-201ENST00000370263 MMP23AO75900 390 aa14.82□□□□□ -0.04
CHRNA4-201ENST00000370263 TOMM40O96008 361 aa14.82□□□□□ -0.04
CHRNA4-201ENST00000370263 SRRM5B3KS81 715 aa14.82□□□□□ -0.04
CHRNA4-201ENST00000370263 FNDC10F2Z333 226 aa14.82□□□□□ -0.04
CHRNA4-201ENST00000370263 DUX3Q96PT4 197 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms