RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 IL4P05112 153 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 PPIAL4FP0DN26 164 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 OR9G1Q8NH87 305 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 LINC00479Q96M42 142 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 FOXC2Q99958 501 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 CCL3L1P16619 93 aa11.62□□□□□ -0.55
SREBF1-202ENST00000355815 IL15RAQ13261 267 aa11.62□□□□□ -0.55
SREBF1-202ENST00000355815 PRELID3AQ96N28 172 aa11.62□□□□□ -0.55
SREBF1-202ENST00000355815 ANAPC10Q9UM13 185 aa11.62□□□□□ -0.55
SREBF1-202ENST00000355815 TRAV3A0A0B4J244 114 aa11.62□□□□□ -0.55
SREBF1-202ENST00000355815 ASCL4Q6XD76 172 aa11.62□□□□□ -0.55
SREBF1-202ENST00000355815 MDS2Q8NDY4 140 aa11.62□□□□□ -0.55
SREBF1-202ENST00000355815 TIMD4Q96H15 378 aa11.62□□□□□ -0.55
SREBF1-202ENST00000355815 LINC00473A8K010 186 aa11.62□□□□□ -0.55
SREBF1-202ENST00000355815 Q6P435 159 aa11.62□□□□□ -0.55
SREBF1-202ENST00000355815 TTC9CQ8N5M4 171 aa11.62□□□□□ -0.55
SREBF1-202ENST00000355815 RNASE8Q8TDE3 154 aaKnown RBP11.62□□□□□ -0.55
SREBF1-202ENST00000355815 SSC4DQ8WTU2 575 aa11.62□□□□□ -0.55
SREBF1-202ENST00000355815 RNF138Q8WVD3 245 aa11.62□□□□□ -0.55
SREBF1-202ENST00000355815 MAP1LC3AQ9H492 121 aa11.62□□□□□ -0.55
SREBF1-202ENST00000355815 TRAV1-1A0A0B4J248 108 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 OR11H12B2RN74 326 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 CD24P25063 80 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 HERVK_113P61574 105 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 SELENOTP62341 195 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 FOXL1Q12952 345 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 ZNF585BQ52M93 769 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 OR11H1Q8NG94 326 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 OR11H2Q8NH07 326 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 ORAOV1Q8WV07 137 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 GRAMD2BQ96HH9 432 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 COL6A3P12111 3177 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 IGHV1-18A0A0C4DH31 117 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 A0A1B0GUT8 65 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 A0A1B0GW64 132 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 FOXI3A8MTJ6 420 aaPredicted RBP11.61□□□□□ -0.55
SREBF1-202ENST00000355815 IQCF6A8MYZ5 107 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 CRXO43186 299 aaPredicted RBP11.61□□□□□ -0.55
SREBF1-202ENST00000355815 OR9G9P0C7N8 305 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 LYL1P12980 280 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 TMEM186Q96B77 213 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 AGMATQ9BSE5 352 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 WDR83OSQ9Y284 106 aa11.61□□□□□ -0.55
SREBF1-202ENST00000355815 IGHV3-49A0A0A0MS15 119 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 FAM181BA6NEQ2 426 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 LYNX1G3V0Z9 82 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 GOSR1O95249 250 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 LYNX1P0DP58 116 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 DEFB104AQ8WTQ1 72 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 GNB1LQ9BYB4 327 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 ZNF256Q9Y2P7 627 aaPredicted RBP11.6□□□□□ -0.55
SREBF1-202ENST00000355815 TRBV20OR9-2A0A075B6H5 130 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 DLL1O00548 723 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 LCNL1Q6ZST4 164 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 COQ2Q96H96 371 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 PTPN13Q12923 2485 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 F2Z2F3 143 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 IGKV1-39P01597 117 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 IGKV1D-39P04432 117 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 CRIP3Q6Q6R5 217 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 SCNM1Q9BWG6 230 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 TRAV30A0A087WSZ9 112 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 A0A0G2JLM5 398 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 PAX9P55771 341 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 WFDC12Q8WWY7 111 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 C20orf144Q9BQM9 153 aa11.6□□□□□ -0.55
SREBF1-202ENST00000355815 PPIFP30405 207 aaKnown RBP11.59□□□□□ -0.55
SREBF1-202ENST00000355815 CD177Q8N6Q3 437 aa11.59□□□□□ -0.55
SREBF1-202ENST00000355815 ZNF114Q8NC26 417 aa11.59□□□□□ -0.55
SREBF1-202ENST00000355815 TMEM238LA0A1B0GVL6 79 aa11.59□□□□□ -0.55
SREBF1-202ENST00000355815 A6NJY4 79 aa11.59□□□□□ -0.55
SREBF1-202ENST00000355815 NDUFA3O95167 84 aa11.59□□□□□ -0.55
SREBF1-202ENST00000355815 GUSBP1Q15486 140 aa11.59□□□□□ -0.55
SREBF1-202ENST00000355815 DGAT2L7PQ6IED9 249 aa11.59□□□□□ -0.55
SREBF1-202ENST00000355815 TREML4Q6UXN2 200 aa11.59□□□□□ -0.55
SREBF1-202ENST00000355815 RPP21Q9H633 154 aaKnown RBP11.59□□□□□ -0.55
SREBF1-202ENST00000355815 IGLC2P0DOY2 106 aa11.59□□□□□ -0.55
SREBF1-202ENST00000355815 IGLC3P0DOY3 106 aa11.59□□□□□ -0.55
SREBF1-202ENST00000355815 WT1P19544 449 aaPredicted RBP11.59□□□□□ -0.55
SREBF1-202ENST00000355815 HIST1H1AQ02539 215 aaPredicted RBP11.59□□□□□ -0.55
SREBF1-202ENST00000355815 ABHD17AQ96GS6 310 aa11.59□□□□□ -0.55
SREBF1-202ENST00000355815 DSCAML1Q8TD84 2053 aa11.59□□□□□ -0.55
SREBF1-202ENST00000355815 ZNF714Q96N38 554 aa11.58□□□□□ -0.56
SREBF1-202ENST00000355815 ASCL2Q99929 193 aa11.58□□□□□ -0.56
SREBF1-202ENST00000355815 GGTLC1Q9BX51 225 aa11.58□□□□□ -0.56
SREBF1-202ENST00000355815 IGHV1-69-2A0A0G2JMI3 117 aa11.58□□□□□ -0.56
SREBF1-202ENST00000355815 ITGB1BP1O14713 200 aa11.58□□□□□ -0.56
SREBF1-202ENST00000355815 RNASEH2CQ8TDP1 164 aaKnown RBP11.58□□□□□ -0.56
SREBF1-202ENST00000355815 IGKV3-15P01624 115 aa11.58□□□□□ -0.56
SREBF1-202ENST00000355815 SAMD5Q5TGI4 173 aa11.58□□□□□ -0.56
SREBF1-202ENST00000355815 Q6ZPA2 131 aa11.58□□□□□ -0.56
SREBF1-202ENST00000355815 OSTCQ9NRP0 149 aa11.58□□□□□ -0.56
SREBF1-202ENST00000355815 A0A1W2PS18 150 aa11.57□□□□□ -0.56
SREBF1-202ENST00000355815 NUPR1O60356 82 aa11.57□□□□□ -0.56
SREBF1-202ENST00000355815 DUX4L9Q6RFH8 374 aaPredicted RBP11.57□□□□□ -0.56
SREBF1-202ENST00000355815 LINC01560Q8TB33 94 aa11.57□□□□□ -0.56
SREBF1-202ENST00000355815 IGKV1D-33P01593 117 aa11.57□□□□□ -0.56
SREBF1-202ENST00000355815 IGKV1-33P01594 117 aa11.57□□□□□ -0.56
SREBF1-202ENST00000355815 ZNF146Q15072 292 aa11.57□□□□□ -0.56
SREBF1-202ENST00000355815 ZNF726P1Q15940 193 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms