RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 TANC2Q9HCD6 1990 aa10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 TRBV20OR9-2A0A075B6H5 130 aa10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 PPIAL4CA0A0B4J2A2 164 aa10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 PPIAL4GP0DN37 164 aa10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 CX3CL1P78423 397 aa10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 C12orf54Q6X4T0 127 aa10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 CIARTQ8N365 385 aaPredicted RBP10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 RNASEH2CQ8TDP1 164 aaKnown RBP10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 TMEM186Q96B77 213 aa10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 CLEC7AQ9BXN2 247 aa10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 RPUSD1Q9UJJ7 312 aaKnown RBP10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 CCDC168Q8NDH2 2452 aa10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 CCL21O00585 134 aa10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 KLF17Q5JT82 389 aaPredicted RBP10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 NUP35Q8NFH5 326 aa10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 RAB1CQ92928 201 aa10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 RCHY1Q96PM5 261 aa10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 MAJINQ3KP22 176 aa10.16□□□□□ -0.78
SNRNP48-201ENST00000342415 Q8NFD4 153 aa10.16□□□□□ -0.78
SNRNP48-201ENST00000342415 LOXL4Q96JB6 756 aa10.16□□□□□ -0.78
SNRNP48-201ENST00000342415 LSM4Q9Y4Z0 139 aaKnown RBP10.16□□□□□ -0.78
SNRNP48-201ENST00000342415 A0A1W2PS18 150 aa10.16□□□□□ -0.78
SNRNP48-201ENST00000342415 OR4A5Q8NH83 315 aa10.16□□□□□ -0.78
SNRNP48-201ENST00000342415 LTBP2Q14767 1821 aa10.16□□□□□ -0.78
SNRNP48-201ENST00000342415 ZNF207O43670 478 aaKnown RBP10.16□□□□□ -0.78
SNRNP48-201ENST00000342415 PPIFP30405 207 aaKnown RBP10.16□□□□□ -0.78
SNRNP48-201ENST00000342415 CACNG8Q8WXS5 425 aa10.16□□□□□ -0.78
SNRNP48-201ENST00000342415 GGTLC3B5MD39 225 aa10.15□□□□□ -0.78
SNRNP48-201ENST00000342415 F5H697 171 aa10.15□□□□□ -0.78
SNRNP48-201ENST00000342415 TRAV9-2A0A087WT02 112 aa10.15□□□□□ -0.78
SNRNP48-201ENST00000342415 CEACAM3P40198 252 aa10.15□□□□□ -0.78
SNRNP48-201ENST00000342415 MPV17L2Q567V2 206 aa10.15□□□□□ -0.78
SNRNP48-201ENST00000342415 C1orf162Q8NEQ5 155 aaPredicted RBP10.15□□□□□ -0.78
SNRNP48-201ENST00000342415 OR10AG1Q8NH19 301 aa10.15□□□□□ -0.78
SNRNP48-201ENST00000342415 TSKUQ8WUA8 353 aa10.15□□□□□ -0.78
SNRNP48-201ENST00000342415 SETD2Q9BYW2 2564 aaPredicted RBP10.15□□□□□ -0.78
SNRNP48-201ENST00000342415 NAV3Q8IVL0 2385 aa10.15□□□□□ -0.78
SNRNP48-201ENST00000342415 A0A1B0GUT8 65 aa10.15□□□□□ -0.78
SNRNP48-201ENST00000342415 C17orf100A8MU93 164 aa10.15□□□□□ -0.78
SNRNP48-201ENST00000342415 K7EN84 100 aa10.15□□□□□ -0.78
SNRNP48-201ENST00000342415 IGLV2-14P01704 120 aa10.15□□□□□ -0.78
SNRNP48-201ENST00000342415 KHDC1LQ5JSQ8 128 aa10.15□□□□□ -0.78
SNRNP48-201ENST00000342415 ALKBH7Q9BT30 221 aaPredicted RBP10.15□□□□□ -0.78
SNRNP48-201ENST00000342415 LINC00312Q9Y6C7 94 aa10.15□□□□□ -0.78
SNRNP48-201ENST00000342415 IGHV1-69-2A0A0G2JMI3 117 aa10.15□□□□□ -0.79
SNRNP48-201ENST00000342415 TCRBV4S1A1TA0A5B7 111 aa10.15□□□□□ -0.79
SNRNP48-201ENST00000342415 K7ERU9 68 aa10.15□□□□□ -0.79
SNRNP48-201ENST00000342415 LIPFP07098 398 aa10.15□□□□□ -0.79
SNRNP48-201ENST00000342415 VDAC2P45880 294 aaPredicted RBP10.15□□□□□ -0.79
SNRNP48-201ENST00000342415 SLAQ13239 276 aa10.15□□□□□ -0.79
SNRNP48-201ENST00000342415 ZNF295-AS1Q8N0V1 137 aa10.15□□□□□ -0.79
SNRNP48-201ENST00000342415 FAM168AQ92567 244 aa10.15□□□□□ -0.79
SNRNP48-201ENST00000342415 C7orf71A4D174 169 aa10.14□□□□□ -0.79
SNRNP48-201ENST00000342415 C9JCJ5 164 aa10.14□□□□□ -0.79
SNRNP48-201ENST00000342415 IGKV3-15P01624 115 aa10.14□□□□□ -0.79
SNRNP48-201ENST00000342415 LINC00614P0C842 121 aa10.14□□□□□ -0.79
SNRNP48-201ENST00000342415 RELQ04864 619 aaPredicted RBP10.14□□□□□ -0.79
SNRNP48-201ENST00000342415 SPRNQ5BIV9 151 aa10.14□□□□□ -0.79
SNRNP48-201ENST00000342415 LDLRAD2Q5SZI1 272 aa10.14□□□□□ -0.79
SNRNP48-201ENST00000342415 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.14□□□□□ -0.79
SNRNP48-201ENST00000342415 C11orf1Q9H5F2 150 aa10.14□□□□□ -0.79
SNRNP48-201ENST00000342415 TRAV9-1A0A075B6T8 112 aa10.14□□□□□ -0.79
SNRNP48-201ENST00000342415 LMO1P25800 156 aa10.14□□□□□ -0.79
SNRNP48-201ENST00000342415 LGALS7P47929 136 aa10.14□□□□□ -0.79
SNRNP48-201ENST00000342415 ZFP30Q9Y2G7 519 aa10.14□□□□□ -0.79
SNRNP48-201ENST00000342415 SPANXN1Q5VSR9 72 aa10.14□□□□□ -0.79
SNRNP48-201ENST00000342415 RBPMS2Q6ZRY4 209 aaKnown RBP10.14□□□□□ -0.79
SNRNP48-201ENST00000342415 ASCL5Q7RTU5 278 aa10.14□□□□□ -0.79
SNRNP48-201ENST00000342415 ABHD17AQ96GS6 310 aa10.14□□□□□ -0.79
SNRNP48-201ENST00000342415 TLN2Q9Y4G6 2542 aa10.13□□□□□ -0.79
SNRNP48-201ENST00000342415 A6NDN8 102 aa10.13□□□□□ -0.79
SNRNP48-201ENST00000342415 TYMSP04818 313 aa10.13□□□□□ -0.79
SNRNP48-201ENST00000342415 ZNF883P0CG24 379 aa10.13□□□□□ -0.79
SNRNP48-201ENST00000342415 HTN1P15515 57 aa10.13□□□□□ -0.79
SNRNP48-201ENST00000342415 C2orf83Q53S99 150 aa10.13□□□□□ -0.79
SNRNP48-201ENST00000342415 Q6ZSR3 168 aa10.13□□□□□ -0.79
SNRNP48-201ENST00000342415 SLC25A15Q9Y619 301 aa10.13□□□□□ -0.79
SNRNP48-201ENST00000342415 SRRM4A7MD48 611 aaKnown RBP10.13□□□□□ -0.79
SNRNP48-201ENST00000342415 PMS2P5A8MQ11 134 aa10.13□□□□□ -0.79
SNRNP48-201ENST00000342415 ZNF474Q6S9Z5 364 aaPredicted RBP10.13□□□□□ -0.79
SNRNP48-201ENST00000342415 C5orf30Q96GV9 206 aa10.13□□□□□ -0.79
SNRNP48-201ENST00000342415 FAM181BA6NEQ2 426 aa10.13□□□□□ -0.79
SNRNP48-201ENST00000342415 RNASE2P10153 161 aaKnown RBP10.13□□□□□ -0.79
SNRNP48-201ENST00000342415 OR10J3Q5JRS4 329 aa10.13□□□□□ -0.79
SNRNP48-201ENST00000342415 TMEM131Q92545 1883 aa10.13□□□□□ -0.79
SNRNP48-201ENST00000342415 A0A087X0K7 114 aa10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 M0R3E3 92 aa10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 LY6HO94772 140 aa10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 DIAPH2-AS1Q14236 149 aa10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 TMEM200BQ69YZ2 307 aa10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 LYPD2Q6UXB3 125 aa10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 SPTBN4Q9H254 2564 aa10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 MGPP08493 103 aa10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 SCGB1D4Q6XE38 83 aa10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 C11orf53Q8IXP5 236 aa10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 PLSCR4Q9NRQ2 329 aa10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 V9GYV3 84 aa10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 CHD8Q9HCK8 2581 aa10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 C15orf65H3BRN8 121 aa10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 TM4SF5O14894 197 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms