RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 C21orf62-AS1Q17RA5 79 aa8.96□□□□□ -0.98
CLCN6-202ENST00000346436 Q6ZRM9 215 aa8.96□□□□□ -0.98
CLCN6-202ENST00000346436 A0A087WWC5 75 aa8.96□□□□□ -0.98
CLCN6-202ENST00000346436 HLA-DRB1P01911 266 aa8.96□□□□□ -0.98
CLCN6-202ENST00000346436 IGFBP2P18065 325 aa8.96□□□□□ -0.98
CLCN6-202ENST00000346436 RPL35AP18077 110 aaKnown RBP8.96□□□□□ -0.98
CLCN6-202ENST00000346436 BTF3P20290 206 aaKnown RBP8.96□□□□□ -0.98
CLCN6-202ENST00000346436 NMSQ5H8A3 153 aa8.96□□□□□ -0.98
CLCN6-202ENST00000346436 ZNF497Q6ZNH5 498 aa8.96□□□□□ -0.98
CLCN6-202ENST00000346436 TRBV7-1A0A0A6YYK4 115 aa8.95□□□□□ -0.98
CLCN6-202ENST00000346436 IGHV1-69DA0A0B4J2H0 117 aa8.95□□□□□ -0.98
CLCN6-202ENST00000346436 NAPSAO96009 420 aa8.95□□□□□ -0.98
CLCN6-202ENST00000346436 IGHV1-69P01742 117 aa8.95□□□□□ -0.98
CLCN6-202ENST00000346436 PRB4P10163 310 aaPredicted RBP8.95□□□□□ -0.98
CLCN6-202ENST00000346436 MYO7BQ6PIF6 2116 aa8.95□□□□□ -0.98
CLCN6-202ENST00000346436 IGKV1-5P01602 117 aa8.95□□□□□ -0.98
CLCN6-202ENST00000346436 PRTN3P24158 256 aa8.95□□□□□ -0.98
CLCN6-202ENST00000346436 GCHFRP30047 84 aa8.95□□□□□ -0.98
CLCN6-202ENST00000346436 RNASE4P34096 147 aaKnown RBP8.95□□□□□ -0.98
CLCN6-202ENST00000346436 UBE2E1P51965 193 aa8.95□□□□□ -0.98
CLCN6-202ENST00000346436 LINC00305Q7Z4B0 112 aa8.95□□□□□ -0.98
CLCN6-202ENST00000346436 E7EQL1 145 aa8.95□□□□□ -0.98
CLCN6-202ENST00000346436 LINC01619G3V211 115 aa8.95□□□□□ -0.98
CLCN6-202ENST00000346436 NABP2Q9BQ15 211 aa8.95□□□□□ -0.98
CLCN6-202ENST00000346436 TMEM250H0YL14 139 aa8.95□□□□□ -0.98
CLCN6-202ENST00000346436 WDR87Q6ZQQ6 2873 aa8.95□□□□□ -0.98
CLCN6-202ENST00000346436 TRAV8-6A0A0B4J262 113 aa8.94□□□□□ -0.98
CLCN6-202ENST00000346436 PSMG4Q5JS54 123 aa8.94□□□□□ -0.98
CLCN6-202ENST00000346436 ZNF474Q6S9Z5 364 aaPredicted RBP8.94□□□□□ -0.98
CLCN6-202ENST00000346436 TMEM190Q8WZ59 177 aa8.94□□□□□ -0.98
CLCN6-202ENST00000346436 C15orf61A6NNL5 157 aa8.94□□□□□ -0.98
CLCN6-202ENST00000346436 FOLR2P14207 255 aa8.94□□□□□ -0.98
CLCN6-202ENST00000346436 SRIP30626 198 aa8.94□□□□□ -0.98
CLCN6-202ENST00000346436 PRR31Q5SQ13 230 aa8.94□□□□□ -0.98
CLCN6-202ENST00000346436 DMRTC2Q8IXT2 367 aaPredicted RBP8.94□□□□□ -0.98
CLCN6-202ENST00000346436 PRELID3AQ96N28 172 aa8.94□□□□□ -0.98
CLCN6-202ENST00000346436 S4R3C0 116 aa8.94□□□□□ -0.98
CLCN6-202ENST00000346436 ZNF815PA8K554 130 aa8.94□□□□□ -0.98
CLCN6-202ENST00000346436 INSP01308 110 aa8.94□□□□□ -0.98
CLCN6-202ENST00000346436 RPLP1P05386 114 aaKnown RBP8.94□□□□□ -0.98
CLCN6-202ENST00000346436 LGALS3P17931 250 aaKnown RBP8.94□□□□□ -0.98
CLCN6-202ENST00000346436 CENPWQ5EE01 88 aa8.94□□□□□ -0.98
CLCN6-202ENST00000346436 GOLT1AQ6ZVE7 132 aa8.94□□□□□ -0.98
CLCN6-202ENST00000346436 IGKV1-6A0A0C4DH72 117 aa8.94□□□□□ -0.98
CLCN6-202ENST00000346436 NUP210Q8TEM1 1887 aaPredicted RBP8.94□□□□□ -0.98
CLCN6-202ENST00000346436 TAS2R60P59551 318 aa8.94□□□□□ -0.98
CLCN6-202ENST00000346436 MAPK1IP1LQ8NDC0 245 aa8.94□□□□□ -0.98
CLCN6-202ENST00000346436 PROK2Q9HC23 129 aa8.94□□□□□ -0.98
CLCN6-202ENST00000346436 CBY1Q9Y3M2 126 aa8.94□□□□□ -0.98
CLCN6-202ENST00000346436 SAA2-SAA4A0A096LPE2 208 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 TRAV21A0A0B4J279 112 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 TMEM238LA0A1B0GVL6 79 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 A6NJY4 79 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 UPK2O00526 184 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 SAA1P0DJI8 122 aaPredicted RBP8.93□□□□□ -0.98
CLCN6-202ENST00000346436 SAA2P0DJI9 122 aaPredicted RBP8.93□□□□□ -0.98
CLCN6-202ENST00000346436 C1QL4Q86Z23 238 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 OR4C5Q8NGB2 326 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 CHCHD5Q9BSY4 110 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 PEF1Q9UBV8 284 aaKnown RBP8.93□□□□□ -0.98
CLCN6-202ENST00000346436 PKIGQ9Y2B9 76 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 C2orf16Q68DN1 1984 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 TMEM50AO95807 157 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 CD7P09564 240 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 SAA4P35542 130 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 MIR17HGQ75NE6 70 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 REC114Q7Z4M0 266 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 RPP25LQ8N5L8 163 aaKnown RBP8.93□□□□□ -0.98
CLCN6-202ENST00000346436 VPS25Q9BRG1 176 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 DERL1Q9BUN8 251 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 RBFOX2O43251 390 aaKnown RBP eCLIP8.93□□□□□ -0.98
CLCN6-202ENST00000346436 SELLP14151 372 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 CD81P60033 236 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 ASCL2Q99929 193 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 PYY3Q5JQD4 70 aa8.93□□□□□ -0.98
CLCN6-202ENST00000346436 CD24P25063 80 aa8.92□□□□□ -0.98
CLCN6-202ENST00000346436 SPATA45Q537H7 98 aa8.92□□□□□ -0.98
CLCN6-202ENST00000346436 SIGLEC15Q6ZMC9 328 aa8.92□□□□□ -0.98
CLCN6-202ENST00000346436 RAB37Q96AX2 223 aa8.92□□□□□ -0.98
CLCN6-202ENST00000346436 STAG3L2P0CL84 134 aa8.92□□□□□ -0.98
CLCN6-202ENST00000346436 COL8A2P25067 703 aa8.92□□□□□ -0.98
CLCN6-202ENST00000346436 LHFPL4Q7Z7J7 247 aa8.92□□□□□ -0.98
CLCN6-202ENST00000346436 OR13C6PQ8NH95 151 aa8.92□□□□□ -0.98
CLCN6-202ENST00000346436 HIST1H2BLQ99880 126 aa8.92□□□□□ -0.98
CLCN6-202ENST00000346436 LINC00527Q9UJ94 153 aa8.92□□□□□ -0.98
CLCN6-202ENST00000346436 M0R381 172 aa8.92□□□□□ -0.98
CLCN6-202ENST00000346436 NDUFS6O75380 124 aaKnown RBP8.92□□□□□ -0.98
CLCN6-202ENST00000346436 HIST3H2BBQ8N257 126 aa8.92□□□□□ -0.98
CLCN6-202ENST00000346436 SPSB4Q96A44 273 aa8.92□□□□□ -0.98
CLCN6-202ENST00000346436 SEPSECSQ9HD40 501 aaKnown RBP8.92□□□□□ -0.98
CLCN6-202ENST00000346436 SOX21Q9Y651 276 aaPredicted RBP8.92□□□□□ -0.98
CLCN6-202ENST00000346436 LOC102724200A0A096LPH7 203 aaPredicted RBP8.92□□□□□ -0.98
CLCN6-202ENST00000346436 KLRD1Q13241 179 aa8.92□□□□□ -0.98
CLCN6-202ENST00000346436 GTF3AQ92664 365 aaKnown RBP8.92□□□□□ -0.98
CLCN6-202ENST00000346436 RNF125Q96EQ8 232 aa8.92□□□□□ -0.98
CLCN6-202ENST00000346436 ANAPC10Q9UM13 185 aa8.92□□□□□ -0.98
CLCN6-202ENST00000346436 NBEAP1P0C6P0 100 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 EFNB3Q15768 340 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 IGHV2-70DA0A0C4DH43 119 aa8.91□□□□□ -0.98
CLCN6-202ENST00000346436 LY6G6EA0A0G2JKS1 128 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms