RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 EPDR1Q9UM22 224 aa10.75□□□□□ -0.69
SPTSSB-201ENST00000359175 MRPL33O75394 65 aaKnown RBP10.75□□□□□ -0.69
SPTSSB-201ENST00000359175 CACNG7P62955 275 aa10.75□□□□□ -0.69
SPTSSB-201ENST00000359175 YRDCQ86U90 279 aaKnown RBP10.75□□□□□ -0.69
SPTSSB-201ENST00000359175 DDB2Q92466 427 aa10.75□□□□□ -0.69
SPTSSB-201ENST00000359175 S1PR3Q99500 378 aa10.75□□□□□ -0.69
SPTSSB-201ENST00000359175 TCRBV4S1A1TA0A5B7 111 aa10.75□□□□□ -0.69
SPTSSB-201ENST00000359175 MT-ATP8P03928 68 aa10.75□□□□□ -0.69
SPTSSB-201ENST00000359175 GNG5P63218 68 aa10.75□□□□□ -0.69
SPTSSB-201ENST00000359175 LCNL1Q6ZST4 164 aa10.75□□□□□ -0.69
SPTSSB-201ENST00000359175 GATD1Q8NB37 220 aa10.75□□□□□ -0.69
SPTSSB-201ENST00000359175 F11RQ9Y624 299 aaKnown RBP10.75□□□□□ -0.69
SPTSSB-201ENST00000359175 IGLL5B9A064 214 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 NPIPB6E9PJ23 425 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 H3BMG7 143 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 BRI3O95415 125 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 MOSP00540 346 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 KLRD1Q13241 179 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 PSMG4Q5JS54 123 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 OR13A1Q8NGR1 328 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 ITLN1Q8WWA0 313 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 ZNF714Q96N38 554 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 TM2D2Q9BX73 214 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 B4GALT7Q9UBV7 327 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 hADV38S2A0JD32 116 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 ACP1P24666 158 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 TCTAP57738 103 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 GAGE13Q4V321 117 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 OR9G1Q8NH87 305 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 RFESDQ8TAC1 157 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 FXYD5Q96DB9 178 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 FAM234AQ9H0X4 552 aa10.74□□□□□ -0.69
SPTSSB-201ENST00000359175 SPINT2O43291 252 aa10.73□□□□□ -0.69
SPTSSB-201ENST00000359175 LTAP01374 205 aa10.73□□□□□ -0.69
SPTSSB-201ENST00000359175 ATP5IP56385 69 aaPredicted RBP10.73□□□□□ -0.69
SPTSSB-201ENST00000359175 PLP2Q04941 152 aa10.73□□□□□ -0.69
SPTSSB-201ENST00000359175 OR5AN1Q8NGI8 311 aa10.73□□□□□ -0.69
SPTSSB-201ENST00000359175 DAZAP1Q96EP5 407 aaKnown RBP10.73□□□□□ -0.69
SPTSSB-201ENST00000359175 C15orf65H3BRN8 121 aa10.73□□□□□ -0.69
SPTSSB-201ENST00000359175 OVOL3O00110 214 aa10.73□□□□□ -0.69
SPTSSB-201ENST00000359175 CELA2AP08217 269 aa10.73□□□□□ -0.69
SPTSSB-201ENST00000359175 CACNG8Q8WXS5 425 aa10.73□□□□□ -0.69
SPTSSB-201ENST00000359175 PCOLCEQ15113 449 aa10.73□□□□□ -0.69
SPTSSB-201ENST00000359175 FMC1Q96HJ9 113 aa10.73□□□□□ -0.69
SPTSSB-201ENST00000359175 ZNF414Q96IQ9 312 aa10.73□□□□□ -0.69
SPTSSB-201ENST00000359175 SSR4P51571 173 aa10.72□□□□□ -0.69
SPTSSB-201ENST00000359175 Q6ZUT4 128 aa10.72□□□□□ -0.69
SPTSSB-201ENST00000359175 SYT8Q8NBV8 401 aa10.72□□□□□ -0.69
SPTSSB-201ENST00000359175 SMRP1Q8NCR6 262 aa10.72□□□□□ -0.69
SPTSSB-201ENST00000359175 CHAC1Q9BUX1 264 aa10.72□□□□□ -0.69
SPTSSB-201ENST00000359175 ASXL3Q9C0F0 2248 aa10.72□□□□□ -0.69
SPTSSB-201ENST00000359175 IGKV3D-15A0A087WSY6 115 aa10.72□□□□□ -0.69
SPTSSB-201ENST00000359175 SCRG1O75711 98 aa10.72□□□□□ -0.69
SPTSSB-201ENST00000359175 FAM106CPP0CH98 169 aa10.72□□□□□ -0.69
SPTSSB-201ENST00000359175 FOXG1P55316 489 aaPredicted RBP10.72□□□□□ -0.69
SPTSSB-201ENST00000359175 FAM106AQ4KMX7 169 aa10.72□□□□□ -0.69
SPTSSB-201ENST00000359175 C2orf83Q53S99 150 aa10.72□□□□□ -0.69
SPTSSB-201ENST00000359175 RPL39P5Q59GN2 51 aa10.72□□□□□ -0.69
SPTSSB-201ENST00000359175 SLC25A48Q6ZT89 311 aaKnown RBP10.72□□□□□ -0.69
SPTSSB-201ENST00000359175 FAM90A1Q86YD7 464 aa10.72□□□□□ -0.69
SPTSSB-201ENST00000359175 PRR7Q8TB68 274 aa10.72□□□□□ -0.69
SPTSSB-201ENST00000359175 SGK494Q96LW2 274 aa10.72□□□□□ -0.69
SPTSSB-201ENST00000359175 NHP2Q9NX24 153 aaKnown RBP10.72□□□□□ -0.69
SPTSSB-201ENST00000359175 MT-CO3P00414 261 aa10.71□□□□□ -0.69
SPTSSB-201ENST00000359175 SLC25A5P05141 298 aaKnown RBP10.71□□□□□ -0.69
SPTSSB-201ENST00000359175 IFI27P40305 119 aaPredicted RBP10.71□□□□□ -0.69
SPTSSB-201ENST00000359175 XGP55808 180 aa10.71□□□□□ -0.69
SPTSSB-201ENST00000359175 FOXI1Q12951 378 aa10.71□□□□□ -0.69
SPTSSB-201ENST00000359175 SRSF6Q13247 344 aaKnown RBP10.71□□□□□ -0.69
SPTSSB-201ENST00000359175 CEND1Q8N111 149 aa10.71□□□□□ -0.69
SPTSSB-201ENST00000359175 RNF208Q9H0X6 261 aa10.71□□□□□ -0.69
SPTSSB-201ENST00000359175 CACNA1DQ01668 2161 aa10.71□□□□□ -0.69
SPTSSB-201ENST00000359175 A0A1W2PR77 199 aa10.71□□□□□ -0.69
SPTSSB-201ENST00000359175 SRYQ05066 204 aa10.71□□□□□ -0.69
SPTSSB-201ENST00000359175 SRSF1Q07955 248 aaKnown RBP eCLIP10.71□□□□□ -0.69
SPTSSB-201ENST00000359175 FHL3Q13643 280 aa10.71□□□□□ -0.69
SPTSSB-201ENST00000359175 C10orf113Q5VZT2 155 aa10.71□□□□□ -0.69
SPTSSB-201ENST00000359175 OR1L4Q8NGR5 311 aa10.71□□□□□ -0.69
SPTSSB-201ENST00000359175 ATP6V0E2Q8NHE4 81 aa10.71□□□□□ -0.69
SPTSSB-201ENST00000359175 C16orf97H3BN30 126 aa10.71□□□□□ -0.7
SPTSSB-201ENST00000359175 COX7A2P2O60397 106 aa10.71□□□□□ -0.7
SPTSSB-201ENST00000359175 FSTL3O95633 263 aa10.71□□□□□ -0.7
SPTSSB-201ENST00000359175 PRCDQ00LT1 54 aa10.71□□□□□ -0.7
SPTSSB-201ENST00000359175 LOXL1Q08397 574 aaPredicted RBP10.71□□□□□ -0.7
SPTSSB-201ENST00000359175 IFI27L2Q9H2X8 130 aa10.71□□□□□ -0.7
SPTSSB-201ENST00000359175 PRNDQ9UKY0 176 aa10.71□□□□□ -0.7
SPTSSB-201ENST00000359175 A0A1B0GUT8 65 aa10.7□□□□□ -0.7
SPTSSB-201ENST00000359175 VSTM5A8MXK1 200 aa10.7□□□□□ -0.7
SPTSSB-201ENST00000359175 DLL1O00548 723 aa10.7□□□□□ -0.7
SPTSSB-201ENST00000359175 CD69Q07108 199 aa10.7□□□□□ -0.7
SPTSSB-201ENST00000359175 Q6ZS92 163 aa10.7□□□□□ -0.7
SPTSSB-201ENST00000359175 PDPNQ86YL7 162 aa10.7□□□□□ -0.7
SPTSSB-201ENST00000359175 ANAPC13Q9BS18 74 aa10.7□□□□□ -0.7
SPTSSB-201ENST00000359175 HINT2Q9BX68 163 aa10.7□□□□□ -0.7
SPTSSB-201ENST00000359175 A0A1B0GW15 77 aa10.7□□□□□ -0.7
SPTSSB-201ENST00000359175 B5MCH6 92 aa10.7□□□□□ -0.7
SPTSSB-201ENST00000359175 APOMO95445 188 aa10.7□□□□□ -0.7
SPTSSB-201ENST00000359175 RIGQ13278 110 aa10.7□□□□□ -0.7
SPTSSB-201ENST00000359175 MLANAQ16655 118 aa10.7□□□□□ -0.7
SPTSSB-201ENST00000359175 OSR1Q8TAX0 266 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms