RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 K7ENP7 123 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 NDUFS5O43920 106 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 IGHV4-59P01825 116 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 RPL32P62910 135 aaKnown RBP5.99□□□□□ -1.45
VPS13A-202ENST00000357409 IGHV4-28A0A0C4DH34 117 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 TM4SF5O14894 197 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 ESDP10768 282 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 C8orf86Q6ZUL3 223 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 DLX4Q92988 240 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-202ENST00000357409 CENPFP49454 3210 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 NINQ8N4C6 2090 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 A8MXK9 166 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 NDUFB8O95169 186 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 IGHV3-30P01768 117 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 IGHV3-33P01772 117 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 IGHV3-30-3P0DP02 117 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 IGHV3-30-5P0DP03 117 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 COX5BP10606 129 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 C1orf100Q5SVJ3 147 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 WFDC1Q9HC57 220 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 MYO5AQ9Y4I1 1855 aaKnown RBP5.99□□□□□ -1.45
VPS13A-202ENST00000357409 PIKFYVEQ9Y2I7 2098 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 PCM1Q15154 2024 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 TRAV8-3A0A0A6YYJ7 113 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 LCN12Q6JVE5 192 aa5.99□□□□□ -1.45
VPS13A-202ENST00000357409 LINC00473A8K010 186 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 CYSLTR1Q9Y271 337 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 ZNF236Q9UL36 1845 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 PQLC2LA1A4F0 135 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 D6R8Y8 96 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 RPP25LQ8N5L8 163 aaKnown RBP5.98□□□□□ -1.45
VPS13A-202ENST00000357409 FLVCR1-AS1Q8TAF5 88 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 ZMAT4Q9H898 229 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 PLSCR4Q9NRQ2 329 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 DUTP33316 252 aaKnown RBP5.98□□□□□ -1.45
VPS13A-202ENST00000357409 SAMD13Q5VXD3 122 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 TEX38Q6PEX7 206 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 SDHCQ99643 169 aaPredicted RBP5.98□□□□□ -1.45
VPS13A-202ENST00000357409 RNF126Q9BV68 326 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 SMAGPQ0VAQ4 97 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 ZNF497Q6ZNH5 498 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 YPEL1O60688 119 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 YPEL2Q96QA6 119 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 RPP21Q9H633 154 aaKnown RBP5.98□□□□□ -1.45
VPS13A-202ENST00000357409 PEF1Q9UBV8 284 aaKnown RBP5.98□□□□□ -1.45
VPS13A-202ENST00000357409 ZNF503-AS2A6NEH8 195 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 NTF4P34130 210 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 DEFB1P60022 68 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 TMEM75Q8N9X5 138 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 GAFA1Q96PS6 74 aa5.98□□□□□ -1.45
VPS13A-202ENST00000357409 ZNF362Q5T0B9 420 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-202ENST00000357409 CSTL1Q9H114 145 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 RNF114Q9Y508 228 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 CKAP5Q14008 2032 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 AZU1P20160 251 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 NR2C2APQ86WQ0 139 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 AMN1Q8IY45 258 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 C15orf61A6NNL5 157 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 RPS20P60866 119 aaKnown RBP5.97□□□□□ -1.45
VPS13A-202ENST00000357409 MEF2CQ06413 473 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-202ENST00000357409 TCTEX1D4Q5JR98 221 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 IFNL4K9M1U5 179 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 ANGP03950 147 aaKnown RBP5.97□□□□□ -1.45
VPS13A-202ENST00000357409 FSTP19883 344 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 C10orf126Q8N4M7 172 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 C17orf77Q96MU5 243 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 DUSP14O95147 198 aaKnown RBP5.97□□□□□ -1.45
VPS13A-202ENST00000357409 SLC25A16P16260 332 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 JOSD1Q15040 202 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-202ENST00000357409 ORMDL3Q8N138 153 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 MMP23AO75900 390 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 ARMS2P0C7Q2 107 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 RAG2P55895 527 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 PKIAP61925 76 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 SPSB3Q6PJ21 355 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 TMEM250H0YL14 139 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 OCIAD2Q56VL3 154 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 TEX36Q5VZQ5 186 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 H7C1H1 209 aa5.97□□□□□ -1.45
VPS13A-202ENST00000357409 GPX4P36969 197 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-202ENST00000357409 A0A096LNI7 61 aa5.96□□□□□ -1.45
VPS13A-202ENST00000357409 ZNF561-AS1K7EIQ3 104 aa5.96□□□□□ -1.45
VPS13A-202ENST00000357409 MRPL32Q9BYC8 188 aaKnown RBP5.96□□□□□ -1.45
VPS13A-202ENST00000357409 IGKV1D-17A0A075B6S4 117 aa5.96□□□□□ -1.45
VPS13A-202ENST00000357409 SH2D1AO60880 128 aa5.96□□□□□ -1.45
VPS13A-202ENST00000357409 RPL36AP83881 106 aaKnown RBP5.96□□□□□ -1.45
VPS13A-202ENST00000357409 TMEM144Q7Z5S9 345 aa5.96□□□□□ -1.45
VPS13A-202ENST00000357409 RPL36ALQ969Q0 106 aaKnown RBP5.96□□□□□ -1.45
VPS13A-202ENST00000357409 DANCRP0C864 163 aa5.96□□□□□ -1.46
VPS13A-202ENST00000357409 HIST1H2BAQ96A08 127 aa5.96□□□□□ -1.46
VPS13A-202ENST00000357409 TRPM6Q9BX84 2022 aa5.96□□□□□ -1.46
VPS13A-202ENST00000357409 M0R2N4 97 aa5.96□□□□□ -1.46
VPS13A-202ENST00000357409 IFITM2Q01629 132 aa5.96□□□□□ -1.46
VPS13A-202ENST00000357409 WIPF3A6NGB9 483 aa5.96□□□□□ -1.46
VPS13A-202ENST00000357409 SAXO1Q8IYX7 474 aa5.96□□□□□ -1.46
VPS13A-202ENST00000357409 ANAPC10Q9UM13 185 aa5.96□□□□□ -1.46
VPS13A-202ENST00000357409 IGHV4-30-2A0A087WSY4 118 aa5.96□□□□□ -1.46
VPS13A-202ENST00000357409 IGHMP01871 453 aa5.96□□□□□ -1.46
VPS13A-202ENST00000357409 TAL2Q16559 108 aa5.96□□□□□ -1.46
VPS13A-202ENST00000357409 DKK4Q9UBT3 224 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms